RchiOBHm_Chr6g0273501

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0014380
Physical Location & Seq
Reverse (-)
34369537 .. 34372478
2942 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1731 bp
ATGGCCAAATTGGAGTTGTTGTTACAGAAATGCGACTCTCTCACCCACATCAAACAGCTCCAAGCCCACCTCTTAACCATTGGTCGATTCCAACTCTACCCCTCCATCACCATCAAGCTCCTCGAGCTCTGTGCTCTTCCCCCCATCACCAATCTCCCTTACGCCACAACCCTCTTCCACCAACTCCAAAGCCCTTCCACCAGGCACTGGAACGCCGTCGTTCGAGGCCTCGCCCAGAGCCTCCAACCCACCCAAGCCGTCACATGGTACGCCACCATGTCGCGCTCTTCCCAAAAGGTCGACGCGCTCACTTGCTCCTTCGCTCTCAAAGCGTGTGCACGCGCCTTGGCGCTGTCCGAGGCCATGCAGATTCACTCTCAGCTTCTGCGTTTCGGGTTTGGACGTGATGTGTTGTTGCGAACTACTTTGCTTGACGTGTACGCGAAAGTTGGGAAGCTGGGTTTTGCGCAGAAGGTGTTCGACGAAATGCCTGAGAGGGATATAGCTTGTTGGAATGCTTTGGTTGCTGGGTTGGCTCAGGGGAGTCAACCCAGTGAGGCTTTAGCTTTGTTTGAGAGAATGGCTGAGGAGGAGGGGTTAAAGCCCAATGAAGTCACTGTCCTCGGCGCGCTCTCGGCGTGCTCTCAATTGGGTGCATTGAGAGGTGGAGAGAGAATACATACCTATATAGTGAATGCCAAGCTTGATACGCATGTCATTGTTTGCAATGCGGTTATTGATATGTATGCGAAATGCGGGTTCGTGGATAGAGCATATGAGGCGTTTGAGAATATGAGATGTGGGAAGAATTTGATAACTTGGAATACGATGATAATGGCATTTGCTATGCATGGTGATGGTTGCAAAGCGCTTGAGCTTTTTGAGAAGATGGGTAAAAATGGAGTGTGCCCTGATGCAGTGTCGTATCTTGCTGCGTTGTGTGCGTGCAATCATGCAGGACTGGTGGAAGATGGGGTTAAGTTATTTAATTCAATGGCGGGGAGTGGGATGGTACCGAATGTTAAGCATTATGGGACTGTGGTTGATTTGTTGGGACGAGCTGGGCGACTTCAAGAGGCTTATGAGATTGTGAAATCTATGCCGATGTTTCCTGATGTAGTACTGTGGCAGACTTTGCTTGGTGCCAGCAAGACCTATGGGAATGTGGAAATGGCAGAGATGGCGTCACGGAACTTGGTTGAGTTGGGGTCTGAGGGTTGTGGTGATTTCGTGTTGTTATCAAATGTTTATGCGGCTCATAATAGATGGGATGATGTAGGCAGGGTGCGGGAAGCCATGAAGAGAAGGGATGTGAAGAAGATACCTGGTTTCGGTTACATAGAAGTTGAAGGTGTGATACACAAATTTGTGAATGGTGATCAAAACCATGTTAATAGTCATGAGATTTATTCAAAGCTAGATGAGATCAAATGCAGGATTAAAGCCTATGGATATGTTGCAAAGACAAATCATGTGTTGCATGATATTGGGGAGGAGGACAAAGAAAATGCATTGAGCTACCATTGTGAGAAGTTGGCTGTGGCTTTTGGTTTGATCAGCACTGATGAGGGGACACCAATTCAGGTGATTAAGAACCTAAGAATATGTGATGATTGTCATGTCGTGATGAAACTTATTTCAGAAATATATAATAGGGAAATTATTGTAAGGGATCGAGCCCGGTTTCACAGATTTCAAGATGGACTTTGTTCTTGCAGAGATTATTGGTGA

Protein Analysis

576

Amino Acids

64.13

Weight (kDa)

7.01

Isoelectric Point (pI)

39.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 270 - 316 6.9e-10 PPR repeat family
PPR PF01535 272 - 302 2.6e-06 PPR repeat
E_motif PF20431 386 - 448 7.7e-19 E motif
DYW_deaminase PF14432 484 - 576 8.2e-39 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014380)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34160 AT1G34160
