Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007235

Physical Location & Seq

Genomic Coordinates Reverse (-)

56567151 .. 56571930

Gene Structure 4780 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

ATGGCAGAGACCAAGCGAAAAACCAGAGACGACGGAAGTAGACAACGGAGCAGCAGCAAGAAGCCGAAAACCAGCAAGAAAGGCAAGAGCGCCGATAAGGCAGAAAGAAGAGGCCCTCGCTTGCCCAACGCTCTGCGGAAGGAGCTCGACCGCTTAAACCCTAGAACCGCCGACTCCGACGAAGAGATTGGCTCCGATGAAGAGGCTTTGGGCCAGGACCTGTATGAGTATGAAGAGGGACTGCCGGAGGAGGAGTCCAAGAAGAACCGCCGGTTCGACCCCGTCGATAACCTCGATTATGAGCTACCTGAGGACTTCGAGGATGAAAATGTGTCATCTGATGATGACAATGAGGCCAGGAACGGTGGAGAGAGTGAGGCGGATGACGAGGTTAAAGAGGAAAATGATGGAAGGAGAATCGGAGAAATGCCGACCCAGACTGTTGAAGGGAGGAGGAAGAAGATGAACAATGTTGTGGTGTCGGAGGCATATCCCGAGTCTGAGTATAACCCTACTCGTGATATGTTGGAGGGTGAAGGAGCACTTAGCATTGGAGACCTTCTGGACCCTCTCCAAGGGAAACATGGTTATAGCAAACTTAAGAAGAGAGTACGTATTCTGGATAAGAAATCTACACCCATTCAAGCTCCACTTCCCAAGCCTGTGCAGCAGAGATTGGAGAGGAATGCAGCATATGACAAATCAAAGGAAGAGTTAAGAAAGTGGGAGCCAATCGTAAAGAGGAATAGGGAGGCGCCTACCATATACTTTGATGATGATAGGGATCTAGGGCCTTCATCTGTGGGAACAATAGCATCTGAATTTGAACCTCGAACTGAGTTCGAGAAGAAAATGGCTTCATTACTTTATGATGACGAGGTTATGGATGCTCACAGAAAAGATGGTTCAAGGCTCCTTGAATTAAATAAGGTATCTGCTGAAGATGAAAAGGACCGCCAGAATCGAATCGCCAAAATGCGCAGCCTTCTGTTCCGGCATGAGTTGAAGTCAAAACACATAAAAAACATCAAATCCAAAACCTATCATCGTTTGTTGAAGAAAGATAAATTGAAGGCGAACTCTTTACAAAGTCAAATGGATCCAGAAGCTTCTAAAGAACTTGCAATGAAGCAAGAGTATGAACGAGCAAAGGAACGGATGACTCTGAGGCACAAAGGCAGCTCTAAGTGGGCAAAGCGCATAAAAGAGCGTGGTCTAGATGTCCAAGATGATGGTACTCGAGCTGCTATAGCCGAACAGCAGCACCTGCATGCTCAGCTGACAAGAAAAATGAATTCTATGAAAGATAGTGACACCAGCAGTAATGACACTAGTGATGATGATGATGTGGATGTTAACTCAGACGACGAGGATAGGGCATCAAAGTTGTTAGAAAAAGCAAAGGAGAAGACACTTAAACTGTTAAATGAAGATAATGAAGTTCCAAACTCAGGAGTGCTTAGTTTACCTTTCATGAATGAGGCAGCTGCTGAAGAAGCTAAACTTGCTCTTCAAGAGTATGAATCATGGGCAAATCAATTGGGGGATTCAGGTGGGGGCAATCCAAAAGTAGGCCGTCCGAGTGGGAGAATGGTCTTCAATGGAAAGGACGCTCCAGAATCAAGTAAGAAGACTAAATCAGATAACAAGAATAGATCAGATAATTATTACGGTGATAGTGATAGTGATAGTGAAGATGACTTGGAACCCATCAGTATTTCCCAACATGGGAAATACAGAAGTAATGAATTAATGAAGGATGCCAACATTTCTCCTGTTTTACTTCATGAAGATTCTGAAAATCATAAGGATTCTTTTTTCAAGCAAAACACTGATGGTAGCGTGCAAGACCCAGGTCCCCAGGCAACACATGAAGTTTCTATTTTTGCTTCAGGCACATGGAGAAAGATGAAGAATGGAAATGACGCAAATGCCAATGCCAATGCCAAGAAGTCTCCTGCACCCCTGCAATCAGTTGAGCTTGATCAGAGTGTGCAAGAACCTGTAAAGGATTTGGATGTGGACAGTGATGCAGATAGCGAGGGACAAATGGTAGATGGGGTTCTTTCAGCTGTACCAGAACCATCATATGAACTTCCTTCCCAAGAAGAGCTAATTCGTCAAGCCTTTGCAGCAGATAACGTGGAGGATGAGTTCAAGAAAACAAAAGAGGATATTTTGAATGAGGAAAATCCCGAACCTGAAAAGCCTGTATTACTCCCTGGGTGGGGTCAGTGGACTAACATACAGAAAAAGAAAGGAATACCTTCTTATATGCAGATAGAACATGATAGTGCCAAGAAGAAGAGGGAAGAAGCCCTTAAACAAAGAAAAGACGCAAATCTCAAACATGTTATTATCTCTGAGAAGCCGCCAAATAAAAAGTCTCAGAACCTTTTCACACAATCATTGCCCTACCCTTTCACGTCCAAAGAAGTTTTTGAACAGAGCATCCGCATGCCCCTTGGTCCTGAATTCAACCCTGCAAGTATGGTTGGAGCTCTTAATCGACCTGAAGTGGTAAAGAAATCTGGTGTAATTATAAAACCCATCGAGTTTGAGGAGGTGAATGCTTATGAAAAATTAGAGGGGCACAAAAAGAGTGGACAGAAACACAAGAAGAACCGCAAGAGCAAAAGCAATAGCAATAGCGGCAAAAATATGACAAAGTTGAAGACTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000447 GO:0000460 GO:0000462 GO:0000466 GO:0000469 GO:0000472 GO:0000478 GO:0000479 GO:0000480 GO:0000966 GO:0000967 GO:0001510 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030490 GO:0030684 GO:0031167 GO:0031974 GO:0031981 GO:0032040 GO:0032259 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:1901360 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp14

