RchiOBHm_Chr4g0406421

Electron transfer flavoprotein-ubiquinone oxidoreductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0005790
Physical Location & Seq
Reverse (-)
28107924 .. 28128048
20125 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1881 bp
ATGTCGATCATGCTGAGGCATATTCTGAAACGAAACTCGAATTCGTACATTGGGCGGCTGGCTTCTGCTTCCGCGTCTGGACGGCTATTCTCGTGGAGGAGCAGGACTTTCTGCAGTGAACCGCAGAGAGAGTCTATTCAATACGACGTCGTGATAGTTGGGGCGGGGCCGGCTGGTTTATCGGCGGCGATTAGGTTCAAACAATTGTGCCGTGAAAATGATACTGATTTATCAGTCTGCGTTGTGGAGAAAGGAGCTGAAGTCGGTGCTCACATTATTTCTGGTAATGTCTTTGAACCCCGGGCTCTGGATGAACTTATCCCACAATGGAGACAGGAAGAGTCACCCATCACCGTCCCTGTTTCTTCTGACAAGTTTTTGTTACTTACAAAGAATCATGCATTTTCGCTGCCTTGTCCTTTTAATAACAGAGGAAACTATGTCATAAGTTTAAGTCAGTTAGTACGATGGATGGGAGTGAAGGCAGAAGAATTGGGAGTAGAAATATATCCAGGCTTTGCTGCTAGTGAGATATTATATGATTCAAATGACACTGTTGTTGGCATTCGAACTAATGATATGGGAATATCCAAAGATGGTTCAAAGAAGGAAAATTTTCAACCTGGCATAGAATTGAAAGGCAAATCTCTCGCTCTCTCCCGCTCTCTTCTCCACGCACACACAGTCTCACACAGAATTATGCTCATGCACATGCTTATATGTACAGCAAATATTTATGTTGTAAAAGTCCCTGCTTTGAGCATGCGTGGCTCTTGGCGGGTCACACTTCTAGCTGAAGGGTGTCGAGGATCATTGTCAGAGAAAATAATGGATAAATACAACTTGAGAGAGAAGGGGCATGCTCAGCATCAGACTTATGCTTTGGGAATCAAAGAGGTTTGGGAAATTGATGAGAGAAAACACAAACCAGGTGCTGTGATTCACACGCTTGGTTGGCCCTTGGATCAGAAGACATATGGAGGTTCATTTCTGTACCACATGAAAGATAGACAGATTTCTATTGGCTTTGTGGTTGCTTTGAATTATCAAAACCCTTTCTTAAGTCCATATGAAGAATTCCAGAAATTTAAGCATCATCCTGCAATCAAGCCACTGCTAGAGGGTGGGACTGTTCTTCAATATGGCGCTCGCACCTTGAATGAAGGTGGCTTTCAGTCTATCCCATATCCAGCTTTCCCTGGAGGAGCAGTTATTGGATGCTCTGCTGGCTTTTTAAATGTACCAAAAATTAAGGGAACACATACTGCAATGAAATCAGGCATGCTAGCTGCGGAAGCATCGTTTGGTGTTCTTCATAAAGGCTCAAGTATGGAAAAATACTGGGATGCTTTAAGGAATTCGTGGATATGGGAAGAATTATATAGAGCACGGAACTTCCGACCGGCATTTGAGTATGGACTTATTCCTGGCTTGGCCATAAGTGCGTTAGAACACTACATAATGAAAGGGAGAGCTGCCTTAACGCTGAAGCATGGAAAACCTGATAATGAAACAACAAATGTTGCAGAGTTCCACTGTCCAATTAAATATCCAAAGCCAGATGGGGTTTTATCTTTTGATATTCCAACCTCCCTACACAGGAGCAATACAAATCATGAGCATGACCAACCAGCTCACCTTCGGTTGAAGGACCCGAAGAAGCCTGAACTTGTCAACTTGCCAGTGTATGCTGGTCCTGAGTCACGATATTGTCCTGCACGTGTTTACGAGTATAACCCTGATGAAACGGGTCAGCTGAAGTTGCAGATCAACGCTCAGAATTGCTTACATTGCAAGGCTTGCGATATCAAAGACCCTAAGCAAAACATAGAGTGGACTGCACCAGAAGGAGGTGGTGGTCCAGGCTATTCAATAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0003674 GO:0003824 GO:0004174 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005759 GO:0006082 GO:0006091 GO:0006520 GO:0006551 GO:0006552 GO:0006629 GO:0006631 GO:0006635 