RchiOBHm_Chr5g0003641

Chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0008846
Physical Location & Seq
Reverse (-)
2263787 .. 2268402
4616 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2010 bp
ATGACAGGGATTGATGCAGAGCTATGCATGGAGGAGTTTGTGGCAAAAATCGAAGTGGAGGATCAGGAGAAGTTGGAGCTGGAGTATGGTGTTGAAATCGAAGCAGAGTCCGTGGTGGATGCGTGCCGCATCATTAAGCAGTACCCTGATGTTTTTCAGTTTAATTGTAGAGGAACACTGGATGATACCGAGAGGGCTATTTTGCAAATGAAGGTAGTAGAGCTTCTGGAGGAGGCTTGTTTAAGATTGAGGCATAAGTTTGACTACTCGAGAGAAGGAGAGGATGAACTAGAGGTGGGGGAGTACAGGTTGCATCGTGCACTTGTTGAGTTGAATGAAATTGAAAAAGAAAGAGAGCCATCCACCCAAAAATGGAGGGATCGTGTGGCCAAGGAACGTGAAGAACTAAACGATATGTGGAACAAGTTGGAGATAAAGTGGTTGGAATTACAAGCTTCACGGCAGAGATATGACATCAGAGCTCGGGAGGCACTTTTGTTGGAAAGGATGCGGGAAGGGCTGGTTTACTATTTAAATGAGGAAAGATCGAAGGAAAATTTCTCTGGGTTGTTGCAATGGCTTGATGAACATGTGACTGAGCTTTTATATACAACTCGCAAAGATTTTAAGCATGAGCTGACCGTTAGCTCGCATGCTATTGCACTGGCAGCAAGCTTGTTGATTGATGCTCCACCATCGCAGTTGCTTTCCGAATCACCAGTACTTCAGAACCATGAATCAATTAGGAGGGTAATTGGACAAGAACATGTTCTACTTGCAGTCAGTGCTGCTTTATCGAGGCAGAGGCCTCCACGACGCCCTATTGGATCCTTCATCTTCATGTGTGGATCCGGTTGTGGGAGGACAGAAATTGCCAAACTTTTGGCCACTCTAGTCTTTGGTAAAAAAGACATGCTAACCGAGTTTGATCTTGAAAAGTACACAGGACCAAATTCTTTATCACGCCTTCTTGGTGTTCTCTGTAGTAGCCACATTGAACCAGGCAAGAAGGGAGAGCTATGTGTTAAGAAGAGGCATCTAGGTGTCATTTTGTTTGACAATGTTGACAAGGCTCCTGCGCCTATTATTGAGCTTTTGACCCAGATTATAGGCTTTGGTTATCTAGTAGATGGTAATGGGAATAGTGTTGACTTCACTAATACGTTGATCATCATGACGACAAATATTGGATGTGATCAATTGTGGCCGTGGAATTGCAAATGTGCTGATGAAGTTCAAAAGTTTCCTGTCAAGGAAGGATTATTTGATGATGCATGGGAAAGAAATCATAATTCCTGTTACCTATCACTTCTGAGGGAGGTAAACAAAAATCATTTTGGACCTCAATTTCTTGAATATGTAGATGATGTGATTGGATTTAGGTCTCTTTCCTCTCAACAATTGAAGGCTGTTGCTAGGCTCCAGCTAAGGGACCTTGCCGTGTACATGACCCAGAAGGGCCTCATCATTTACTCCTCTGAAGCTGCATTGGATATTATTGTGCGGAGATCAGCTTGGCCTGGAGATCGAATTAAAGGTGGAGAGAAAATAAGGATGTGGCTGGAACAGAACTTGGTCCCTGTGCTCTTCGAGATGATTTCAAAGAATGAGATATCTGATTTATCTATCATGTATATTGAAGCGTCAGTGGAGTCAGATCAATTGTCTTTCAGAATGGAAAAGACGGGACGTCTATTAGAAGAACGAGACGTTAATCAGTTAGCCTCTTTAAAGGAATTGAGATTAATGTACCAGAAAGAGAAAGAAAGAGCAAAGCGAATCTACATGCTGAGAAAATTTCAGAACAAATTGATGGCTAGTGCAAATGCTGGATTTGATCATGTAACGAATGTTGTTCAAGATCTGGTCAATATAATTCAGGATCTCATTACAATTCCCGGTAGCATCGTCAGGTCCTTCCTGGATAATCCTAAAAAGGTGGCAATGGCGGCCTTGAATGAGGATGAGGTTAGGCAGAACAAGAGGGCAAAAAAAGGGGCCAAGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04213 map04213
Pfam Domains
Protein Families
AAA_2

Protein Analysis

669

Amino Acids