Protein Analysis

894

Amino Acids

101.21

Weight (kDa)

5.71

Isoelectric Point (pI)

50.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Utp14	PF04615	146 - 853	8e-168	Utp14 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Image

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Orthologous Genes (Group: OG0007235)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G02400 AT5G08600 AT5G08600 AT5G08600 AT5G36980
fragaria_vesca	FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830 FvH4_2g25830
malus_domestica	MD03G1289000.v1.1 MD11G1308900.v1.1
prunus_persica	Prupe.8G262300_v2.0.a1 Prupe.8G262300_v2.0.a1
pyrus_communis	pycom03g22910
rosa_chinensis	RchiOBHm_Chr6g0294141
rosa_laevigata	RLG00000011895
rosa_multiflora	Rmu_sc0005037.1_g000007
rosa_roxburghii	Rroxscaffold_7G00173610
rosa_rugosa	Rorug06G0241800
rosa_samantha	Rh6AG354200 Rh6BG361100 Rh6CG368400 Rh6DG355200
rosa_wichuraiana	Rw6G030870

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2543
AarI	CACCTGC	1 cut(s)	1275
Acc16I	TGCGCA	1 cut(s)	980
Acc36I	ACCTGC	1 cut(s)	1275
AccB1I	GGYRCC	1 cut(s)	754
AccI	GTMKAC	1 cut(s)	40
AclWI	GGATC	3 cut(s)	792, 1094, 1107
AcsI	RAATTY	3 cut(s)	821, 1294, 2474
AcuI	CTGAAG	4 cut(s)	960, 1512, 1875, 2535
AcyI	GRCGYC	1 cut(s)	755
AfaI	GTAC	3 cut(s)	612, 1237, 2076
AfiI	CCNNNNNNNGG	6 cut(s)	575, 1451, 1571, 1728, 2227, 2228
AflII	CTTAAG	1 cut(s)	599
AflIII	ACRYGT	1 cut(s)	2350
AhlI	ACTAGT	1 cut(s)	1331
AjiI	CACGTC	1 cut(s)	2427
AjnI	CCWGG	5 cut(s)	213, 356, 1852, 1860, 2221
AloI	GAACNNNNNNTCC	4 cut(s)	2138, 2170, 2436, 2468
Alw21I	GWGCWC	3 cut(s)	147, 544, 2503
Alw26I	GTCTC	5 cut(s)	2, 21, 549, 1959, 2391
AlwI	GGATC	3 cut(s)	792, 1094, 1107
AlwNI	CAGNNNCTG	3 cut(s)	220, 1267, 1490
Ama87I	CYCGRG	2 cut(s)	494, 1239
AoxI	GGCC	5 cut(s)	112, 211, 354, 791, 1573
ApoI	RAATTY	3 cut(s)	821, 1294, 2474
ArsI	GACNNNNNNTTYG	2 cut(s)	2369, 2401
AseI	ATTAAT	1 cut(s)	1751
Asp700I	GAANNNNTTC	2 cut(s)	2266, 2396
AspLEI	GCGC	4 cut(s)	92, 757, 981, 1200
AspS9I	GGNCC	8 cut(s)	113, 211, 217, 565, 791, 952, 1856, 2468
AsuHPI	GGTGA	3 cut(s)	545, 1685, 2578
AvaI	CYCGRG	2 cut(s)	494, 1239
AvaII	GGWCC	5 cut(s)	217, 565, 952, 1856, 2468
AxyI	CCTNAGG	1 cut(s)	309
BaeGI	GKGCMC	1 cut(s)	2595
BamHI	GGATCC	1 cut(s)	1099
BanI	GGYRCC	1 cut(s)	754
BanII	GRGCYC	2 cut(s)	147, 2503
BauI	CACGAG	1 cut(s)	516