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009055 GO:0009056 GO:0009062 GO:0009063 GO:0009081 GO:0009083 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009987 GO:0015980 GO:0016020 GO:0016021 GO:0016042 GO:0016054 GO:0016491 GO:0016645 GO:0016649 GO:0016722 GO:0017133 GO:0019395 GO:0019752 GO:0019866 GO:0022900 GO:0022904 GO:0030258 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031304 GO:0031305 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0032592 GO:0032787 GO:0032991 GO:0033539 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043783 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045251 GO:0045333 GO:0046395 GO:0048037 GO:0048038 GO:0048039 GO:0050660 GO:0050662 GO:0050896 GO:0051536 GO:0051539 GO:0051540 GO:0055114 GO:0070013 GO:0071704 GO:0072329 GO:0097159 GO:0098573 GO:0098798 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1902494 GO:1990204
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ETF_QO FAD_binding_2 NAD_binding_8

Protein Analysis

626

Amino Acids

69.8

Weight (kDa)

8.84

Isoelectric Point (pI)

37.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ETFQO_UQ-bd PF21162 293 - 386 1.1e-43 ETF-QO, ubiquinone-binding
Fer4_ETF_QO PF05187 522 - 624 3.5e-45 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 150
AccBSI CCGCTC 1 cut(s) 663
AccII CGCG 1 cut(s) 74
AciI CCGC 8 cut(s) 55, 72, 122, 164, 185, 661, 778, 1292
AclWI GGATC 2 cut(s) 817, 972
AcoI YGGCCR 1 cut(s) 1434
AcsI RAATTY 5 cut(s) 40, 613, 1076, 1085, 1357
AcuI CTGAAG 4 cut(s) 279, 816, 1508, 1778
AcvI CACGTG 1 cut(s) 1721
AcyI GRCGYC 1 cut(s) 147
AfaI GTAC 5 cut(s) 47, 465, 724, 995, 1242
AfiI CCNNNNNNNGG 3 cut(s) 307, 1599, 1850
AflII CTTAAG 1 cut(s) 1060
AflIII ACRYGT 1 cut(s) 1720
AjnI CCWGG 6 cut(s) 511, 622, 928, 1198, 1426, 1861
AjuI GAANNNNNNNTTGG 2 cut(s) 1287, 1319
AluBI AGCT 7 cut(s) 257, 794, 1193, 1289, 1475, 1634, 1756
AluI AGCT 7 cut(s) 257, 794, 1193, 1289, 1475, 1634, 1756
Alw21I GWGCWC 2 cut(s) 271, 1390
Alw26I GTCTC 2 cut(s) 325, 691
AlwI GGATC 2 cut(s) 817, 972
AlwNI CAGNNNCTG 1 cut(s) 935
Ama87I CYCGRG 1 cut(s) 300
AoxI GGCC 3 cut(s) 167, 956, 1434
ApeKI GCWGC 4 cut(s) 409, 521, 1289, 1475
ApoI RAATTY 5 cut(s) 40, 613, 1076, 1085, 1357
ArsI GACNNNNNNTTYG 2 cut(s) 865, 897
Asp700I GAANNNNTTC 1 cut(s) 615
AspLEI GCGC 1 cut(s) 1148
AspS9I GGNCC 5 cut(s) 167, 957, 1651, 1694, 1859
