pycom520g00990

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_520
Physical Location & Seq
Forward (+)
769995 .. 770195
201 bp
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UTR
Exon/CDS
Intron
pycom520g00990.1

Sequence Viewer

Length: 201 bp
ATGGCCTTGATCTTTGATTGGTCTACTTCAATACCACGGTGCTTGACGATGAAGCCGAGGAATTTTCCAGAGGTGACGCCAAACGCACACTTTAACGGGTTCATCTTGAGGTTGTATTTTCGCAGCCTTTCAAACACTATTCGTAGATCCTTCAAGTGGTCTGATCTTTTCTTCGTCTTAACCACCACATCATCTACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

67

Amino Acids

7.78

Weight (kDa)

10.84

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 23
AclWI GGATC 1 cut(s) 141
AcsI RAATTY 1 cut(s) 61
AcyI GRCGYC 1 cut(s) 77
AfiI CCNNNNNNNGG 1 cut(s) 156
AgsI TTSAA 3 cut(s) 30, 132, 154
AlwI GGATC 1 cut(s) 141
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 123
ApoI RAATTY 1 cut(s) 61
AsuHPI GGTGA 1 cut(s) 85
BbvI GCAGC 1 cut(s) 135
BisI GCNGC 1 cut(s) 124
BlsI GCNGC 1 cut(s) 125
BpuEI CTTGAG 1 cut(s) 127
BsaAI YACGTR 1 cut(s) 198
BsaHI GRCGYC 1 cut(s) 77
BsaJI CCNNGG 2 cut(s) 35, 56
Bsc4I CCNNNNNNNGG 1 cut(s) 156
BseDI CCNNGG 2 cut(s) 35, 56
BseLI CCNNNNNNNGG 1 cut(s) 156
BseXI GCAGC 1 cut(s) 135
BshFI GGCC 1 cut(s) 5
BslI CCNNNNNNNGG 1 cut(s) 156
BsnI GGCC 1 cut(s) 5
Bsp143I GATC 3 cut(s) 9, 146, 163
BspANI GGCC 1 cut(s) 5
BspPI GGATC 1 cut(s) 141
BssECI CCNNGG 2 cut(s) 35, 56
BssMI GATC 3 cut(s) 9, 146, 163
BssNI GRCGYC 1 cut(s) 77
Bst4CI ACNGT 1 cut(s) 39
BstACI GRCGYC 1 cut(s) 77
BstBAI YACGTR 1 cut(s) 198
BstDSI CCRYGG 1 cut(s) 35
BstKTI GATC 3 cut(s) 12, 149, 166
BstMBI GATC 3 cut(s) 9, 146, 163
BstSNI TACGTA 1 cut(s) 198
BstV1I GCAGC 1 cut(s) 135
BstX2I RGATCY 1 cut(s) 146
BstYI RGATCY 1 cut(s) 146
BsuRI GGCC 1 cut(s) 5
BtgI CCRYGG 1 cut(s) 35
CseI GACGC 1 cut(s) 85
CspCI CAANNNNNGTGG 2 cut(s) 24, 59
CviJI RGCY 3 cut(s) 5, 55, 126
CviKI_1 RGCY 3 cut(s) 5, 55, 126
DpnI GATC 3 cut(s) 11, 148, 165
DpnII GATC 3 cut(s) 9, 146, 163
Eco105I TACGTA 1 cut(s) 198
FblI GTMKAC 1 cut(s) 23
Fnu4HI GCNGC 1 cut(s) 124
Fsp4HI GCNGC 1 cut(s) 124
GluI GCNGC 1 cut(s) 124
HaeIII GGCC 1 cut(s) 5
HgaI GACGC 1 cut(s) 85
Hin1I GRCGYC 1 cut(s) 77
HphI GGTGA 1 cut(s) 85
Hpy166II GTNNAC 1 cut(s) 24
Hpy188I TCNGA 1 cut(s) 163
Hpy188III TCNNGA 2 cut(s) 68, 106
Hpy8I GTNNAC 1 cut(s) 24
HpyAV CCTTC 1 cut(s) 160
HpyCH4III ACNGT 1 cut(s) 39
HpyCH4IV ACGT 1 cut(s) 197
HpySE526I ACGT 1 cut(s) 197
Hsp92I GRCGYC 1 cut(s) 77
Kzo9I GATC 3 cut(s) 9, 146, 163
LpnPI CCDG 1 cut(s) 81
Lsp1109I GCAGC 1 cut(s) 135
MaeII ACGT 1 cut(s) 197
MaeIII GTNAC 1 cut(s) 73
MalI GATC 3 cut(s) 11, 148, 165
MboI GATC 3 cut(s) 9, 146, 163
MboII GAAGA 1 cut(s) 163
MflI RGATCY 1 cut(s) 146
MluCI AATT 1 cut(s) 61
MnlI CCTC 3 cut(s) 51, 64, 102
MseI TTAA 2 cut(s) 93, 179
NdeII GATC 3 cut(s) 9, 146, 163
NmeAIII GCCGAG 1 cut(s) 81
NmuCI GTSAC 1 cut(s) 73
PcsI WCGNNNNNNNCGW 1 cut(s) 53
PkrI GCNGC 1 cut(s) 125
Ppu21I YACGTR 1 cut(s) 198
PsuI RGATCY 1 cut(s) 146
SaqAI TTAA 2 cut(s) 93, 179
SatI GCNGC 1 cut(s) 124
Sau3AI GATC 3 cut(s) 9, 146, 163
SetI ASST 3 cut(s) 75, 113, 200
SgeI CNNG 8 cut(s) 19, 48, 55, 69, 80, 109, 118, 166
SmlI CTYRAG 1 cut(s) 106
SmoI CTYRAG 1 cut(s) 106
SnaBI TACGTA 1 cut(s) 198
Sse9I AATT 1 cut(s) 61
TaaI ACNGT 1 cut(s) 39
TaiI ACGT 1 cut(s) 200
TasI AATT 1 cut(s) 61
Tru1I TTAA 2 cut(s) 93, 179
Tru9I TTAA 2 cut(s) 93, 179
TseFI GTSAC 1 cut(s) 73
TseI GCWGC 1 cut(s) 123
Tsp45I GTSAC 1 cut(s) 73
TspDTI ATGAA 2 cut(s) 65, 91
XapI RAATTY 1 cut(s) 61
XmiI GTMKAC 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.