F-box domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0396941 |
| rosa_laevigata | RLG00000014123 |
| rosa_roxburghii | Rroxscaffold_5G00341930 |
| rosa_rugosa | Rorug06G0022800 |
| rosa_samantha | Rh4AG111700 Rh4AG111800 Rh4BG072000 Rh4DG069400 Rh6BG144400 Rh6DG128800 |
| rosa_wichuraiana | Rw4G006060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 395 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 216 |
| AflII | CTTAAG | 1 cut(s) | 329 |
| AgsI | TTSAA | 3 cut(s) | 22, 101, 316 |
| AjnI | CCWGG | 2 cut(s) | 227, 247 |
| AluBI | AGCT | 1 cut(s) | 182 |
| AluI | AGCT | 1 cut(s) | 182 |
| Alw26I | GTCTC | 1 cut(s) | 57 |
| Ama87I | CYCGRG | 1 cut(s) | 54 |
| AoxI | GGCC | 1 cut(s) | 58 |
| ApeKI | GCWGC | 2 cut(s) | 182, 365 |
| AspLEI | GCGC | 1 cut(s) | 86 |
| AvaI | CYCGRG | 1 cut(s) | 54 |
| BaeGI | GKGCMC | 1 cut(s) | 228 |
| BbvI | GCAGC | 2 cut(s) | 169, 352 |
| BciT130I | CCWGG | 2 cut(s) | 229, 249 |
| BcoDI | GTCTC | 1 cut(s) | 57 |
| BfrI | CTTAAG | 1 cut(s) | 329 |
| BisI | GCNGC | 2 cut(s) | 183, 366 |
| BlsI | GCNGC | 2 cut(s) | 184, 367 |
| Bme1390I | CCNGG | 2 cut(s) | 229, 249 |
| BmeT110I | CYCGRG | 1 cut(s) | 54 |
| BmiI | GGNNCC | 3 cut(s) | 267, 325, 351 |
| BmrFI | CCNGG | 2 cut(s) | 229, 249 |
| BpuEI | CTTGAG | 1 cut(s) | 196 |
| BsaJI | CCNNGG | 3 cut(s) | 140, 227, 228 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 409 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 216 |
| BseBI | CCWGG | 2 cut(s) | 229, 249 |
| BseDI | CCNNGG | 3 cut(s) | 140, 227, 228 |
| BseGI | GGATG | 1 cut(s) | 130 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 216 |
| BseRI | GAGGAG | 1 cut(s) | 278 |
| BseSI | GKGCMC | 1 cut(s) | 228 |
| BseXI | GCAGC | 2 cut(s) | 169, 352 |
| BseYI | CCCAGC | 1 cut(s) | 209 |
| BshFI | GGCC | 1 cut(s) | 60 |
| BsiHKCI | CYCGRG | 1 cut(s) | 54 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 216 |
| BsmAI | GTCTC | 1 cut(s) | 57 |
| BsnI | GGCC | 1 cut(s) | 60 |
| BsoBI | CYCGRG | 1 cut(s) | 54 |
| Bsp1286I | GDGCHC | 1 cut(s) | 228 |
| BspANI | GGCC | 1 cut(s) | 60 |
| BspLI | GGNNCC | 3 cut(s) | 267, 325, 351 |
| BspTI | CTTAAG | 1 cut(s) | 329 |
| BssECI | CCNNGG | 3 cut(s) | 140, 227, 228 |
| Bst2UI | CCWGG | 2 cut(s) | 229, 249 |
| Bst4CI | ACNGT | 1 cut(s) | 398 |
| Bst6I | CTCTTC | 1 cut(s) | 96 |
| BstAFI | CTTAAG | 1 cut(s) | 329 |
| BstDSI | CCRYGG | 1 cut(s) | 140 |
| BstF5I | GGATG | 1 cut(s) | 130 |
| BstHHI | GCGC | 1 cut(s) | 86 |
| BstMAI | GTCTC | 1 cut(s) | 57 |
| BstNI | CCWGG | 2 cut(s) | 229, 249 |
| BstSCI | CCNGG | 2 cut(s) | 227, 247 |
| BstSLI | GKGCMC | 1 cut(s) | 228 |
| BstV1I | GCAGC | 2 cut(s) | 169, 352 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 44 |
| BsuRI | GGCC | 1 cut(s) | 60 |
| BtgI | CCRYGG | 1 cut(s) | 140 |
| BtsCI | GGATG | 1 cut(s) | 130 |
| BtsIMutI | CAGTG | 1 cut(s) | 403 |
| CfoI | GCGC | 1 cut(s) | 86 |
| Csp6I | GTAC | 1 cut(s) | 394 |
| CviJI | RGCY | 5 cut(s) | 60, 182, 213, 268, 365 |
