Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007651

Physical Location & Seq

Genomic Coordinates Reverse (-)

41804464 .. 41814605

Gene Structure 10142 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGATTTCGATGAGTATGACTATTTAGAGAAAACAGTTGAAAATCCTGAACCTCTGACATCAAAGGACAATGCAAATGGTGGGGAGGAAACTTTGAAGTCTGGAGAAAAAGGCCGCAGCCGAAGTTCAAAGCATAAGAGTGATGATAAAGATCATGACGGGGAGCGTCGCTCAAAGCGTTCAAAATCTGGAGATGAGTCGCATGACCATGATCGGCAAAGAGAGAGGGGATCTTCTCGCCACCGTTCACAGTCCAGAGATAGAGAAAGGGACCGTCACAGGAGTAGTCGGGAACACAGAGATAGGGAGGATAGAGAAAAGGAGGAAAGAAATGGCAAGGAGAGAGATAGGAACAGGGACAGAGAACAGGATCGTGATCGAGACAGGGATAGGAGAGAGCGTGACCGCGATACTGACCGCGACAGGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGATCGGTCACGTCGAAGCAGGAGTCATTCAGAAAGGCATAGAAGTGATCGGGATGAAAGAGAGAAAAGCCGTGACATAGAGCATACAGGAAGGGAGAAGGAGAAAGATCTACGGGAGCGGGAGAAAGAAAGCAGAAGATATAAAGAAAAAAAGGAAGAAGTGACAGAACCAGAGGCTGATCCTGAAAGAGATCAGAGGACAGTATTTGCTTATCAGATTTGTCTGAAGGCAGACGAAAGAGATGTATATGATTTCTTCTCACGAGCCGGCAAGGTCCGCGATGTACGTCTCATTATGGATCGTAACTCAAGACGGTCCAAGGGAGTTGGGTATATCGAGTTCTATGATGCGATGTCAGTACCTATGGCTATTGCACTCTCTGGTCAACCACTTCGAGGTCAACCAGTGATGGTGAAGCCATCAGAGGCTGAGAAGAATCTGGTTCAGTCAACTTCTGTGGTTACTGGAGCTGGTGGGATGATAGGTCCATATTCTGGTGGAGCTAGACGGCTGTATGTTGGCAATCTACACACCAACATAAAAGAAGATGATCTACGCCAGGTTTTTGGAGCATTTGGTGCTGTAGAACTGGTTCAGTTGCCTCTTGACGAAACTAACAACTGCAAAGGTTTTGGATTTGTTCAGTTTCAACGGCTTGAAGATGCTAGAAATGCACTGAGTTTGAATGGCCAATTGGAGATTGCTGGTCGAGTAATTAAGGTATCAGCTGTGACTGACCAGGCTGGAATGCAAGATGTTGGAGCAAATGCTGGTGATTTTGATGACGATGAAGGTGGTGGCTTGTCATTGAATGCCCGGTCACGAGCAATTCTTATGCAGAAACTGGATCGTAGTGGCAGTGGATCAAGTCTTGCTGTCAATAGCACTGGTCTACCAGTGGCACTTCCAGCGGCACCAATCCTGGGAGCTGCACCAGGAGTTTCTTCTCTTGGTACTCCCATGGCCTCTGTTCCTGGTCTTGCTGGACTTGGTGTTCCGGGTCTTCAAATTCCTACAGCTACTGTTCCTTCTGTAGATACAATTGGTGTTCCAAGCGAATGTTTACTGTTGACAAATATGTTTGATCCTAAAGAAATTGAGGCTGAACCAGATATTGATGTGGACATTAAAGAAGATGTTCAGGAGGAATGTTCAAAATACGGGAAGCTGAAACATATTTTTGTTGATAAGAATACCGCTGGTTTTGTGTACTTGAGATTTGAGAACACACAAGCTGCAATAAATGCTCGACAAGTTCTCCATGGAAGATGGTTTGCTGGGAAGATGATCACAGCGACTTTCATGTTGCCTCAGACCTATGAGACTAAATTCCCTGAGAGCCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0016604 GO:0016607 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RBM39linker RRM_1

Protein Analysis

602

Amino Acids

68.23

Weight (kDa)

6.32

Isoelectric Point (pI)