BbsI	GAAGAC	4 cut(s)	1415, 1588, 1637, 2681
Bbv12I	GWGCWC	3 cut(s)	147, 544, 2503
BccI	CCATC	8 cut(s)	401, 896, 1226, 1718, 1829, 2051, 2092, 2558
BceAI	ACGGC	1 cut(s)	1560
BciT130I	CCWGG	5 cut(s)	215, 358, 1854, 1862, 2223
BclI	TGATCA	1 cut(s)	1984
BcoDI	GTCTC	5 cut(s)	2, 21, 549, 1959, 2391
BcuI	ACTAGT	1 cut(s)	1331
BfaI	CTAG	4 cut(s)	162, 788, 1217, 1332
BfmI	CTRYAG	1 cut(s)	1248
BfoI	RGCGCY	2 cut(s)	93, 758
BfrI	CTTAAG	1 cut(s)	599
BfuAI	ACCTGC	1 cut(s)	1275
BglI	GCCNNNNNGGC	1 cut(s)	98
BlpI	GCTNAGC	1 cut(s)	1275
Bme1390I	CCNGG	5 cut(s)	215, 358, 1854, 1862, 2223
Bme18I	GGWCC	5 cut(s)	217, 565, 952, 1856, 2468
BmeT110I	CYCGRG	2 cut(s)	494, 1239
BmgBI	CACGTC	1 cut(s)	2427
BmgT120I	GGNCC	8 cut(s)	113, 211, 217, 565, 791, 952, 1856, 2468
BmiI	GGNNCC	8 cut(s)	193, 567, 729, 756, 914, 1101, 1707, 1858
BmrFI	CCNGG	5 cut(s)	215, 358, 1854, 1862, 2223
BmsI	GCATC	6 cut(s)	824, 877, 1388, 1750, 2020, 2460
BoxI	GACNNNNGTC	1 cut(s)	1854
BpiI	GAAGAC	4 cut(s)	1415, 1588, 1637, 2681
BplI	GAGNNNNNCTC	2 cut(s)	176, 208
BpmI	CTGGAG	1 cut(s)	1599
Bpu1102I	GCTNAGC	1 cut(s)	1275
BsaAI	YACGTR	1 cut(s)	614
BsaBI	GATNNNNATC	1 cut(s)	783
BsaHI	GRCGYC	1 cut(s)	755
BsaI	GGTCTC	2 cut(s)	2, 549
BsaJI	CCNNGG	6 cut(s)	574, 1852, 1860, 2221, 2222, 2464
BsaXI	ACNNNNNCTCC	4 cut(s)	239, 269, 2138, 2168
Bsc4I	CCNNNNNNNGG	6 cut(s)	575, 1451, 1571, 1728, 2227, 2228
Bse118I	RCCGGY	1 cut(s)	270
Bse21I	CCTNAGG	1 cut(s)	309
Bse3DI	GCAATG	2 cut(s)	1131, 2408
Bse8I	GATNNNNATC	1 cut(s)	783
BseBI	CCWGG	5 cut(s)	215, 358, 1854, 1862, 2223
BseDI	CCNNGG	6 cut(s)	574, 1852, 1860, 2221, 2222, 2464
BseGI	GGATG	9 cut(s)	328, 388, 892, 1164, 1357, 1765, 2023, 2155, 2451
BseJI	GATNNNNATC	1 cut(s)	783
BseLI	CCNNNNNNNGG	6 cut(s)	575, 1451, 1571, 1728, 2227, 2228
BseMI	GCAATG	2 cut(s)	1131, 2408
BseMII	CTCAG	9 cut(s)	300, 492, 828, 1157, 1289, 1374, 1464, 2355, 2402
BseRI	GAGGAG	4 cut(s)	263, 266, 466, 2576
BseSI	GKGCMC	1 cut(s)	2595
BsgI	GTGCAG	2 cut(s)	686, 1944
Bsh1285I	CGRYCG	1 cut(s)	151
BshFI	GGCC	5 cut(s)	114, 213, 356, 793, 1575
BshNI	GGYRCC	1 cut(s)	754
BsiEI	CGRYCG	1 cut(s)	151
BsiHKAI	GWGCWC	3 cut(s)	147, 544, 2503
BsiHKCI	CYCGRG	2 cut(s)	494, 1239
BsiSI	CCGG	3 cut(s)	245, 271, 994
BslFI	GGGAC	3 cut(s)	252, 1842, 2058
BslI	CCNNNNNNNGG	6 cut(s)	575, 1451, 1571, 1728, 2227, 2228
BsmAI	GTCTC	5 cut(s)	2, 21, 549, 1959, 2391