fragaria_vesca FvH4_2g12730
malus_domestica MD05G1037500.v1.1 MD10G1041300.v1.1
prunus_persica Prupe.8G045500_v2.0.a1 Prupe.8G045500_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0273501
rosa_laevigata RLG00000013612
rosa_multiflora Rmu_co8087438.1_g000001 Rmu_sc0026438.1_g000001
rosa_roxburghii Rroxscaffold_7G00195290
rosa_rugosa Rorug06G0075900
rosa_samantha Rh6AG190600 Rh6BG194100 Rh6DG185200
rosa_wichuraiana Rw6G016680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 468
Acc65I GGTACC 1 cut(s) 1012
AccB1I GGYRCC 2 cut(s) 1012, 1142
AccB7I CCANNNNNTGG 1 cut(s) 207
AccI GTMKAC 1 cut(s) 300
AccII CGCG 5 cut(s) 283, 305, 342, 443, 629
AciI CCGC 5 cut(s) 731, 756, 998, 1253, 1288
AclWI GGATC 1 cut(s) 1680
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 808, 1364
AcyI GRCGYC 1 cut(s) 1184
AfaI GTAC 4 cut(s) 269, 440, 1014, 1122
AfeI AGCGCT 1 cut(s) 870
AfiI CCNNNNNNNGG 3 cut(s) 207, 264, 1331
AflIII ACRYGT 1 cut(s) 435
AgsI TTSAA 5 cut(s) 993, 1073, 1349, 1413, 1697
AjiI CACGTC 2 cut(s) 404, 436
AjnI CCWGG 2 cut(s) 200, 1324
Alw21I GWGCWC 4 cut(s) 129, 136, 340, 644
Alw44I GTGCAC 1 cut(s) 336
AlwI GGATC 1 cut(s) 1680
AlwNI CAGNNNCTG 2 cut(s) 207, 385
Ama87I CYCGRG 1 cut(s) 122
Aor51HI AGCGCT 1 cut(s) 870
AoxI GGCC 3 cut(s) 3, 226, 360
ApaLI GTGCAC 1 cut(s) 336
ApeKI GCWGC 1 cut(s) 932
ApoI RAATTY 2 cut(s) 808, 1364
Asp700I GAANNNNTTC 1 cut(s) 476
Asp718I GGTACC 1 cut(s) 1012
AspLEI GCGC 8 cut(s) 285, 307, 344, 352, 469, 629, 631, 871
AsuC2I CCSGG 1 cut(s) 1681
AsuHPI GGTGA 7 cut(s) 34, 100, 139, 866, 1235, 1388, 1597
AvaI CYCGRG 1 cut(s) 122
BaeGI GKGCMC 2 cut(s) 340, 911
BaeI ACNNNNGTAYC 2 cut(s) 699, 732
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 1012, 1142
BanII GRGCYC 2 cut(s) 129, 1681
BarI GAAGNNNNNNTAC 2 cut(s) 1341, 1373
Bbv12I GWGCWC 4 cut(s) 129, 136, 340, 644
BbvCI CCTCAGC 1 cut(s) 585
BbvI GCAGC 1 cut(s) 919
BceAI ACGGC 2 cut(s) 200, 242
BcgI CGANNNNNNTGC 2 cut(s) 113, 147
BciT130I CCWGG 2 cut(s) 202, 1326
BclI TGATCA 2 cut(s) 1378, 1554
BcnI CCSGG 1 cut(s) 1681
BfaI CTAG 1 cut(s) 1418
BfoI RGCGCY 2 cut(s) 353, 872
BisI GCNGC 2 cut(s) 933, 1254
BlsI GCNGC 2 cut(s) 934, 1255
BmcAI AGTACT 1 cut(s) 1122
Bme1390I CCNGG 3 cut(s) 202, 1326, 1681
BmeT110I CYCGRG 1 cut(s) 122
BmgBI CACGTC 2 cut(s) 404, 436