76.86

Weight (kDa)

5.65

Isoelectric Point (pI)

46.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_2 PF07724 273 - 402 4.3e-22 AAA domain (Cdc48 subfamily)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1693
AciI CCGC 4 cut(s) 127, 511, 1504, 1949
AclWI GGATC 7 cut(s) 69, 387, 822, 835, 843, 856, 1890
AcoI YGGCCR 3 cut(s) 387, 885, 1205
AcsI RAATTY 3 cut(s) 556, 952, 1796
AcuI CTGAAG 2 cut(s) 710, 1500
AcyI GRCGYC 2 cut(s) 817, 1690
AfaI GTAC 6 cut(s) 143, 305, 723, 941, 1445, 1751
AfiI CCNNNNNNNGG 3 cut(s) 372, 858, 1429
AflIII ACRYGT 2 cut(s) 589, 766
AhdI GACNNNNNGTC 1 cut(s) 1689
AjnI CCWGG 3 cut(s) 1000, 1519, 1920
Alw21I GWGCWC 3 cut(s) 322, 484, 1587
Alw26I GTCTC 2 cut(s) 1389, 1701
Alw44I GTGCAC 1 cut(s) 318
AlwI GGATC 7 cut(s) 69, 387, 822, 835, 843, 856, 1890
Ama87I CYCGRG 2 cut(s) 268, 483
AoxI GGCC 8 cut(s) 387, 806, 885, 1205, 1459, 1517, 1950, 1998
ApaLI GTGCAC 1 cut(s) 318
ApeKI GCWGC 3 cut(s) 668, 788, 1484
ApoI RAATTY 3 cut(s) 556, 952, 1796
AseI ATTAAT 1 cut(s) 1745
Asp700I GAANNNNTTC 1 cut(s) 768
AspLEI GCGC 1 cut(s) 1081
AspS9I GGNCC 7 cut(s) 947, 1340, 1432, 1459, 1576, 1914, 1998
AsuC2I CCSGG 1 cut(s) 1899
AsuHPI GGTGA 1 cut(s) 708
AvaI CYCGRG 2 cut(s) 268, 483
AvaII GGWCC 5 cut(s) 947, 1340, 1432, 1576, 1914
BaeGI GKGCMC 1 cut(s) 322
BalI TGGCCA 2 cut(s) 389, 887
BamHI GGATCC 2 cut(s) 827, 848
BanII GRGCYC 1 cut(s) 484
BarI GAAGNNNNNNTAC 2 cut(s) 207, 239
Bbv12I GWGCWC 3 cut(s) 322, 484, 1587
BbvI GCAGC 3 cut(s) 680, 775, 1471
BccI CCATC 4 cut(s) 367, 703, 1124, 1807
BceAI ACGGC 3 cut(s) 476, 1192, 1424
BciT130I CCWGG 3 cut(s) 1002, 1521, 1922
BclI TGATCA 3 cut(s) 1167, 1195, 1837
BcnI CCSGG 1 cut(s) 1899
BcoDI GTCTC 2 cut(s) 1389, 1701
BfaI CTAG 6 cut(s) 290, 893, 1040, 1124, 1416, 1818
BfmI CTRYAG 1 cut(s) 982
BglII AGATCT 1 cut(s) 1861
BisI GCNGC 5 cut(s) 127, 669, 789, 1485, 1950
BlsI GCNGC 5 cut(s) 128, 670, 790, 1486, 1951
BmcAI AGTACT 1 cut(s) 723
Bme1390I CCNGG 4 cut(s) 1002, 1521, 1899, 1922
Bme18I GGWCC 5 cut(s) 947, 1340, 1432, 1576, 1914
BmeRI GACNNNNNGTC 1 cut(s) 1689
BmeT110I CYCGRG 2 cut(s) 268, 483
BmgT120I GGNCC 7 cut(s) 947, 1340, 1432, 1459, 1576, 1914, 1998
BmiI GGNNCC 7 cut(s) 829, 850, 1074, 1421, 1433, 1578, 1999
BmrFI CCNGG 4 cut(s) 1002, 1521, 1899, 1922
BmsI GCATC 9 cut(s) 4, 109, 138, 322, 498, 676, 1045, 1261, 1914
BpmI CTGGAG 4 cut(s) 101, 248, 1406, 1542