AsuC2I CCSGG 2 cut(s) 301, 302
AsuHPI GGTGA 3 cut(s) 336, 343, 1628
AsuII TTCGAA 1 cut(s) 568
AsuNHI GCTAGC 1 cut(s) 1285
AvaI CYCGRG 1 cut(s) 300
AvaII GGWCC 3 cut(s) 1651, 1694, 1859
BalI TGGCCA 1 cut(s) 1436
BanII GRGCYC 1 cut(s) 307
BauI CACGAG 1 cut(s) 91
BbrPI CACGTG 1 cut(s) 1721
BbsI GAAGAC 1 cut(s) 977
Bbv12I GWGCWC 2 cut(s) 271, 1390
BbvCI CCTCAGC 1 cut(s) 14
BbvI GCAGC 4 cut(s) 396, 508, 1276, 1462
BccI CCATC 5 cut(s) 356, 462, 466, 590, 1556
BceAI ACGGC 2 cut(s) 98, 195
BcgI CGANNNNNNTGC 2 cut(s) 631, 665
BciT130I CCWGG 6 cut(s) 513, 624, 930, 1200, 1428, 1863
BcnI CCSGG 2 cut(s) 301, 302
BcoDI GTCTC 2 cut(s) 325, 691
BfaI CTAG 4 cut(s) 525, 791, 1118, 1286
BfmI CTRYAG 1 cut(s) 112
BfoI RGCGCY 1 cut(s) 1149
BfrI CTTAAG 1 cut(s) 1060
BisI GCNGC 6 cut(s) 56, 186, 410, 522, 1290, 1476
BlpI GCTNAGC 1 cut(s) 864
BlsI GCNGC 6 cut(s) 57, 187, 411, 523, 1291, 1477
Bme1390I CCNGG 8 cut(s) 301, 302, 513, 624, 930, 1200, 1428, 1863
Bme18I GGWCC 3 cut(s) 1651, 1694, 1859
BmeT110I CYCGRG 1 cut(s) 300
BmgT120I GGNCC 5 cut(s) 167, 957, 1651, 1694, 1859
BmiI GGNNCC 2 cut(s) 168, 1653
BmrFI CCNGG 8 cut(s) 301, 302, 513, 624, 930, 1200, 1428, 1863
BmrI ACTGGG 1 cut(s) 1351
BmsI GCATC 5 cut(s) 877, 1102, 1208, 1307, 1336
BmtI GCTAGC 1 cut(s) 1289
BmuI ACTGGG 1 cut(s) 1351
BpiI GAAGAC 1 cut(s) 977
BpmI CTGGAG 1 cut(s) 1221
Bpu10I CCTNAGC 2 cut(s) 14, 1818
Bpu1102I GCTNAGC 1 cut(s) 864
Bpu14I TTCGAA 1 cut(s) 568
BpuEI CTTGAG 2 cut(s) 865, 1309
BpuMI CCSGG 2 cut(s) 301, 302
BsaAI YACGTR 1 cut(s) 1721
BsaHI GRCGYC 1 cut(s) 147
BsaJI CCNNGG 4 cut(s) 299, 300, 960, 1198
BsaXI ACNNNNNCTCC 4 cut(s) 246, 276, 1194, 1224
Bsc4I CCNNNNNNNGG 3 cut(s) 307, 1599, 1850
Bse118I RCCGGY 2 cut(s) 169, 1402
Bse1I ACTGG 2 cut(s) 1346, 1682
Bse3DI GCAATG 2 cut(s) 1275, 1789
BseBI CCWGG 6 cut(s) 513, 624, 930, 1200, 1428, 1863
BseDI CCNNGG 4 cut(s) 299, 300, 960, 1198
BseGI GGATG 5 cut(s) 316, 477, 1096, 1223, 1351
BseLI CCNNNNNNNGG 3 cut(s) 307, 1599, 1850
BseMI GCAATG 2 cut(s) 1275, 1789
BseMII CTCAG 4 cut(s) 5, 878, 1689, 1790
BseNI ACTGG 2 cut(s) 1346, 1682
BseRI GAGGAG 2 cut(s) 112, 1218
BseXI GCAGC 4 cut(s) 396, 508, 1276, 1462
BsgI GTGCAG 2 cut(s) 1701, 1824
Bsh1236I CGCG 1 cut(s) 74
Bsh1285I CGRYCG 1 cut(s) 1403
BshFI GGCC 3 cut(s) 169, 958, 1436
BsiEI CGRYCG 1 cut(s) 1403
BsiHKAI GWGCWC 2 cut(s) 271, 1390
BsiHKCI CYCGRG 1 cut(s) 300