BmiI GGNNCC 2 cut(s) 1014, 1144
BmrFI CCNGG 3 cut(s) 202, 1326, 1681
BmrI ACTGGG 1 cut(s) 546
BmsI GCATC 1 cut(s) 904
BmuI ACTGGG 1 cut(s) 546
Bpu10I CCTNAGC 2 cut(s) 537, 585
BpuEI CTTGAG 1 cut(s) 893
BpuMI CCSGG 1 cut(s) 1681
BsaHI GRCGYC 1 cut(s) 1184
BsaJI CCNNGG 3 cut(s) 345, 357, 622
BsaXI ACNNNNNCTCC 4 cut(s) 5, 35, 581, 611
Bsc4I CCNNNNNNNGG 3 cut(s) 207, 264, 1331
Bse1I ACTGG 3 cut(s) 212, 552, 966
Bse3DI GCAATG 1 cut(s) 733
BseBI CCWGG 2 cut(s) 202, 1326
BseDI CCNNGG 3 cut(s) 345, 357, 622
BseGI GGATG 3 cut(s) 1014, 1276, 1315
BseLI CCNNNNNNNGG 3 cut(s) 207, 264, 1331
BseMI GCAATG 1 cut(s) 733
BseMII CTCAG 5 cut(s) 392, 483, 551, 576, 1203
BseNI ACTGG 3 cut(s) 212, 552, 966
BsePI GCGCGC 1 cut(s) 627
BseRI GAGGAG 4 cut(s) 110, 602, 605, 1508
BseSI GKGCMC 2 cut(s) 340, 911
BseXI GCAGC 1 cut(s) 919
BseYI CCCAGC 3 cut(s) 457, 527, 1061
Bsh1236I CGCG 5 cut(s) 283, 305, 342, 443, 629
BshFI GGCC 3 cut(s) 5, 228, 362
BshNI GGYRCC 2 cut(s) 1012, 1142
BsiHKAI GWGCWC 4 cut(s) 129, 136, 340, 644
BsiHKCI CYCGRG 1 cut(s) 122
BsiSI CCGG 1 cut(s) 1681
BslFI GGGAC 3 cut(s) 1048, 1068, 1585
BslI CCNNNNNNNGG 3 cut(s) 207, 264, 1331
BsmFI GGGAC 3 cut(s) 1048, 1068, 1585
BsmI GAATGC 2 cut(s) 520, 700
BsnI GGCC 3 cut(s) 5, 228, 362
BsoBI CYCGRG 1 cut(s) 122
Bsp1286I GDGCHC 6 cut(s) 129, 136, 340, 644, 911, 1681
Bsp143I GATC 4 cut(s) 1378, 1425, 1554, 1672
BspACI CCGC 5 cut(s) 731, 756, 998, 1253, 1288
BspANI GGCC 3 cut(s) 5, 228, 362
BspCNI CTCAG 5 cut(s) 391, 484, 550, 577, 1204
BspFNI CGCG 5 cut(s) 283, 305, 342, 443, 629
BspHI TCATGA 1 cut(s) 1399
BspLI GGNNCC 2 cut(s) 1014, 1144
BspPI GGATC 1 cut(s) 1680
BspQI GCTCTTC 2 cut(s) 141, 292
BspT107I GGYRCC 2 cut(s) 1012, 1142
BsrDI GCAATG 1 cut(s) 733
BsrI ACTGG 3 cut(s) 212, 552, 966
BssECI CCNNGG 3 cut(s) 345, 357, 622
BssHII GCGCGC 1 cut(s) 627
BssMI GATC 4 cut(s) 1378, 1425, 1554, 1672
BssNI GRCGYC 1 cut(s) 1184
BssT1I CCWWGG 1 cut(s) 345
Bst2UI CCWGG 2 cut(s) 202, 1326
Bst4CI ACNGT 3 cut(s) 619, 1039, 1125
Bst6I CTCTTC 4 cut(s) 141, 179, 292, 1295
BstACI GRCGYC 1 cut(s) 1184
BstAPI GCANNNNNTGC 1 cut(s) 1135
BstC8I GCNNGC 5 cut(s) 340, 629, 640, 946, 1147
BstDEI CTNAG 6 cut(s) 378, 492, 537, 585, 1212, 1598
BstF5I GGATG 3 cut(s) 1014, 1276, 1315
BstFNI CGCG 5 cut(s) 283, 305, 342, 443, 629
BstH2I RGCGCY 2 cut(s) 353, 872