Bpu10I CCTNAGC 1 cut(s) 1427
BpuMI CCSGG 1 cut(s) 1899
BsaHI GRCGYC 2 cut(s) 817, 1690
BsaI GGTCTC 1 cut(s) 1389
BsaJI CCNNGG 4 cut(s) 111, 390, 1208, 2001
BsaWI WCCGGW 1 cut(s) 851
BsaXI ACNNNNNCTCC 8 cut(s) 68, 98, 293, 323, 367, 397, 422, 452
Bsc4I CCNNNNNNNGG 3 cut(s) 372, 858, 1429
Bse1I ACTGG 3 cut(s) 183, 669, 719
Bse3DI GCAATG 2 cut(s) 581, 1950
BseBI CCWGG 3 cut(s) 1002, 1521, 1922
BseDI CCNNGG 4 cut(s) 111, 390, 1208, 2001
BseGI GGATG 8 cut(s) 124, 187, 289, 359, 513, 1196, 1560, 1969
BseLI CCNNNNNNNGG 3 cut(s) 372, 858, 1429
BseMI GCAATG 2 cut(s) 581, 1950
BseMII CTCAG 3 cut(s) 588, 1304, 1781
BseNI ACTGG 3 cut(s) 183, 669, 719
BseRI GAGGAG 3 cut(s) 47, 245, 1465
BseSI GKGCMC 1 cut(s) 322
BseXI GCAGC 3 cut(s) 680, 775, 1471
BshFI GGCC 8 cut(s) 389, 808, 887, 1207, 1461, 1519, 1952, 2000
BsiHKAI GWGCWC 3 cut(s) 322, 484, 1587
BsiHKCI CYCGRG 2 cut(s) 268, 483
BsiSI CCGG 2 cut(s) 852, 1899
BslFI GGGAC 3 cut(s) 1445, 1562, 1701
BslI CCNNNNNNNGG 3 cut(s) 372, 858, 1429
BsmAI GTCTC 2 cut(s) 1389, 1701
BsmBI CGTCTC 1 cut(s) 1701
BsmFI GGGAC 3 cut(s) 1445, 1562, 1701
BsnI GGCC 8 cut(s) 389, 808, 887, 1207, 1461, 1519, 1952, 2000
Bso31I GGTCTC 1 cut(s) 1389
BsoBI CYCGRG 2 cut(s) 268, 483
Bsp1286I GDGCHC 3 cut(s) 322, 484, 1587
Bsp1407I TGTACA 1 cut(s) 1443
BspACI CCGC 4 cut(s) 127, 511, 1504, 1949
BspANI GGCC 8 cut(s) 389, 808, 887, 1207, 1461, 1519, 1952, 2000
BspCNI CTCAG 3 cut(s) 589, 1305, 1782
BspHI TCATGA 1 cut(s) 1173
BspLI GGNNCC 7 cut(s) 829, 850, 1074, 1421, 1433, 1578, 1999
BspPI GGATC 7 cut(s) 69, 387, 822, 835, 843, 856, 1890
BspQI GCTCTTC 1 cut(s) 1592
BspTNI GGTCTC 1 cut(s) 1389
BsrDI GCAATG 2 cut(s) 581, 1950
BsrGI TGTACA 1 cut(s) 1443
BsrI ACTGG 3 cut(s) 183, 669, 719
BssECI CCNNGG 4 cut(s) 111, 390, 1208, 2001
BssNI GRCGYC 2 cut(s) 817, 1690
BssT1I CCWWGG 2 cut(s) 390, 2001
Bst2UI CCWGG 3 cut(s) 1002, 1521, 1922
Bst4CI ACNGT 1 cut(s) 643
Bst6I CTCTTC 2 cut(s) 1025, 1592
BstACI GRCGYC 2 cut(s) 817, 1690
BstAPI GCANNNNNTGC 1 cut(s) 785
BstAUI TGTACA 1 cut(s) 1443
BstC8I GCNNGC 4 cut(s) 124, 650, 654, 673
BstDEI CTNAG 4 cut(s) 597, 1313, 1427, 1790
BstDSI CCRYGG 2 cut(s) 111, 1208
BstF5I GGATG 8 cut(s) 124, 187, 289, 359, 513, 1196, 1560, 1969
BstHHI GCGC 1 cut(s) 1081
BstMAI GTCTC 2 cut(s) 1389, 1701
BstMWI GCNNNNNNNGC 5 cut(s) 488, 517, 668, 785, 1949
BstNI CCWGG 3 cut(s) 1002, 1521, 1922