52.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	231 - 290	1.7e-09	RNA recognition motif
RRM_1	PF00076	325 - 394	2.1e-19	RNA recognition motif
RBM39linker	PF15519	414 - 519	2e-15	linker between RRM2 and RRM3 domains in RBM39 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007651)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16940 AT2G16940 AT2G16940 AT2G16940 AT2G16940
fragaria_vesca	FvH4_2g15540
malus_domestica	MD05G1123800.v1.1 MD10G1126500.v1.1
prunus_persica	Prupe.8G167600_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1 Prupe.8G167800_v2.0.a1
pyrus_communis	pycom05g11800
rosa_chinensis	RchiOBHm_Chr6g0278711
rosa_laevigata	RLG00000013199
rosa_multiflora	Rmu_sc0000531.1_g000006
rosa_roxburghii	Rroxscaffold_7G00189690 Rroxscaffold_7G00189950
rosa_rugosa	Rorug06G0118400
rosa_samantha	Rh6AG227200 Rh6BG232600 Rh6CG234800 Rh6DG226400
rosa_wichuraiana	Rw6G019930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1375
AccB7I	CCANNNNNTGG	1 cut(s)	956
AccBSI	CCGCTC	1 cut(s)	580
AccI	GTMKAC	1 cut(s)	1354
AccII	CGCG	3 cut(s)	408, 420, 741
AciI	CCGC	7 cut(s)	115, 406, 418, 580, 739, 1373, 1659
AclWI	GGATC	8 cut(s)	238, 378, 471, 635, 768, 1317, 1333, 1541
AcoI	YGGCCR	1 cut(s)	1150
AcsI	RAATTY	2 cut(s)	1470, 1790
AcuI	CTGAAG	1 cut(s)	707
AfaI	GTAC	4 cut(s)	747, 822, 1417, 1673
AfiI	CCNNNNNNNGG	4 cut(s)	424, 857, 956, 1385
AjiI	CACGTC	1 cut(s)	473
AjnI	CCWGG	5 cut(s)	1020, 1200, 1383, 1396, 1435
AjuI	GAANNNNNNNTTGG	2 cut(s)	1139, 1171
AloI	GAACNNNNNNTCC	2 cut(s)	1440, 1472
AluBI	AGCT	7 cut(s)	932, 965, 1190, 1391, 1481, 1630, 1697
AluI	AGCT	7 cut(s)	932, 965, 1190, 1391, 1481, 1630, 1697
Alw26I	GTCTC	3 cut(s)	375, 755, 1778
AlwI	GGATC	8 cut(s)	238, 378, 471, 635, 768, 1317, 1333, 1541
AlwNI	CAGNNNCTG	4 cut(s)	638, 890, 1306, 1484
AoxI	GGCC	3 cut(s)	112, 1150, 1425
ApeKI	GCWGC	3 cut(s)	117, 1391, 1697
ApoI	RAATTY	2 cut(s)	1470, 1790
ArsI	GACNNNNNNTTYG	2 cut(s)	469, 501
Asp700I	GAANNNNTTC	2 cut(s)	1053, 1599
AspS9I	GGNCC	4 cut(s)	271, 736, 777, 947
AsuC2I	CCSGG	2 cut(s)	1279, 1461
AsuHPI	GGTGA	2 cut(s)	886, 1247
AvaII	GGWCC	4 cut(s)	271, 736, 777, 947
BalI	TGGCCA	1 cut(s)	1152
BanI	GGYRCC	1 cut(s)	1375
BarI	GAAGNNNNNNTAC	2 cut(s)	999, 1031
BauI	CACGAG	2 cut(s)	723, 1284
BbsI	GAAGAC	1 cut(s)	1457
BbvI	GCAGC	3 cut(s)	129, 1378, 1684
BccI	CCATC	3 cut(s)	865, 889, 1725
BceAI	ACGGC	3 cut(s)	516, 986, 1130