BstHHI GCGC 8 cut(s) 285, 307, 344, 352, 469, 629, 631, 871
BstKTI GATC 4 cut(s) 1381, 1428, 1557, 1675
BstMBI GATC 4 cut(s) 1378, 1425, 1554, 1672
BstNI CCWGG 2 cut(s) 202, 1326
BstNSI RCATGY 1 cut(s) 716
BstSCI CCNGG 3 cut(s) 200, 1324, 1679
BstSLI GKGCMC 2 cut(s) 340, 911
BstUI CGCG 5 cut(s) 283, 305, 342, 443, 629
BstV1I GCAGC 1 cut(s) 919
BsuRI GGCC 3 cut(s) 5, 228, 362
BtrI CACGTC 2 cut(s) 404, 436
BtsCI GGATG 3 cut(s) 1014, 1276, 1315
BtsI GCAGTG 1 cut(s) 924
BtsIMutI CAGTG 5 cut(s) 205, 559, 615, 924, 1560
Cac8I GCNNGC 5 cut(s) 340, 629, 640, 946, 1147
CaiI CAGNNNCTG 2 cut(s) 207, 385
CciI TCATGA 1 cut(s) 1399
CfoI GCGC 8 cut(s) 285, 307, 344, 352, 469, 629, 631, 871
CseI GACGC 2 cut(s) 311, 1173
CsiI ACCWGGT 1 cut(s) 1324
Csp6I GTAC 4 cut(s) 268, 439, 1013, 1121
CviQI GTAC 4 cut(s) 268, 439, 1013, 1121
DdeI CTNAG 6 cut(s) 378, 492, 537, 585, 1212, 1598
DpnI GATC 4 cut(s) 1380, 1427, 1556, 1674
DpnII GATC 4 cut(s) 1378, 1425, 1554, 1672
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 4 cut(s) 141, 179, 292, 1295
EarI CTCTTC 4 cut(s) 141, 179, 292, 1295
Ecl136II GAGCTC 1 cut(s) 127
Eco130I CCWWGG 1 cut(s) 345
Eco147I AGGCCT 1 cut(s) 228
Eco24I GRGCYC 2 cut(s) 129, 1681
Eco47III AGCGCT 1 cut(s) 870
Eco53kI GAGCTC 1 cut(s) 127
Eco88I CYCGRG 1 cut(s) 122
EcoICRI GAGCTC 1 cut(s) 127
EcoRII CCWGG 2 cut(s) 200, 1324
EcoT14I CCWWGG 1 cut(s) 345
EcoT22I ATGCAT 2 cut(s) 852, 1513
EcoT38I GRGCYC 2 cut(s) 129, 1681
ErhI CCWWGG 1 cut(s) 345
FalI AAGNNNNNCTT 2 cut(s) 1689, 1721
FaqI GGGAC 3 cut(s) 1048, 1068, 1585
FauI CCCGC 3 cut(s) 749, 991, 1281
FauNDI CATATG 1 cut(s) 775
FbaI TGATCA 2 cut(s) 1378, 1554
FblI GTMKAC 1 cut(s) 300
Fnu4HI GCNGC 2 cut(s) 933, 1254
FokI GGATG 3 cut(s) 1021, 1283, 1322
FriOI GRGCYC 2 cut(s) 129, 1681
Fsp4HI GCNGC 2 cut(s) 933, 1254
FspBI CTAG 1 cut(s) 1418
FspI TGCGCA 1 cut(s) 468
GlaI GCGC 8 cut(s) 284, 306, 343, 351, 468, 628, 630, 870
GluI GCNGC 2 cut(s) 933, 1254
GsaI CCCAGC 3 cut(s) 461, 531, 1065
HaeII RGCGCY 2 cut(s) 353, 872
HaeIII GGCC 3 cut(s) 5, 228, 362
HapII CCGG 1 cut(s) 1681
HgaI GACGC 2 cut(s) 311, 1173
HhaI GCGC 8 cut(s) 285, 307, 344, 352, 469, 629, 631, 871
Hin1I GRCGYC 1 cut(s) 1184
Hin6I GCGC 8 cut(s) 283, 305, 342, 350, 467, 627, 629, 869
HinP1I GCGC 8 cut(s) 283, 305, 342, 350, 467, 627, 629, 869
HincII GTYRAC 2 cut(s) 301, 548
HindII GTYRAC 2 cut(s) 301, 548