BsmBI	CGTCTC	1 cut(s)	21
BsmFI	GGGAC	3 cut(s)	252, 1842, 2058
BsmI	GAATGC	2 cut(s)	691, 2575
BsnI	GGCC	5 cut(s)	114, 213, 356, 793, 1575
Bso31I	GGTCTC	2 cut(s)	2, 549
BsoBI	CYCGRG	2 cut(s)	494, 1239
Bsp1286I	GDGCHC	4 cut(s)	147, 544, 2503, 2595
Bsp143I	GATC	4 cut(s)	784, 1099, 1655, 1984
Bsp1720I	GCTNAGC	1 cut(s)	1275
BspANI	GGCC	5 cut(s)	114, 213, 356, 793, 1575
BspCNI	CTCAG	9 cut(s)	301, 493, 829, 1158, 1288, 1373, 1463, 2356, 2401
BspHI	TCATGA	2 cut(s)	1473, 1786
BspLI	GGNNCC	8 cut(s)	193, 567, 729, 756, 914, 1101, 1707, 1858
BspMI	ACCTGC	1 cut(s)	1275
BspPI	GGATC	3 cut(s)	792, 1094, 1107
BspQI	GCTCTTC	2 cut(s)	1515, 2103
BspT107I	GGYRCC	1 cut(s)	754
BspTI	CTTAAG	1 cut(s)	599
BspTNI	GGTCTC	2 cut(s)	2, 549
BsrDI	GCAATG	2 cut(s)	1131, 2408
BsrFI	RCCGGY	1 cut(s)	270
BssAI	RCCGGY	1 cut(s)	270
BssECI	CCNNGG	6 cut(s)	574, 1852, 1860, 2221, 2222, 2464
BssMI	GATC	4 cut(s)	784, 1099, 1655, 1984
BssNI	GRCGYC	1 cut(s)	755
BssSI	CACGAG	1 cut(s)	516
BssT1I	CCWWGG	2 cut(s)	574, 2464
Bst2BI	CACGAG	1 cut(s)	516
Bst2UI	CCWGG	5 cut(s)	215, 358, 1854, 1862, 2223
Bst4CI	ACNGT	5 cut(s)	365, 442, 1422, 1673, 2027
Bst6I	CTCTTC	9 cut(s)	103, 177, 195, 228, 599, 705, 1515, 2103, 2300
BstACI	GRCGYC	1 cut(s)	755
BstAFI	CTTAAG	1 cut(s)	599
BstAPI	GCANNNNNTGC	1 cut(s)	1267
BstBAI	YACGTR	1 cut(s)	614
BstC8I	GCNNGC	4 cut(s)	122, 1272, 1844, 2459
BstENI	CCTNNNNNAGG	1 cut(s)	573
BstF5I	GGATG	9 cut(s)	328, 388, 892, 1164, 1357, 1765, 2023, 2155, 2451
BstH2I	RGCGCY	2 cut(s)	93, 758
BstHHI	GCGC	4 cut(s)	92, 757, 981, 1200
BstKTI	GATC	4 cut(s)	787, 1102, 1658, 1987
BstMAI	GTCTC	5 cut(s)	2, 21, 549, 1959, 2391
BstMBI	GATC	4 cut(s)	784, 1099, 1655, 1984
BstMCI	CGRYCG	1 cut(s)	151
BstNI	CCWGG	5 cut(s)	215, 358, 1854, 1862, 2223
BstNSI	RCATGY	3 cut(s)	1274, 2354, 2461
BstPAI	GACNNNNGTC	1 cut(s)	1854
BstSCI	CCNGG	5 cut(s)	213, 356, 1852, 1860, 2221
BstSFI	CTRYAG	1 cut(s)	1248
BstSLI	GKGCMC	1 cut(s)	2595
BstSNI	TACGTA	1 cut(s)	614
BstV2I	GAAGAC	4 cut(s)	1415, 1588, 1637, 2681
BstX2I	RGATCY	2 cut(s)	784, 1099
BstXI	CCANNNNNNTGG	1 cut(s)	1232
BstYI	RGATCY	2 cut(s)	784, 1099
Bsu36I	CCTNAGG	1 cut(s)	309
BsuRI	GGCC	5 cut(s)	114, 213, 356, 793, 1575
BtrI	CACGTC	1 cut(s)	2427
BtsCI	GGATG	9 cut(s)	328, 388, 892, 1164, 1357, 1765, 2023, 2155, 2451
BtsIMutI	CAGTG	3 cut(s)	1830, 2032, 2240