BciT130I	CCWGG	5 cut(s)	1022, 1202, 1385, 1398, 1437
BclI	TGATCA	1 cut(s)	1749
BcnI	CCSGG	2 cut(s)	1279, 1461
BcoDI	GTCTC	3 cut(s)	375, 755, 1778
BfaI	CTAG	2 cut(s)	966, 1128
BfmI	CTRYAG	3 cut(s)	1044, 1476, 1494
BglII	AGATCT	1 cut(s)	568
BisI	GCNGC	5 cut(s)	115, 118, 1374, 1392, 1698
BlsI	GCNGC	5 cut(s)	116, 119, 1375, 1393, 1699
Bme1390I	CCNGG	7 cut(s)	1022, 1202, 1279, 1385, 1398, 1437, 1461
Bme18I	GGWCC	4 cut(s)	271, 736, 777, 947
BmgBI	CACGTC	1 cut(s)	473
BmgT120I	GGNCC	4 cut(s)	271, 736, 777, 947
BmiI	GGNNCC	2 cut(s)	272, 1377
BmrFI	CCNGG	7 cut(s)	1022, 1202, 1279, 1385, 1398, 1437, 1461
BmsI	GCATC	2 cut(s)	799, 1114
BpiI	GAAGAC	1 cut(s)	1457
BplI	GAGNNNNNCTC	2 cut(s)	155, 187
BpmI	CTGGAG	3 cut(s)	123, 210, 948
BpuEI	CTTGAG	2 cut(s)	754, 1696
BpuMI	CCSGG	2 cut(s)	1279, 1461
BsaBI	GATNNNNATC	2 cut(s)	150, 375
BsaJI	CCNNGG	4 cut(s)	780, 1384, 1422, 1723
BsaXI	ACNNNNNCTCC	4 cut(s)	385, 415, 1704, 1734
Bsc4I	CCNNNNNNNGG	4 cut(s)	424, 857, 956, 1385
Bse118I	RCCGGY	2 cut(s)	728, 1803
Bse1I	ACTGG	6 cut(s)	866, 931, 1056, 1311, 1354, 1358
Bse8I	GATNNNNATC	2 cut(s)	150, 375
BseBI	CCWGG	5 cut(s)	1022, 1202, 1385, 1398, 1437
BseDI	CCNNGG	4 cut(s)	780, 1384, 1422, 1723
BseGI	GGATG	2 cut(s)	520, 945
BseJI	GATNNNNATC	2 cut(s)	150, 375
BseLI	CCNNNNNNNGG	4 cut(s)	424, 857, 956, 1385
BseMII	CTCAG	4 cut(s)	882, 1130, 1787, 1788
BseNI	ACTGG	6 cut(s)	866, 931, 1056, 1311, 1354, 1358
BseXI	GCAGC	3 cut(s)	129, 1378, 1684
BseYI	CCCAGC	1 cut(s)	1739
BsgI	GTGCAG	1 cut(s)	1377
Bsh1236I	CGCG	3 cut(s)	408, 420, 741
BshFI	GGCC	3 cut(s)	114, 1152, 1427
BshNI	GGYRCC	1 cut(s)	1375
BsiSI	CCGG	4 cut(s)	729, 1279, 1460, 1804
BslFI	GGGAC	2 cut(s)	284, 371
BslI	CCNNNNNNNGG	4 cut(s)	424, 857, 956, 1385
BsmAI	GTCTC	3 cut(s)	375, 755, 1778
BsmBI	CGTCTC	1 cut(s)	755
BsmFI	GGGAC	2 cut(s)	284, 371
BsmI	GAATGC	2 cut(s)	1215, 1279
BsnI	GGCC	3 cut(s)	114, 1152, 1427
Bsp19I	CCATGG	2 cut(s)	1422, 1723
BspACI	CCGC	7 cut(s)	115, 406, 418, 580, 739, 1373, 1659
BspANI	GGCC	3 cut(s)	114, 1152, 1427
BspCNI	CTCAG	4 cut(s)	883, 1131, 1786, 1789
BspFNI	CGCG	3 cut(s)	408, 420, 741
BspHI	TCATGA	1 cut(s)	154
BspLI	GGNNCC	2 cut(s)	272, 1377
BspPI	GGATC	8 cut(s)	238, 378, 471, 635, 768, 1317, 1333, 1541
BspT107I	GGYRCC	1 cut(s)	1375
BsrBI	CCGCTC	1 cut(s)	580
BsrFI	RCCGGY	2 cut(s)	728, 1803
BsrI	ACTGG	6 cut(s)	866, 931, 1056, 1311, 1354, 1358