HindIII AAGCTT 1 cut(s) 701
HinfI GANTC 4 cut(s) 35, 87, 370, 544
HpaII CCGG 1 cut(s) 1681
HphI GGTGA 7 cut(s) 34, 100, 139, 866, 1235, 1388, 1597
Hpy166II GTNNAC 4 cut(s) 301, 338, 439, 548
Hpy188I TCNGA 3 cut(s) 358, 1213, 1642
Hpy188III TCNNGA 5 cut(s) 1073, 1112, 1400, 1624, 1697
Hpy8I GTNNAC 4 cut(s) 301, 338, 439, 548
Hpy99I CGWCG 3 cut(s) 221, 305, 485
HpyAV CCTTC 5 cut(s) 204, 328, 466, 1299, 1343
HpyCH4III ACNGT 3 cut(s) 619, 1039, 1125
HpyCH4IV ACGT 2 cut(s) 403, 435
HpyF3I CTNAG 6 cut(s) 378, 492, 537, 585, 1212, 1598
HpySE526I ACGT 2 cut(s) 403, 435
Hsp92I GRCGYC 1 cut(s) 1184
HspAI GCGC 8 cut(s) 283, 305, 342, 350, 467, 627, 629, 869
KpnI GGTACC 1 cut(s) 1016
Ksp22I TGATCA 2 cut(s) 1378, 1554
Kzo9I GATC 4 cut(s) 1378, 1425, 1554, 1672
LguI GCTCTTC 2 cut(s) 141, 292
LmnI GCTCC 3 cut(s) 63, 123, 320
Lsp1109I GCAGC 1 cut(s) 919
LweI GCATC 1 cut(s) 904
MabI ACCWGGT 1 cut(s) 1324
MaeI CTAG 1 cut(s) 1418
MaeII ACGT 2 cut(s) 403, 435
MaeIII GTNAC 5 cut(s) 21, 259, 613, 1185, 1334
MalI GATC 4 cut(s) 1380, 1427, 1556, 1674
MboI GATC 4 cut(s) 1378, 1425, 1554, 1672
MboII GAAGA 9 cut(s) 128, 166, 279, 817, 898, 980, 1312, 1327, 1330
MfeI CAATTG 1 cut(s) 647
MhlI GDGCHC 6 cut(s) 129, 136, 340, 644, 911, 1681
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 7 cut(s) 8, 647, 808, 988, 1364, 1578, 1659
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 29, 553
MmeI TCCRAC 3 cut(s) 115, 268, 491
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 2 cut(s) 852, 1513
MroXI GAANNNNTTC 1 cut(s) 476
MscI TGGCCA 1 cut(s) 5
MseI TTAA 8 cut(s) 74, 599, 978, 987, 1023, 1392, 1440, 1590
MslI CAYNNNNRTG 1 cut(s) 855
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 1 cut(s) 1681
MspR9I CCNGG 3 cut(s) 202, 1326, 1681
MunI CAATTG 1 cut(s) 647
Mva1269I GAATGC 2 cut(s) 520, 700
MvaI CCWGG 2 cut(s) 202, 1326
MvnI CGCG 5 cut(s) 283, 305, 342, 443, 629
NciI CCSGG 1 cut(s) 1681
NdeI CATATG 1 cut(s) 775
NdeII GATC 4 cut(s) 1378, 1425, 1554, 1672
NlaIV GGNNCC 2 cut(s) 1014, 1144
NmeAIII GCCGAG 2 cut(s) 603, 614
NmuCI GTSAC 3 cut(s) 259, 613, 1185
NsbI TGCGCA 1 cut(s) 468
NsiI ATGCAT 2 cut(s) 852, 1513
NspI RCATGY 1 cut(s) 716
PaeR7I CTCGAG 1 cut(s) 122
PagI TCATGA 1 cut(s) 1399
PauI GCGCGC 1 cut(s) 627
PceI AGGCCT 1 cut(s) 228
PciSI GCTCTTC 2 cut(s) 141, 292
PcsI WCGNNNNNNNCGW 1 cut(s) 1063