BstNSI RCATGY 5 cut(s) 593, 656, 770, 916, 1789
BstSCI CCNGG 4 cut(s) 1000, 1519, 1897, 1920
BstSFI CTRYAG 1 cut(s) 982
BstSLI GKGCMC 1 cut(s) 322
BstV1I GCAGC 3 cut(s) 680, 775, 1471
BstX2I RGATCY 4 cut(s) 827, 848, 1861, 1882
BstXI CCANNNNNNTGG 1 cut(s) 883
BstYI RGATCY 4 cut(s) 827, 848, 1861, 1882
BsuRI GGCC 8 cut(s) 389, 808, 887, 1207, 1461, 1519, 1952, 2000
BtgI CCRYGG 2 cut(s) 111, 1208
BtgZI GCGATG 1 cut(s) 681
BtsCI GGATG 8 cut(s) 124, 187, 289, 359, 513, 1196, 1560, 1969
BtsIMutI CAGTG 4 cut(s) 176, 662, 790, 1653
Cac8I GCNNGC 4 cut(s) 124, 650, 654, 673
CciI TCATGA 1 cut(s) 1173
CfoI GCGC 1 cut(s) 1081
Cfr13I GGNCC 7 cut(s) 947, 1340, 1432, 1459, 1576, 1914, 1998
CseI GACGC 2 cut(s) 825, 1632
Csp6I GTAC 6 cut(s) 142, 304, 722, 940, 1444, 1750
CviQI GTAC 6 cut(s) 142, 304, 722, 940, 1444, 1750
DdeI CTNAG 4 cut(s) 597, 1313, 1427, 1790
DraI TTTAAA 2 cut(s) 534, 1731
DriI GACNNNNNGTC 1 cut(s) 1689
EaeI YGGCCR 3 cut(s) 387, 885, 1205
Eam1104I CTCTTC 2 cut(s) 1025, 1592
Eam1105I GACNNNNNGTC 1 cut(s) 1689
EarI CTCTTC 2 cut(s) 1025, 1592
Ecl136II GAGCTC 1 cut(s) 482
Eco130I CCWWGG 2 cut(s) 390, 2001
Eco147I AGGCCT 1 cut(s) 808
Eco24I GRGCYC 1 cut(s) 484
Eco31I GGTCTC 1 cut(s) 1389
Eco32I GATATC 1 cut(s) 1614
Eco47I GGWCC 5 cut(s) 947, 1340, 1432, 1576, 1914
Eco53kI GAGCTC 1 cut(s) 482
Eco57I CTGAAG 2 cut(s) 710, 1500
Eco88I CYCGRG 2 cut(s) 268, 483
EcoICRI GAGCTC 1 cut(s) 482
EcoO109I RGGNCCY 3 cut(s) 1432, 1459, 1914
EcoRII CCWGG 3 cut(s) 1000, 1519, 1920
EcoRV GATATC 1 cut(s) 1614
EcoT14I CCWWGG 2 cut(s) 390, 2001
EcoT22I ATGCAT 2 cut(s) 29, 1276
EcoT38I GRGCYC 1 cut(s) 484
ErhI CCWWGG 2 cut(s) 390, 2001
Esp3I CGTCTC 1 cut(s) 1701
FaqI GGGAC 3 cut(s) 1445, 1562, 1701
FauI CCCGC 1 cut(s) 504
FbaI TGATCA 3 cut(s) 1167, 1195, 1837
Fnu4HI GCNGC 5 cut(s) 127, 669, 789, 1485, 1950
FokI GGATG 8 cut(s) 131, 194, 296, 346, 520, 1203, 1567, 1976
FriOI GRGCYC 1 cut(s) 484
Fsp4HI GCNGC 5 cut(s) 127, 669, 789, 1485, 1950
FspBI CTAG 6 cut(s) 290, 893, 1040, 1124, 1416, 1818
GlaI GCGC 1 cut(s) 1080
GluI GCNGC 5 cut(s) 127, 669, 789, 1485, 1950
GsuI CTGGAG 4 cut(s) 101, 248, 1406, 1542
HaeIII GGCC 8 cut(s) 389, 808, 887, 1207, 1461, 1519, 1952, 2000
HapII CCGG 2 cut(s) 852, 1899
HgaI GACGC 2 cut(s) 825, 1632
HhaI GCGC 1 cut(s) 1081
Hin1I GRCGYC 2 cut(s) 817, 1690
Hin6I GCGC 1 cut(s) 1079
HinP1I GCGC 1 cut(s) 1079