BveI	ACCTGC	1 cut(s)	1275
Cac8I	GCNNGC	4 cut(s)	122, 1272, 1844, 2459
CaiI	CAGNNNCTG	3 cut(s)	220, 1267, 1490
CciI	TCATGA	2 cut(s)	1473, 1786
CfoI	GCGC	4 cut(s)	92, 757, 981, 1200
Cfr10I	RCCGGY	1 cut(s)	270
Cfr13I	GGNCC	8 cut(s)	113, 211, 217, 565, 791, 952, 1856, 2468
CseI	GACGC	3 cut(s)	1619, 1934, 2345
Csp6I	GTAC	3 cut(s)	611, 1236, 2075
CspCI	CAANNNNNGTGG	2 cut(s)	2584, 2619
CviQI	GTAC	3 cut(s)	611, 1236, 2075
DinI	GGCGCC	1 cut(s)	756
DpnI	GATC	4 cut(s)	786, 1101, 1657, 1986
DpnII	GATC	4 cut(s)	784, 1099, 1655, 1984
Eam1104I	CTCTTC	9 cut(s)	103, 177, 195, 228, 599, 705, 1515, 2103, 2300
EarI	CTCTTC	9 cut(s)	103, 177, 195, 228, 599, 705, 1515, 2103, 2300
EciI	GGCGGA	1 cut(s)	395
Ecl136II	GAGCTC	2 cut(s)	145, 2501
Eco105I	TACGTA	1 cut(s)	614
Eco130I	CCWWGG	2 cut(s)	574, 2464
Eco24I	GRGCYC	2 cut(s)	147, 2503
Eco31I	GGTCTC	2 cut(s)	2, 549
Eco47I	GGWCC	5 cut(s)	217, 565, 952, 1856, 2468
Eco53kI	GAGCTC	2 cut(s)	145, 2501
Eco57I	CTGAAG	4 cut(s)	960, 1512, 1875, 2535
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	2 cut(s)	494, 1239
EcoICRI	GAGCTC	2 cut(s)	145, 2501
EcoNI	CCTNNNNNAGG	1 cut(s)	573
EcoO109I	RGGNCCY	4 cut(s)	113, 217, 791, 1856
EcoRI	GAATTC	2 cut(s)	1294, 2474
EcoRII	CCWGG	5 cut(s)	213, 356, 1852, 1860, 2221
EcoT14I	CCWWGG	2 cut(s)	574, 2464
EcoT38I	GRGCYC	2 cut(s)	147, 2503
EgeI	GGCGCC	1 cut(s)	756
EheI	GGCGCC	1 cut(s)	756
ErhI	CCWWGG	2 cut(s)	574, 2464
Esp3I	CGTCTC	1 cut(s)	21
FalI	AAGNNNNNCTT	8 cut(s)	528, 560, 636, 668, 1488, 1520, 2304, 2336
FaqI	GGGAC	3 cut(s)	252, 1842, 2058
FauNDI	CATATG	2 cut(s)	694, 2089
FbaI	TGATCA	1 cut(s)	1984
FblI	GTMKAC	1 cut(s)	40
FokI	GGATG	9 cut(s)	335, 395, 899, 1171, 1364, 1772, 2030, 2162, 2438
FriOI	GRGCYC	2 cut(s)	147, 2503
FspBI	CTAG	4 cut(s)	162, 788, 1217, 1332
FspI	TGCGCA	1 cut(s)	980
GlaI	GCGC	4 cut(s)	91, 756, 980, 1199
GsuI	CTGGAG	1 cut(s)	1599
HaeII	RGCGCY	2 cut(s)	93, 758
HaeIII	GGCC	5 cut(s)	114, 213, 356, 793, 1575
HapII	CCGG	3 cut(s)	245, 271, 994
HgaI	GACGC	3 cut(s)	1619, 1934, 2345
HhaI	GCGC	4 cut(s)	92, 757, 981, 1200
Hin1I	GRCGYC	1 cut(s)	755
Hin6I	GCGC	4 cut(s)	90, 755, 979, 1198
HinP1I	GCGC	4 cut(s)	90, 755, 979, 1198
HincII	GTYRAC	1 cut(s)	1357
HindII	GTYRAC	1 cut(s)	1357
HindIII	AAGCTT	1 cut(s)	1107
HpaI	GTTAAC	1 cut(s)	1357
HpaII	CCGG	3 cut(s)	245, 271, 994
HphI	GGTGA	3 cut(s)	545, 1685, 2578