BssAI	RCCGGY	2 cut(s)	728, 1803
BssECI	CCNNGG	4 cut(s)	780, 1384, 1422, 1723
BssSI	CACGAG	2 cut(s)	723, 1284
BssT1I	CCWWGG	3 cut(s)	780, 1422, 1723
Bst2BI	CACGAG	2 cut(s)	723, 1284
Bst2UI	CCWGG	5 cut(s)	1022, 1202, 1385, 1398, 1437
Bst4CI	ACNGT	8 cut(s)	37, 245, 252, 275, 664, 777, 1486, 1530
BstAPI	GCANNNNNTGC	2 cut(s)	1040, 1706
BstC8I	GCNNGC	1 cut(s)	730
BstDEI	CTNAG	4 cut(s)	891, 1139, 1773, 1797
BstDSI	CCRYGG	2 cut(s)	1422, 1723
BstF5I	GGATG	2 cut(s)	520, 945
BstFNI	CGCG	3 cut(s)	408, 420, 741
BstMAI	GTCTC	3 cut(s)	375, 755, 1778
BstMWI	GCNNNNNNNGC	5 cut(s)	738, 1040, 1133, 1370, 1706
BstNI	CCWGG	5 cut(s)	1022, 1202, 1385, 1398, 1437
BstSCI	CCNGG	7 cut(s)	1020, 1200, 1277, 1383, 1396, 1435, 1459
BstSFI	CTRYAG	3 cut(s)	1044, 1476, 1494
BstUI	CGCG	3 cut(s)	408, 420, 741
BstV1I	GCAGC	3 cut(s)	129, 1378, 1684
BstV2I	GAAGAC	1 cut(s)	1457
BstX2I	RGATCY	2 cut(s)	230, 568
BstXI	CCANNNNNNTGG	1 cut(s)	1028
BstYI	RGATCY	2 cut(s)	230, 568
BsuRI	GGCC	3 cut(s)	114, 1152, 1427
BtgI	CCRYGG	2 cut(s)	1422, 1723
BtgZI	GCGATG	2 cut(s)	756, 827
BtrI	CACGTC	1 cut(s)	473
BtsCI	GGATG	2 cut(s)	520, 945
BtsI	GCAGTG	1 cut(s)	1327
BtsIMutI	CAGTG	5 cut(s)	873, 1136, 1327, 1347, 1365
Cac8I	GCNNGC	1 cut(s)	730
CaiI	CAGNNNCTG	4 cut(s)	638, 890, 1306, 1484
CciI	TCATGA	1 cut(s)	154
Cfr10I	RCCGGY	2 cut(s)	728, 1803
Cfr13I	GGNCC	4 cut(s)	271, 736, 777, 947
CseI	GACGC	1 cut(s)	155
Csp6I	GTAC	4 cut(s)	746, 821, 1416, 1672
CspCI	CAANNNNNGTGG	2 cut(s)	900, 935
CviAII	CATG	6 cut(s)	155, 203, 209, 1423, 1724, 1765
CviQI	GTAC	4 cut(s)	746, 821, 1416, 1672
DdeI	CTNAG	4 cut(s)	891, 1139, 1773, 1797
EaeI	YGGCCR	1 cut(s)	1150
Eco130I	CCWWGG	3 cut(s)	780, 1422, 1723
Eco47I	GGWCC	4 cut(s)	271, 736, 777, 947
Eco57I	CTGAAG	1 cut(s)	707
EcoRII	CCWGG	5 cut(s)	1020, 1200, 1383, 1396, 1435
EcoT14I	CCWWGG	3 cut(s)	780, 1422, 1723
ErhI	CCWWGG	3 cut(s)	780, 1422, 1723
Esp3I	CGTCTC	1 cut(s)	755
FaeI	CATG	6 cut(s)	158, 206, 212, 1426, 1727, 1768
FaqI	GGGAC	2 cut(s)	284, 371
FatI	CATG	6 cut(s)	154, 202, 208, 1422, 1723, 1764
FauI	CCCGC	1 cut(s)	573
FbaI	TGATCA	1 cut(s)	1749
FblI	GTMKAC	1 cut(s)	1354
Fnu4HI	GCNGC	5 cut(s)	115, 118, 1374, 1392, 1698
FokI	GGATG	2 cut(s)	527, 952
Fsp4HI	GCNGC	5 cut(s)	115, 118, 1374, 1392, 1698
FspBI	CTAG	2 cut(s)	966, 1128
GluI	GCNGC	5 cut(s)	115, 118, 1374, 1392, 1698
GsaI	CCCAGC	1 cut(s)	1743
GsuI	CTGGAG	3 cut(s)	123, 210, 948