BsiSI CCGG 3 cut(s) 170, 301, 1403
BslFI GGGAC 3 cut(s) 341, 734, 1141
BslI CCNNNNNNNGG 3 cut(s) 307, 1599, 1850
BsmAI GTCTC 2 cut(s) 325, 691
BsmFI GGGAC 3 cut(s) 341, 734, 1141
BsmI GAATGC 1 cut(s) 564
BsnI GGCC 3 cut(s) 169, 958, 1436
BsoBI CYCGRG 1 cut(s) 300
Bsp119I TTCGAA 1 cut(s) 568
Bsp1286I GDGCHC 3 cut(s) 271, 307, 1390
Bsp1407I TGTACA 1 cut(s) 722
Bsp143I GATC 4 cut(s) 6, 809, 964, 1767
Bsp1720I GCTNAGC 1 cut(s) 864
BspACI CCGC 8 cut(s) 55, 72, 122, 164, 185, 661, 778, 1292
BspANI GGCC 3 cut(s) 169, 958, 1436
BspCNI CTCAG 4 cut(s) 6, 877, 1690, 1789
BspFNI CGCG 1 cut(s) 74
BspHI TCATGA 1 cut(s) 1615
BspLI GGNNCC 2 cut(s) 168, 1653
BspMAI CTGCAG 1 cut(s) 116
BspOI GCTAGC 1 cut(s) 1289
BspPI GGATC 2 cut(s) 817, 972
BspT104I TTCGAA 1 cut(s) 568
BspTI CTTAAG 1 cut(s) 1060
BsrBI CCGCTC 1 cut(s) 663
BsrDI GCAATG 2 cut(s) 1275, 1789
BsrFI RCCGGY 2 cut(s) 169, 1402
BsrGI TGTACA 1 cut(s) 722
BsrI ACTGG 2 cut(s) 1346, 1682
BssAI RCCGGY 2 cut(s) 169, 1402
BssECI CCNNGG 4 cut(s) 299, 300, 960, 1198
BssMI GATC 4 cut(s) 6, 809, 964, 1767
BssNI GRCGYC 1 cut(s) 147
BssSI CACGAG 1 cut(s) 91
BssT1I CCWWGG 1 cut(s) 960
Bst2BI CACGAG 1 cut(s) 91
Bst2UI CCWGG 6 cut(s) 513, 624, 930, 1200, 1428, 1863
Bst4CI ACNGT 5 cut(s) 355, 556, 685, 1132, 1538
Bst6I CTCTTC 2 cut(s) 333, 672
BstACI GRCGYC 1 cut(s) 147
BstAFI CTTAAG 1 cut(s) 1060
BstAPI GCANNNNNTGC 1 cut(s) 1800
BstAUI TGTACA 1 cut(s) 722
BstBAI YACGTR 1 cut(s) 1721
BstBI TTCGAA 1 cut(s) 568
BstC8I GCNNGC 9 cut(s) 60, 171, 764, 861, 1150, 1228, 1283, 1287, 1801
BstDEI CTNAG 5 cut(s) 14, 864, 1698, 1776, 1818
BstF5I GGATG 5 cut(s) 316, 477, 1096, 1223, 1351
BstFNI CGCG 1 cut(s) 74
BstH2I RGCGCY 1 cut(s) 1149
BstHHI GCGC 1 cut(s) 1148
BstKTI GATC 4 cut(s) 9, 812, 967, 1770
BstMAI GTCTC 2 cut(s) 325, 691
BstMBI GATC 4 cut(s) 6, 809, 964, 1767
BstMCI CGRYCG 1 cut(s) 1403
BstNI CCWGG 6 cut(s) 513, 624, 930, 1200, 1428, 1863
BstNSI RCATGY 4 cut(s) 715, 766, 863, 1285
BstSCI CCNGG 8 cut(s) 299, 300, 511, 622, 928, 1198, 1426, 1861
BstSFI CTRYAG 1 cut(s) 112
BstUI CGCG 1 cut(s) 74
BstV1I GCAGC 4 cut(s) 396, 508, 1276, 1462
BstV2I GAAGAC 1 cut(s) 977
BsuRI GGCC 3 cut(s) 169, 958, 1436
BtsCI GGATG 5 cut(s) 316, 477, 1096, 1223, 1351
BtsI GCAGTG 2 cut(s) 121, 1112
BtsIMutI CAGTG 5 cut(s) 121, 552, 1112, 1534, 1689
Cac8I GCNNGC 9 cut(s) 60, 171, 764, 861, 1150, 1228, 1283, 1287, 1801