HincII GTYRAC 2 cut(s) 1066, 1150
HindII GTYRAC 2 cut(s) 1066, 1150
HindIII AAGCTT 2 cut(s) 453, 673
HinfI GANTC 5 cut(s) 107, 713, 737, 1652, 1779
HpaII CCGG 2 cut(s) 852, 1899
HphI GGTGA 1 cut(s) 708
Hpy166II GTNNAC 7 cut(s) 320, 526, 942, 1066, 1150, 1324, 1444
Hpy188I TCNGA 9 cut(s) 479, 712, 729, 1314, 1480, 1618, 1657, 1673, 1803
Hpy8I GTNNAC 7 cut(s) 320, 526, 942, 1066, 1150, 1324, 1444
Hpy99I CGWCG 1 cut(s) 819
HpyCH4III ACNGT 1 cut(s) 643
HpyCH4IV ACGT 4 cut(s) 397, 1163, 1690, 1710
HpyF10VI GCNNNNNNNGC 5 cut(s) 488, 517, 668, 785, 1949
HpyF3I CTNAG 4 cut(s) 597, 1313, 1427, 1790
HpySE526I ACGT 4 cut(s) 397, 1163, 1690, 1710
Hsp92I GRCGYC 2 cut(s) 817, 1690
HspAI GCGC 1 cut(s) 1079
Ksp22I TGATCA 3 cut(s) 1167, 1195, 1837
LguI GCTCTTC 1 cut(s) 1592
LmnI GCTCC 4 cut(s) 76, 694, 1078, 1425
Lsp1109I GCAGC 3 cut(s) 680, 775, 1471
LweI GCATC 9 cut(s) 4, 109, 138, 322, 498, 676, 1045, 1261, 1914
MaeI CTAG 6 cut(s) 290, 893, 1040, 1124, 1416, 1818
MaeII ACGT 4 cut(s) 397, 1163, 1690, 1710
MaeIII GTNAC 3 cut(s) 592, 1298, 1843
MboII GAAGA 5 cut(s) 413, 829, 1042, 1579, 1712
MfeI CAATTG 3 cut(s) 1199, 1400, 1661
MflI RGATCY 4 cut(s) 827, 848, 1861, 1882
MhlI GDGCHC 3 cut(s) 322, 484, 1587
MlsI TGGCCA 2 cut(s) 389, 887
MluNI TGGCCA 2 cut(s) 389, 887
MlyI GAGTC 2 cut(s) 116, 1661
MmeI TCCRAC 4 cut(s) 54, 408, 423, 480
Mox20I TGGCCA 2 cut(s) 389, 887
Mph1103I ATGCAT 2 cut(s) 29, 1276
MroXI GAANNNNTTC 1 cut(s) 768
MscI TGGCCA 2 cut(s) 389, 887
MslI CAYNNNNRTG 2 cut(s) 839, 1041
Msp20I TGGCCA 2 cut(s) 389, 887
MspI CCGG 2 cut(s) 852, 1899
MspR9I CCNGG 4 cut(s) 1002, 1521, 1899, 1922
MunI CAATTG 3 cut(s) 1199, 1400, 1661
MvaI CCWGG 3 cut(s) 1002, 1521, 1922
MwoI GCNNNNNNNGC 5 cut(s) 488, 517, 668, 785, 1949
NciI CCSGG 1 cut(s) 1899
NlaIV GGNNCC 7 cut(s) 829, 850, 1074, 1421, 1433, 1578, 1999
NmuCI GTSAC 1 cut(s) 592
NsiI ATGCAT 2 cut(s) 29, 1276
NspI RCATGY 5 cut(s) 593, 656, 770, 916, 1789
PaeI GCATGC 1 cut(s) 656
PaeR7I CTCGAG 1 cut(s) 268
PagI TCATGA 1 cut(s) 1173
PceI AGGCCT 1 cut(s) 808
PciI ACATGT 2 cut(s) 589, 766
PciSI GCTCTTC 1 cut(s) 1592
PdmI GAANNNNTTC 1 cut(s) 768
PfeI GAWTC 3 cut(s) 713, 737, 1779
PfoI TCCNGGA 1 cut(s) 1920
PkrI GCNGC 5 cut(s) 128, 670, 790, 1486, 1951
PleI GAGTC 2 cut(s) 115, 1660
PpsI GAGTC 2 cut(s) 115, 1660
PpuMI RGGWCCY 2 cut(s) 1432, 1914
PscI ACATGT 2 cut(s) 589, 766
PshBI ATTAAT 1 cut(s) 1745