Hpy166II	GTNNAC	6 cut(s)	41, 1357, 1466, 2023, 2238, 2606
Hpy8I	GTNNAC	6 cut(s)	41, 1357, 1466, 2023, 2238, 2606
Hpy99I	CGWCG	4 cut(s)	35, 182, 287, 1370
HpyCH4III	ACNGT	5 cut(s)	365, 442, 1422, 1673, 2027
HpyCH4IV	ACGT	3 cut(s)	613, 2142, 2426
HpySE526I	ACGT	3 cut(s)	613, 2142, 2426
Hsp92I	GRCGYC	1 cut(s)	755
HspAI	GCGC	4 cut(s)	90, 755, 979, 1198
KasI	GGCGCC	1 cut(s)	754
Ksp22I	TGATCA	1 cut(s)	1984
KspAI	GTTAAC	1 cut(s)	1357
Kzo9I	GATC	4 cut(s)	784, 1099, 1655, 1984
LguI	GCTCTTC	2 cut(s)	1515, 2103
LmnI	GCTCC	9 cut(s)	48, 142, 197, 539, 652, 727, 918, 1618, 2498
LweI	GCATC	6 cut(s)	824, 877, 1388, 1750, 2020, 2460
MaeI	CTAG	4 cut(s)	162, 788, 1217, 1332
MaeII	ACGT	3 cut(s)	613, 2142, 2426
MaeIII	GTNAC	1 cut(s)	1310
MalI	GATC	4 cut(s)	786, 1101, 1657, 1986
MboI	GATC	4 cut(s)	784, 1099, 1655, 1984
MfeI	CAATTG	1 cut(s)	1538
MflI	RGATCY	2 cut(s)	784, 1099
MhlI	GDGCHC	4 cut(s)	147, 544, 2503, 2595
Mly113I	GGCGCC	1 cut(s)	755
MlyI	GAGTC	4 cut(s)	167, 263, 506, 1156
MmeI	TCCRAC	4 cut(s)	201, 462, 507, 2476
MroXI	GAANNNNTTC	2 cut(s)	2266, 2396
MslI	CAYNNNNRTG	3 cut(s)	1269, 2292, 2456
MspA1I	CMGCKG	3 cut(s)	1279, 1487, 2072
MspCI	CTTAAG	1 cut(s)	599
MspI	CCGG	3 cut(s)	245, 271, 994
MspR9I	CCNGG	5 cut(s)	215, 358, 1854, 1862, 2223
MunI	CAATTG	1 cut(s)	1538
Mva1269I	GAATGC	2 cut(s)	691, 2575
MvaI	CCWGG	5 cut(s)	215, 358, 1854, 1862, 2223
NarI	GGCGCC	1 cut(s)	755
NdeI	CATATG	2 cut(s)	694, 2089
NdeII	GATC	4 cut(s)	784, 1099, 1655, 1984
NlaIV	GGNNCC	8 cut(s)	193, 567, 729, 756, 914, 1101, 1707, 1858
NmuCI	GTSAC	1 cut(s)	1310
NsbI	TGCGCA	1 cut(s)	980
NspI	RCATGY	3 cut(s)	1274, 2354, 2461
PaeI	GCATGC	2 cut(s)	1274, 2461
PaeR7I	CTCGAG	1 cut(s)	1239
PagI	TCATGA	2 cut(s)	1473, 1786
PaqCI	CACCTGC	1 cut(s)	1275
PasI	CCCWGGG	1 cut(s)	2222
PciI	ACATGT	1 cut(s)	2350
PciSI	GCTCTTC	2 cut(s)	1515, 2103
PcsI	WCGNNNNNNNCGW	2 cut(s)	282, 291
PctI	GAATGC	2 cut(s)	691, 2575
PdmI	GAANNNNTTC	2 cut(s)	2266, 2396
PfeI	GAWTC	8 cut(s)	417, 961, 966, 1523, 1547, 1619, 1793, 1811
PflFI	GACNNNGTC	1 cut(s)	281
PleI	GAGTC	4 cut(s)	167, 262, 505, 1156
PluTI	GGCGCC	1 cut(s)	758
PpsI	GAGTC	4 cut(s)	167, 262, 505, 1156
Ppu21I	YACGTR	1 cut(s)	614
PpuMI	RGGWCCY	2 cut(s)	217, 1856
PscI	ACATGT	1 cut(s)	2350
PshAI	GACNNNNGTC	1 cut(s)	1854
PshBI	ATTAAT	1 cut(s)	1751
PsiI	TTATAA	1 cut(s)	2543
Psp124BI	GAGCTC	2 cut(s)	147, 2503