CaiI CAGNNNCTG 1 cut(s) 935
CciI TCATGA 1 cut(s) 1615
CfoI GCGC 1 cut(s) 1148
Cfr10I RCCGGY 2 cut(s) 169, 1402
Cfr13I GGNCC 5 cut(s) 167, 957, 1651, 1694, 1859
Cfr9I CCCGGG 1 cut(s) 300
CseI GACGC 1 cut(s) 63
CsiI ACCWGGT 1 cut(s) 928
Csp6I GTAC 5 cut(s) 46, 464, 723, 994, 1241
CviQI GTAC 5 cut(s) 46, 464, 723, 994, 1241
DdeI CTNAG 5 cut(s) 14, 864, 1698, 1776, 1818
DpnI GATC 4 cut(s) 8, 811, 966, 1769
DpnII GATC 4 cut(s) 6, 809, 964, 1767
DraI TTTAAA 1 cut(s) 1236
EaeI YGGCCR 1 cut(s) 1434
Eam1104I CTCTTC 2 cut(s) 333, 672
EarI CTCTTC 2 cut(s) 333, 672
Eco130I CCWWGG 1 cut(s) 960
Eco24I GRGCYC 1 cut(s) 307
Eco32I GATATC 1 cut(s) 1807
Eco47I GGWCC 3 cut(s) 1651, 1694, 1859
Eco57I CTGAAG 4 cut(s) 279, 816, 1508, 1778
Eco72I CACGTG 1 cut(s) 1721
Eco88I CYCGRG 1 cut(s) 300
EcoO109I RGGNCCY 1 cut(s) 1651
EcoRI GAATTC 3 cut(s) 40, 1076, 1357
EcoRII CCWGG 6 cut(s) 511, 622, 928, 1198, 1426, 1861
EcoRV GATATC 1 cut(s) 1807
EcoT14I CCWWGG 1 cut(s) 960
EcoT22I ATGCAT 1 cut(s) 403
EcoT38I GRGCYC 1 cut(s) 307
ErhI CCWWGG 1 cut(s) 960
FaqI GGGAC 3 cut(s) 341, 734, 1141
FauI CCCGC 3 cut(s) 157, 668, 771
FauNDI CATATG 2 cut(s) 976, 1069
Fnu4HI GCNGC 6 cut(s) 56, 186, 410, 522, 1290, 1476
FokI GGATG 5 cut(s) 323, 484, 1083, 1230, 1358
FriOI GRGCYC 1 cut(s) 307
Fsp4HI GCNGC 6 cut(s) 56, 186, 410, 522, 1290, 1476
FspBI CTAG 4 cut(s) 525, 791, 1118, 1286
GlaI GCGC 1 cut(s) 1147
GluI GCNGC 6 cut(s) 56, 186, 410, 522, 1290, 1476
GsuI CTGGAG 1 cut(s) 1221
HaeII RGCGCY 1 cut(s) 1149
HaeIII GGCC 3 cut(s) 169, 958, 1436
HapII CCGG 3 cut(s) 170, 301, 1403
HgaI GACGC 1 cut(s) 63
HhaI GCGC 1 cut(s) 1148
Hin1I GRCGYC 1 cut(s) 147
Hin6I GCGC 1 cut(s) 1146
HinP1I GCGC 1 cut(s) 1146
HincII GTYRAC 1 cut(s) 1675
HindII GTYRAC 1 cut(s) 1675
HinfI GANTC 7 cut(s) 131, 341, 394, 542, 888, 940, 1700
HpaII CCGG 3 cut(s) 170, 301, 1403
HphI GGTGA 3 cut(s) 336, 343, 1628
Hpy166II GTNNAC 4 cut(s) 119, 1675, 1726, 1836
Hpy188I TCNGA 7 cut(s) 27, 370, 820, 873, 969, 1400, 1779
Hpy188III TCNNGA 7 cut(s) 78, 151, 308, 1081, 1616, 1697, 1704
Hpy8I GTNNAC 4 cut(s) 119, 1675, 1726, 1836
Hpy99I CGWCG 2 cut(s) 149, 152
HpyAV CCTTC 8 cut(s) 475, 601, 791, 847, 1157, 1642, 1649, 1841
HpyCH4III ACNGT 5 cut(s) 355, 556, 685, 1132, 1538
HpyCH4IV ACGT 2 cut(s) 147, 1720
HpyF3I CTNAG 5 cut(s) 14, 864, 1698, 1776, 1818
HpySE526I ACGT 2 cut(s) 147, 1720
Hsp92I GRCGYC 1 cut(s) 147