Psp124BI GAGCTC 1 cut(s) 484
Psp5II RGGWCCY 2 cut(s) 1432, 1914
Psp6I CCWGG 3 cut(s) 1000, 1519, 1920
PspGI CCWGG 3 cut(s) 1000, 1519, 1920
PspN4I GGNNCC 7 cut(s) 829, 850, 1074, 1421, 1433, 1578, 1999
PspPI GGNCC 7 cut(s) 947, 1340, 1432, 1459, 1576, 1914, 1998
PspPPI RGGWCCY 2 cut(s) 1432, 1914
PsrI GAACNNNNNNTAC 2 cut(s) 756, 788
PsuI RGATCY 4 cut(s) 827, 848, 1861, 1882
RsaI GTAC 6 cut(s) 143, 305, 723, 941, 1445, 1751
RsaNI GTAC 6 cut(s) 142, 304, 722, 940, 1444, 1750
RseI CAYNNNNRTG 2 cut(s) 839, 1041
SacI GAGCTC 1 cut(s) 484
SapI GCTCTTC 1 cut(s) 1592
SatI GCNGC 5 cut(s) 127, 669, 789, 1485, 1950
Sau96I GGNCC 7 cut(s) 947, 1340, 1432, 1459, 1576, 1914, 1998
ScaI AGTACT 1 cut(s) 723
SchI GAGTC 2 cut(s) 116, 1661
ScrFI CCNGG 4 cut(s) 1002, 1521, 1899, 1922
SduI GDGCHC 3 cut(s) 322, 484, 1587
SfaNI GCATC 9 cut(s) 4, 109, 138, 322, 498, 676, 1045, 1261, 1914
SfcI CTRYAG 1 cut(s) 982
Sfr274I CTCGAG 1 cut(s) 268
SinI GGWCC 5 cut(s) 947, 1340, 1432, 1576, 1914
SlaI CTCGAG 1 cut(s) 268
SmiI ATTTAAAT 1 cut(s) 534
SmiMI CAYNNNNRTG 2 cut(s) 839, 1041
SmlI CTYRAG 1 cut(s) 268
SmoI CTYRAG 1 cut(s) 268
SphI GCATGC 1 cut(s) 656
SseBI AGGCCT 1 cut(s) 808
SsiI CCGC 4 cut(s) 127, 511, 1504, 1949
SspI AATATT 1 cut(s) 1186
SspMI CTAG 6 cut(s) 290, 893, 1040, 1124, 1416, 1818
SstI GAGCTC 1 cut(s) 484
StuI AGGCCT 1 cut(s) 808
StyD4I CCNGG 4 cut(s) 1000, 1519, 1897, 1920
StyI CCWWGG 2 cut(s) 390, 2001
SwaI ATTTAAAT 1 cut(s) 534
TaaI ACNGT 1 cut(s) 643
TaiI ACGT 4 cut(s) 400, 1166, 1693, 1713
TaqI TCGA 7 cut(s) 51, 99, 269, 548, 797, 1528, 1590
TatI WGTACW 4 cut(s) 303, 721, 939, 1443
TauI GCSGC 2 cut(s) 129, 1952
TfiI GAWTC 3 cut(s) 713, 737, 1779
TscAI CASTG 4 cut(s) 183, 669, 790, 1653
TseFI GTSAC 1 cut(s) 592
TseI GCWGC 3 cut(s) 668, 788, 1484
Tsp45I GTSAC 1 cut(s) 592
TspDTI ATGAA 8 cut(s) 224, 300, 351, 600, 750, 823, 829, 1245
TspGWI ACGGA 1 cut(s) 100
TspRI CASTG 4 cut(s) 183, 669, 790, 1653
VneI GTGCAC 1 cut(s) 318
VpaK11BI GGWCC 5 cut(s) 947, 1340, 1432, 1576, 1914
VspI ATTAAT 1 cut(s) 1745
XapI RAATTY 3 cut(s) 556, 952, 1796
XceI RCATGY 5 cut(s) 593, 656, 770, 916, 1789
XhoI CTCGAG 1 cut(s) 268
XmnI GAANNNNTTC 1 cut(s) 768
XspI CTAG 6 cut(s) 290, 893, 1040, 1124, 1416, 1818
ZraI GACGTC 1 cut(s) 1691
ZrmI AGTACT 1 cut(s) 723
Zsp2I ATGCAT 2 cut(s) 29, 1276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.