PctI GAATGC 2 cut(s) 520, 700
PdmI GAANNNNTTC 1 cut(s) 476
PfeI GAWTC 2 cut(s) 87, 370
PflMI CCANNNNNTGG 1 cut(s) 207
PkrI GCNGC 2 cut(s) 934, 1255
PleI GAGTC 2 cut(s) 29, 552
PpsI GAGTC 2 cut(s) 29, 552
Psp124BI GAGCTC 1 cut(s) 129
Psp6I CCWGG 2 cut(s) 200, 1324
PspFI CCCAGC 3 cut(s) 457, 527, 1061
PspGI CCWGG 2 cut(s) 200, 1324
PspN4I GGNNCC 2 cut(s) 1014, 1144
PspXI VCTCGAGB 1 cut(s) 122
PstNI CAGNNNCTG 2 cut(s) 207, 385
PteI GCGCGC 1 cut(s) 627
RsaI GTAC 4 cut(s) 269, 440, 1014, 1122
RsaNI GTAC 4 cut(s) 268, 439, 1013, 1121
RseI CAYNNNNRTG 1 cut(s) 855
SacI GAGCTC 1 cut(s) 129
SalI GTCGAC 1 cut(s) 299
SapI GCTCTTC 2 cut(s) 141, 292
SaqAI TTAA 8 cut(s) 74, 599, 978, 987, 1023, 1392, 1440, 1590
SatI GCNGC 2 cut(s) 933, 1254
Sau3AI GATC 4 cut(s) 1378, 1425, 1554, 1672
ScaI AGTACT 1 cut(s) 1122
SchI GAGTC 2 cut(s) 29, 553
ScrFI CCNGG 3 cut(s) 202, 1326, 1681
SduI GDGCHC 6 cut(s) 129, 136, 340, 644, 911, 1681
SexAI ACCWGGT 1 cut(s) 1324
SfaNI GCATC 1 cut(s) 904
Sfr274I CTCGAG 1 cut(s) 122
SlaI CTCGAG 1 cut(s) 122
SmiMI CAYNNNNRTG 1 cut(s) 855
SmlI CTYRAG 2 cut(s) 122, 872
SmoI CTYRAG 2 cut(s) 122, 872
Sse9I AATT 7 cut(s) 8, 647, 808, 988, 1364, 1578, 1659
SseBI AGGCCT 1 cut(s) 228
SsiI CCGC 5 cut(s) 731, 756, 998, 1253, 1288
SspMI CTAG 1 cut(s) 1418
SstI GAGCTC 1 cut(s) 129
StuI AGGCCT 1 cut(s) 228
StyD4I CCNGG 3 cut(s) 200, 1324, 1679
StyI CCWWGG 1 cut(s) 345
TaaI ACNGT 3 cut(s) 619, 1039, 1125
TaiI ACGT 2 cut(s) 406, 438
TaqI TCGA 6 cut(s) 85, 123, 223, 300, 480, 1675
TasI AATT 7 cut(s) 8, 647, 808, 988, 1364, 1578, 1659
TatI WGTACW 1 cut(s) 1120
TauI GCSGC 1 cut(s) 1256
TfiI GAWTC 2 cut(s) 87, 370
Tru1I TTAA 8 cut(s) 74, 599, 978, 987, 1023, 1392, 1440, 1590
Tru9I TTAA 8 cut(s) 74, 599, 978, 987, 1023, 1392, 1440, 1590
TscAI CASTG 5 cut(s) 212, 559, 622, 924, 1567
TseFI GTSAC 3 cut(s) 259, 613, 1185
TseI GCWGC 1 cut(s) 932
Tsp45I GTSAC 3 cut(s) 259, 613, 1185
TspDTI ATGAA 3 cut(s) 624, 1313, 1643
TspGWI ACGGA 1 cut(s) 1204
TspRI CASTG 5 cut(s) 212, 559, 622, 924, 1567
Van91I CCANNNNNTGG 1 cut(s) 207
VneI GTGCAC 1 cut(s) 336
XapI RAATTY 2 cut(s) 808, 1364
XceI RCATGY 1 cut(s) 716
XhoI CTCGAG 1 cut(s) 122
XmiI GTMKAC 1 cut(s) 300
XmnI GAANNNNTTC 1 cut(s) 476
XspI CTAG 1 cut(s) 1418
ZrmI AGTACT 1 cut(s) 1122
Zsp2I ATGCAT 2 cut(s) 852, 1513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.