HaeIII	GGCC	3 cut(s)	114, 1152, 1427
HapII	CCGG	4 cut(s)	729, 1279, 1460, 1804
HgaI	GACGC	1 cut(s)	155
Hin1II	CATG	6 cut(s)	158, 206, 212, 1426, 1727, 1768
HincII	GTYRAC	4 cut(s)	848, 863, 912, 1533
HindII	GTYRAC	4 cut(s)	848, 863, 912, 1533
HinfI	GANTC	3 cut(s)	197, 484, 898
HpaII	CCGG	4 cut(s)	729, 1279, 1460, 1804
HphI	GGTGA	2 cut(s)	886, 1247
Hpy166II	GTNNAC	9 cut(s)	248, 848, 863, 912, 1355, 1526, 1533, 1585, 1672
Hpy188I	TCNGA	7 cut(s)	57, 493, 657, 678, 687, 886, 1776
Hpy8I	GTNNAC	9 cut(s)	248, 848, 863, 912, 1355, 1526, 1533, 1585, 1672
Hpy99I	CGWCG	2 cut(s)	171, 477
HpyCH4III	ACNGT	8 cut(s)	37, 245, 252, 275, 664, 777, 1486, 1530
HpyCH4IV	ACGT	2 cut(s)	472, 748
HpyCH4V	TGCA	8 cut(s)	74, 836, 1086, 1136, 1213, 1300, 1394, 1700
HpyF10VI	GCNNNNNNNGC	5 cut(s)	738, 1040, 1133, 1370, 1706
HpyF3I	CTNAG	4 cut(s)	891, 1139, 1773, 1797
HpySE526I	ACGT	2 cut(s)	472, 748
Hsp92II	CATG	6 cut(s)	158, 206, 212, 1426, 1727, 1768
KroI	GCCGGC	1 cut(s)	728
KroNI	GCCGGC	1 cut(s)	730
Ksp22I	TGATCA	1 cut(s)	1749
LmnI	GCTCC	7 cut(s)	163, 577, 929, 962, 1031, 1223, 1388
Lsp1109I	GCAGC	3 cut(s)	129, 1378, 1684
LweI	GCATC	2 cut(s)	799, 1114
MaeI	CTAG	2 cut(s)	966, 1128
MaeII	ACGT	2 cut(s)	472, 748
MaeIII	GTNAC	9 cut(s)	275, 401, 468, 533, 622, 764, 922, 1192, 1281
MbiI	CCGCTC	1 cut(s)	580
MfeI	CAATTG	2 cut(s)	1154, 1503
MflI	RGATCY	2 cut(s)	230, 568
MlsI	TGGCCA	1 cut(s)	1152
MluCI	AATT	7 cut(s)	1154, 1176, 1290, 1470, 1503, 1557, 1790
MluNI	TGGCCA	1 cut(s)	1152
MlyI	GAGTC	2 cut(s)	206, 493
MmeI	TCCRAC	1 cut(s)	1201
Mox20I	TGGCCA	1 cut(s)	1152
MroNI	GCCGGC	1 cut(s)	728
MroXI	GAANNNNTTC	2 cut(s)	1053, 1599
MscI	TGGCCA	1 cut(s)	1152
MseI	TTAA	2 cut(s)	1179, 1590
MslI	CAYNNNNRTG	3 cut(s)	138, 207, 504
Msp20I	TGGCCA	1 cut(s)	1152
MspA1I	CMGCKG	3 cut(s)	1190, 1373, 1661
MspI	CCGG	4 cut(s)	729, 1279, 1460, 1804
MspR9I	CCNGG	7 cut(s)	1022, 1202, 1279, 1385, 1398, 1437, 1461
MunI	CAATTG	2 cut(s)	1154, 1503
Mva1269I	GAATGC	2 cut(s)	1215, 1279
MvaI	CCWGG	5 cut(s)	1022, 1202, 1385, 1398, 1437
MvnI	CGCG	3 cut(s)	408, 420, 741
MwoI	GCNNNNNNNGC	5 cut(s)	738, 1040, 1133, 1370, 1706
NaeI	GCCGGC	1 cut(s)	730
NciI	CCSGG	2 cut(s)	1279, 1461
NcoI	CCATGG	2 cut(s)	1422, 1723
NgoMIV	GCCGGC	1 cut(s)	728
NlaIII	CATG	6 cut(s)	158, 206, 212, 1426, 1727, 1768
NlaIV	GGNNCC	2 cut(s)	272, 1377
NmuCI	GTSAC	7 cut(s)	275, 401, 468, 533, 622, 1192, 1281
PagI	TCATGA	1 cut(s)	154