| CviKI_1 | RGCY | 5 cut(s) | 60, 182, 213, 268, 365 |
| CviQI | GTAC | 1 cut(s) | 394 |
| DraI | TTTAAA | 1 cut(s) | 381 |
| Eam1104I | CTCTTC | 1 cut(s) | 96 |
| EarI | CTCTTC | 1 cut(s) | 96 |
| Eco32I | GATATC | 1 cut(s) | 200 |
| Eco88I | CYCGRG | 1 cut(s) | 54 |
| EcoRII | CCWGG | 2 cut(s) | 227, 247 |
| EcoRV | GATATC | 1 cut(s) | 200 |
| FauNDI | CATATG | 1 cut(s) | 159 |
| Fnu4HI | GCNGC | 2 cut(s) | 183, 366 |
| FokI | GGATG | 1 cut(s) | 137 |
| Fsp4HI | GCNGC | 2 cut(s) | 183, 366 |
| GlaI | GCGC | 1 cut(s) | 85 |
| GluI | GCNGC | 2 cut(s) | 183, 366 |
| GsaI | CCCAGC | 1 cut(s) | 213 |
| HaeIII | GGCC | 1 cut(s) | 60 |
| HhaI | GCGC | 1 cut(s) | 86 |
| Hin6I | GCGC | 1 cut(s) | 84 |
| HinP1I | GCGC | 1 cut(s) | 84 |
| HinfI | GANTC | 3 cut(s) | 50, 163, 205 |
| Hpy188I | TCNGA | 1 cut(s) | 204 |
| Hpy188III | TCNNGA | 3 cut(s) | 54, 167, 359 |
| HpyCH4III | ACNGT | 1 cut(s) | 398 |
| HpyCH4V | TGCA | 3 cut(s) | 185, 192, 254 |
| HspAI | GCGC | 1 cut(s) | 84 |
| LmnI | GCTCC | 1 cut(s) | 265 |
| LpnPI | CCDG | 9 cut(s) | 94, 100, 214, 223, 234, 241, 261, 269, 282 |
| Lsp1109I | GCAGC | 2 cut(s) | 169, 352 |
| MboII | GAAGA | 2 cut(s) | 113, 140 |
| MhlI | GDGCHC | 1 cut(s) | 228 |
| MluCI | AATT | 1 cut(s) | 376 |
| MlyI | GAGTC | 1 cut(s) | 59 |
| MmeI | TCCRAC | 1 cut(s) | 102 |
| MnlI | CCTC | 5 cut(s) | 21, 50, 103, 256, 355 |
| MseI | TTAA | 3 cut(s) | 89, 330, 380 |
| MspCI | CTTAAG | 1 cut(s) | 329 |
| MspR9I | CCNGG | 2 cut(s) | 229, 249 |
| MvaI | CCWGG | 2 cut(s) | 229, 249 |
| NdeI | CATATG | 1 cut(s) | 159 |
| NlaIV | GGNNCC | 3 cut(s) | 267, 325, 351 |
| PaeR7I | CTCGAG | 1 cut(s) | 54 |
| PasI | CCCWGGG | 1 cut(s) | 228 |
| PfeI | GAWTC | 2 cut(s) | 163, 205 |
| PkrI | GCNGC | 2 cut(s) | 184, 367 |
| PleI | GAGTC | 1 cut(s) | 58 |
| PpsI | GAGTC | 1 cut(s) | 58 |
| Psp6I | CCWGG | 2 cut(s) | 227, 247 |
| PspFI | CCCAGC | 1 cut(s) | 209 |
| PspGI | CCWGG | 2 cut(s) | 227, 247 |
| PspN4I | GGNNCC | 3 cut(s) | 267, 325, 351 |
| RsaI | GTAC | 1 cut(s) | 395 |
| RsaNI | GTAC | 1 cut(s) | 394 |
| SaqAI | TTAA | 3 cut(s) | 89, 330, 380 |
| SatI | GCNGC | 2 cut(s) | 183, 366 |
| SchI | GAGTC | 1 cut(s) | 59 |
| ScrFI | CCNGG | 2 cut(s) | 229, 249 |
| SduI | GDGCHC | 1 cut(s) | 228 |
| SetI | ASST | 3 cut(s) | 95, 184, 221 |
| Sfr274I | CTCGAG | 1 cut(s) | 54 |
| SlaI | CTCGAG | 1 cut(s) | 54 |
| SmlI | CTYRAG | 3 cut(s) | 54, 175, 329 |
| SmoI | CTYRAG | 3 cut(s) | 54, 175, 329 |
| Sse9I | AATT | 1 cut(s) | 376 |
| StyD4I | CCNGG | 2 cut(s) | 227, 247 |
| TaaI | ACNGT | 1 cut(s) | 398 |
| TaqI | TCGA | 1 cut(s) | 55 |
| TasI | AATT | 1 cut(s) | 376 |
| TfiI | GAWTC | 2 cut(s) | 163, 205 |
| Tru1I | TTAA | 3 cut(s) | 89, 330, 380 |
| Tru9I | TTAA | 3 cut(s) | 89, 330, 380 |
| TscAI | CASTG | 1 cut(s) | 403 |
| TseI | GCWGC | 2 cut(s) | 182, 365 |
| TspDTI | ATGAA | 4 cut(s) | 141, 176, 362, 400 |
| TspGWI | ACGGA | 1 cut(s) | 129 |
| TspRI | CASTG | 1 cut(s) | 403 |
| Vha464I | CTTAAG | 1 cut(s) | 329 |
| XhoI | CTCGAG | 1 cut(s) | 54 |