Psp5II	RGGWCCY	2 cut(s)	217, 1856
Psp6I	CCWGG	5 cut(s)	213, 356, 1852, 1860, 2221
PspGI	CCWGG	5 cut(s)	213, 356, 1852, 1860, 2221
PspN4I	GGNNCC	8 cut(s)	193, 567, 729, 756, 914, 1101, 1707, 1858
PspPI	GGNCC	8 cut(s)	113, 211, 217, 565, 791, 952, 1856, 2468
PspPPI	RGGWCCY	2 cut(s)	217, 1856
PspXI	VCTCGAGB	1 cut(s)	1239
PsrI	GAACNNNNNNTAC	2 cut(s)	2046, 2078
PstNI	CAGNNNCTG	3 cut(s)	220, 1267, 1490
PsuI	RGATCY	2 cut(s)	784, 1099
PsyI	GACNNNGTC	1 cut(s)	281
PvuII	CAGCTG	3 cut(s)	1279, 1487, 2072
RsaI	GTAC	3 cut(s)	612, 1237, 2076
RsaNI	GTAC	3 cut(s)	611, 1236, 2075
RseI	CAYNNNNRTG	3 cut(s)	1269, 2292, 2456
SacI	GAGCTC	2 cut(s)	147, 2503
SapI	GCTCTTC	2 cut(s)	1515, 2103
Sau3AI	GATC	4 cut(s)	784, 1099, 1655, 1984
Sau96I	GGNCC	8 cut(s)	113, 211, 217, 565, 791, 952, 1856, 2468
SchI	GAGTC	4 cut(s)	167, 263, 506, 1156
ScrFI	CCNGG	5 cut(s)	215, 358, 1854, 1862, 2223
SduI	GDGCHC	4 cut(s)	147, 544, 2503, 2595
SfaNI	GCATC	6 cut(s)	824, 877, 1388, 1750, 2020, 2460
SfcI	CTRYAG	1 cut(s)	1248
SfoI	GGCGCC	1 cut(s)	756
Sfr274I	CTCGAG	1 cut(s)	1239
SinI	GGWCC	5 cut(s)	217, 565, 952, 1856, 2468
SlaI	CTCGAG	1 cut(s)	1239
SmiMI	CAYNNNNRTG	3 cut(s)	1269, 2292, 2456
SmlI	CTYRAG	2 cut(s)	599, 1239
SmoI	CTYRAG	2 cut(s)	599, 1239
SnaBI	TACGTA	1 cut(s)	614
SpeI	ACTAGT	1 cut(s)	1331
SphI	GCATGC	2 cut(s)	1274, 2461
SspDI	GGCGCC	1 cut(s)	754
SspMI	CTAG	4 cut(s)	162, 788, 1217, 1332
SstI	GAGCTC	2 cut(s)	147, 2503
StyD4I	CCNGG	5 cut(s)	213, 356, 1852, 1860, 2221
StyI	CCWWGG	2 cut(s)	574, 2464
TaaI	ACNGT	5 cut(s)	365, 442, 1422, 1673, 2027
TaiI	ACGT	3 cut(s)	616, 2145, 2429
TauI	GCSGC	2 cut(s)	2374, 2655
TfiI	GAWTC	8 cut(s)	417, 961, 966, 1523, 1547, 1619, 1793, 1811
TscAI	CASTG	3 cut(s)	1837, 2032, 2240
TseFI	GTSAC	1 cut(s)	1310
Tsp45I	GTSAC	1 cut(s)	1310
TspGWI	ACGGA	3 cut(s)	48, 61, 1171
TspRI	CASTG	3 cut(s)	1837, 2032, 2240
Tth111I	GACNNNGTC	1 cut(s)	281
Vha464I	CTTAAG	1 cut(s)	599
VpaK11BI	GGWCC	5 cut(s)	217, 565, 952, 1856, 2468
VspI	ATTAAT	1 cut(s)	1751
XagI	CCTNNNNNAGG	1 cut(s)	573
XapI	RAATTY	3 cut(s)	821, 1294, 2474
XbaI	TCTAGA	1 cut(s)	1216
XceI	RCATGY	3 cut(s)	1274, 2354, 2461
XcmI	CCANNNNNNNNNTGG	1 cut(s)	581
XhoI	CTCGAG	1 cut(s)	1239
XmiI	GTMKAC	1 cut(s)	40
XmnI	GAANNNNTTC	2 cut(s)	2266, 2396
XspI	CTAG	4 cut(s)	162, 788, 1217, 1332

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.