F-box domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0396941 |
| rosa_laevigata | RLG00000014123 |
| rosa_roxburghii | Rroxscaffold_5G00341930 |
| rosa_rugosa | Rorug06G0022800 |
| rosa_samantha | Rh4AG111700 Rh4AG111800 Rh4BG072000 Rh4DG069400 Rh6BG144400 Rh6DG128800 |
| rosa_wichuraiana | Rw4G006060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 106 |
| AciI | CCGC | 1 cut(s) | 33 |
| AfaI | GTAC | 1 cut(s) | 236 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 57 |
| AflII | CTTAAG | 1 cut(s) | 170 |
| AgsI | TTSAA | 1 cut(s) | 157 |
| AjnI | CCWGG | 2 cut(s) | 68, 88 |
| AluBI | AGCT | 1 cut(s) | 23 |
| AluI | AGCT | 1 cut(s) | 23 |
| AoxI | GGCC | 1 cut(s) | 66 |
| ApeKI | GCWGC | 2 cut(s) | 23, 206 |
| BanI | GGYRCC | 1 cut(s) | 106 |
| BbvI | GCAGC | 2 cut(s) | 10, 193 |
| BciT130I | CCWGG | 2 cut(s) | 70, 90 |
| BfrI | CTTAAG | 1 cut(s) | 170 |
| BisI | GCNGC | 2 cut(s) | 24, 207 |
| BlsI | GCNGC | 2 cut(s) | 25, 208 |
| Bme1390I | CCNGG | 2 cut(s) | 70, 90 |
| BmiI | GGNNCC | 3 cut(s) | 108, 166, 192 |
| BmrFI | CCNGG | 2 cut(s) | 70, 90 |
| BpuEI | CTTGAG | 1 cut(s) | 37 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 250 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 57 |
| BseBI | CCWGG | 2 cut(s) | 70, 90 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 57 |
| BseXI | GCAGC | 2 cut(s) | 10, 193 |
| BseYI | CCCAGC | 1 cut(s) | 50 |
| BshFI | GGCC | 1 cut(s) | 68 |
| BshNI | GGYRCC | 1 cut(s) | 106 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 57 |
| BsnI | GGCC | 1 cut(s) | 68 |
| BspACI | CCGC | 1 cut(s) | 33 |
| BspANI | GGCC | 1 cut(s) | 68 |
| BspLI | GGNNCC | 3 cut(s) | 108, 166, 192 |
| BspT107I | GGYRCC | 1 cut(s) | 106 |
| BspTI | CTTAAG | 1 cut(s) | 170 |
| Bst2UI | CCWGG | 2 cut(s) | 70, 90 |
| Bst4CI | ACNGT | 1 cut(s) | 239 |
| BstAFI | CTTAAG | 1 cut(s) | 170 |
| BstNI | CCWGG | 2 cut(s) | 70, 90 |
| BstSCI | CCNGG | 2 cut(s) | 68, 88 |
| BstV1I | GCAGC | 2 cut(s) | 10, 193 |
| BsuRI | GGCC | 1 cut(s) | 68 |
| BtsIMutI | CAGTG | 1 cut(s) | 244 |
| Csp6I | GTAC | 1 cut(s) | 235 |
| CviJI | RGCY | 4 cut(s) | 23, 54, 68, 206 |
| CviKI_1 | RGCY | 4 cut(s) | 23, 54, 68, 206 |
| CviQI | GTAC | 1 cut(s) | 235 |
| Eco147I | AGGCCT | 1 cut(s) | 68 |
| EcoRII | CCWGG | 2 cut(s) | 68, 88 |
| FaiI | YATR | 8 cut(s) | 57, 137, 182, 216, 221, 254, 272, 274 |
| FauNDI | CATATG | 1 cut(s) | 272 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 207 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 207 |
| GluI | GCNGC | 2 cut(s) | 24, 207 |
| GsaI | CCCAGC | 1 cut(s) | 54 |
| HaeIII | GGCC | 1 cut(s) | 68 |
| HinfI | GANTC | 2 cut(s) | 4, 46 |
| Hpy188I | TCNGA | 1 cut(s) | 45 |
| Hpy188III | TCNNGA | 2 cut(s) | 8, 200 |
| HpyCH4III | ACNGT | 1 cut(s) | 239 |
| HpyCH4V | TGCA | 1 cut(s) | 26 |
| LpnPI | CCDG | 7 cut(s) | 55, 64, 75, 82, 102, 110, 123 |
| Lsp1109I | GCAGC | 2 cut(s) | 10, 193 |
| MluCI | AATT | 1 cut(s) | 151 |
| MnlI | CCTC | 3 cut(s) | 58, 97, 196 |
| MseI | TTAA | 1 cut(s) | 171 |
| MspCI | CTTAAG | 1 cut(s) | 170 |
| MspR9I | CCNGG | 2 cut(s) | 70, 90 |
| MvaI | CCWGG | 2 cut(s) | 70, 90 |
| NdeI | CATATG | 1 cut(s) | 272 |
| NlaIV | GGNNCC | 3 cut(s) | 108, 166, 192 |
| PceI | AGGCCT | 1 cut(s) | 68 |
| PfeI | GAWTC | 2 cut(s) | 4, 46 |
| PkrI | GCNGC | 2 cut(s) | 25, 208 |
| Psp6I | CCWGG | 2 cut(s) | 68, 88 |
| PspFI | CCCAGC | 1 cut(s) | 50 |
| PspGI | CCWGG | 2 cut(s) | 68, 88 |
| PspN4I | GGNNCC | 3 cut(s) | 108, 166, 192 |
| RsaI | GTAC | 1 cut(s) | 236 |
| RsaNI | GTAC | 1 cut(s) | 235 |
| SaqAI | TTAA | 1 cut(s) | 171 |
| SatI | GCNGC | 2 cut(s) | 24, 207 |
| ScrFI | CCNGG | 2 cut(s) | 70, 90 |
| SetI | ASST | 4 cut(s) | 25, 41, 62, 108 |
| SmlI | CTYRAG | 2 cut(s) | 16, 170 |
| SmoI | CTYRAG | 2 cut(s) | 16, 170 |
| Sse9I | AATT | 1 cut(s) | 151 |
| SseBI | AGGCCT | 1 cut(s) | 68 |
| SsiI | CCGC | 1 cut(s) | 33 |
| StuI | AGGCCT | 1 cut(s) | 68 |
| StyD4I | CCNGG | 2 cut(s) | 68, 88 |
| TaaI | ACNGT | 1 cut(s) | 239 |
| TasI | AATT | 1 cut(s) | 151 |
| TfiI | GAWTC | 2 cut(s) | 4, 46 |
| Tru1I | TTAA | 1 cut(s) | 171 |
| Tru9I | TTAA | 1 cut(s) | 171 |
| TscAI | CASTG | 1 cut(s) | 244 |
| TseI | GCWGC | 2 cut(s) | 23, 206 |
| TspDTI | ATGAA | 3 cut(s) | 17, 203, 241 |
| TspRI | CASTG | 1 cut(s) | 244 |
| Vha464I | CTTAAG | 1 cut(s) | 170 |