PcsI	WCGNNNNNNNCGW	2 cut(s)	175, 472
PctI	GAATGC	2 cut(s)	1215, 1279
PdiI	GCCGGC	1 cut(s)	730
PdmI	GAANNNNTTC	2 cut(s)	1053, 1599
PfeI	GAWTC	1 cut(s)	898
PflMI	CCANNNNNTGG	1 cut(s)	956
PkrI	GCNGC	5 cut(s)	116, 119, 1375, 1393, 1699
PleI	GAGTC	2 cut(s)	205, 492
PpsI	GAGTC	2 cut(s)	205, 492
Psp6I	CCWGG	5 cut(s)	1020, 1200, 1383, 1396, 1435
PspFI	CCCAGC	1 cut(s)	1739
PspGI	CCWGG	5 cut(s)	1020, 1200, 1383, 1396, 1435
PspN4I	GGNNCC	2 cut(s)	272, 1377
PspPI	GGNCC	4 cut(s)	271, 736, 777, 947
PsrI	GAACNNNNNNTAC	4 cut(s)	785, 817, 1038, 1070
PstNI	CAGNNNCTG	4 cut(s)	638, 890, 1306, 1484
PsuI	RGATCY	2 cut(s)	230, 568
PvuII	CAGCTG	1 cut(s)	1190
RsaI	GTAC	4 cut(s)	747, 822, 1417, 1673
RsaNI	GTAC	4 cut(s)	746, 821, 1416, 1672
RseI	CAYNNNNRTG	3 cut(s)	138, 207, 504
SaqAI	TTAA	2 cut(s)	1179, 1590
SatI	GCNGC	5 cut(s)	115, 118, 1374, 1392, 1698
Sau96I	GGNCC	4 cut(s)	271, 736, 777, 947
SchI	GAGTC	2 cut(s)	206, 493
ScrFI	CCNGG	7 cut(s)	1022, 1202, 1279, 1385, 1398, 1437, 1461
SfaNI	GCATC	2 cut(s)	799, 1114
SfcI	CTRYAG	3 cut(s)	1044, 1476, 1494
SinI	GGWCC	4 cut(s)	271, 736, 777, 947
SmiMI	CAYNNNNRTG	3 cut(s)	138, 207, 504
SmlI	CTYRAG	2 cut(s)	769, 1675
SmoI	CTYRAG	2 cut(s)	769, 1675
Sse9I	AATT	7 cut(s)	1154, 1176, 1290, 1470, 1503, 1557, 1790
SsiI	CCGC	7 cut(s)	115, 406, 418, 580, 739, 1373, 1659
SspMI	CTAG	2 cut(s)	966, 1128
StyD4I	CCNGG	7 cut(s)	1020, 1200, 1277, 1383, 1396, 1435, 1459
StyI	CCWWGG	3 cut(s)	780, 1422, 1723
TaaI	ACNGT	8 cut(s)	37, 245, 252, 275, 664, 777, 1486, 1530
TaiI	ACGT	2 cut(s)	475, 751
TaqI	TCGA	7 cut(s)	9, 379, 475, 798, 856, 1171, 1711
TaqII	GACCGA	1 cut(s)	456
TasI	AATT	7 cut(s)	1154, 1176, 1290, 1470, 1503, 1557, 1790
TatI	WGTACW	1 cut(s)	1671
TauI	GCSGC	2 cut(s)	117, 1376
TfiI	GAWTC	1 cut(s)	898
Tru1I	TTAA	2 cut(s)	1179, 1590
Tru9I	TTAA	2 cut(s)	1179, 1590
TscAI	CASTG	5 cut(s)	873, 1143, 1327, 1354, 1365
TseFI	GTSAC	7 cut(s)	275, 401, 468, 533, 622, 1192, 1281
TseI	GCWGC	3 cut(s)	117, 1391, 1697
Tsp45I	GTSAC	7 cut(s)	275, 401, 468, 533, 622, 1192, 1281
TspDTI	ATGAA	3 cut(s)	531, 1266, 1753
TspRI	CASTG	5 cut(s)	873, 1143, 1327, 1354, 1365
Van91I	CCANNNNNTGG	1 cut(s)	956
VpaK11BI	GGWCC	4 cut(s)	271, 736, 777, 947
XapI	RAATTY	2 cut(s)	1470, 1790
XmiI	GTMKAC	1 cut(s)	1354
XmnI	GAANNNNTTC	2 cut(s)	1053, 1599
XspI	CTAG	2 cut(s)	966, 1128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.