HspAI GCGC 1 cut(s) 1146
KroI GCCGGC 1 cut(s) 169
KroNI GCCGGC 1 cut(s) 171
Kzo9I GATC 4 cut(s) 6, 809, 964, 1767
LmnI GCTCC 4 cut(s) 99, 254, 1205, 1602
Lsp1109I GCAGC 4 cut(s) 396, 508, 1276, 1462
LweI GCATC 5 cut(s) 877, 1102, 1208, 1307, 1336
MabI ACCWGGT 1 cut(s) 928
MaeI CTAG 4 cut(s) 525, 791, 1118, 1286
MaeII ACGT 2 cut(s) 147, 1720
MaeIII GTNAC 4 cut(s) 342, 381, 781, 1701
MalI GATC 4 cut(s) 8, 811, 966, 1769
MbiI CCGCTC 1 cut(s) 663
MboI GATC 4 cut(s) 6, 809, 964, 1767
MfeI CAATTG 1 cut(s) 203
MhlI GDGCHC 3 cut(s) 271, 307, 1390
MlsI TGGCCA 1 cut(s) 1436
MluNI TGGCCA 1 cut(s) 1436
MlyI GAGTC 3 cut(s) 140, 350, 1709
MmeI TCCRAC 2 cut(s) 1423, 1610
Mox20I TGGCCA 1 cut(s) 1436
Mph1103I ATGCAT 1 cut(s) 403
MroNI GCCGGC 1 cut(s) 169
MroXI GAANNNNTTC 1 cut(s) 615
MscI TGGCCA 1 cut(s) 1436
MseI TTAA 9 cut(s) 423, 452, 1061, 1089, 1235, 1251, 1352, 1481, 1545
MslI CAYNNNNRTG 2 cut(s) 710, 1620
Msp20I TGGCCA 1 cut(s) 1436
MspA1I CMGCKG 1 cut(s) 1756
MspCI CTTAAG 1 cut(s) 1060
MspI CCGG 3 cut(s) 170, 301, 1403
MspR9I CCNGG 8 cut(s) 301, 302, 513, 624, 930, 1200, 1428, 1863
MunI CAATTG 1 cut(s) 203
Mva1269I GAATGC 1 cut(s) 564
MvaI CCWGG 6 cut(s) 513, 624, 930, 1200, 1428, 1863
MvnI CGCG 1 cut(s) 74
NaeI GCCGGC 1 cut(s) 171
NciI CCSGG 2 cut(s) 301, 302
NdeI CATATG 2 cut(s) 976, 1069
NdeII GATC 4 cut(s) 6, 809, 964, 1767
NgoMIV GCCGGC 1 cut(s) 169
NheI GCTAGC 1 cut(s) 1285
NlaIV GGNNCC 2 cut(s) 168, 1653
NmuCI GTSAC 3 cut(s) 342, 781, 1701
NsiI ATGCAT 1 cut(s) 403
NspI RCATGY 4 cut(s) 715, 766, 863, 1285
NspV TTCGAA 1 cut(s) 568
PaeI GCATGC 3 cut(s) 766, 863, 1285
PagI TCATGA 1 cut(s) 1615
PcsI WCGNNNNNNNCGW 1 cut(s) 1396
PctI GAATGC 1 cut(s) 564
PdiI GCCGGC 1 cut(s) 171
PdmI GAANNNNTTC 1 cut(s) 615
PfeI GAWTC 4 cut(s) 394, 542, 888, 940
PkrI GCNGC 6 cut(s) 57, 187, 411, 523, 1291, 1477
PleI GAGTC 3 cut(s) 139, 349, 1708
PmaCI CACGTG 1 cut(s) 1721
PmlI CACGTG 1 cut(s) 1721
PpsI GAGTC 3 cut(s) 139, 349, 1708
Ppu21I YACGTR 1 cut(s) 1721
PpuMI RGGWCCY 1 cut(s) 1651
Psp5II RGGWCCY 1 cut(s) 1651
Psp6I CCWGG 6 cut(s) 511, 622, 928, 1198, 1426, 1861
PspCI CACGTG 1 cut(s) 1721
PspGI CCWGG 6 cut(s) 511, 622, 928, 1198, 1426, 1861
PspN4I GGNNCC 2 cut(s) 168, 1653
PspPI GGNCC 5 cut(s) 167, 957, 1651, 1694, 1859
PspPPI RGGWCCY 1 cut(s) 1651
PstI CTGCAG 1 cut(s) 116
PstNI CAGNNNCTG 1 cut(s) 935
PvuII CAGCTG 1 cut(s) 1756
RsaI GTAC 5 cut(s) 47, 465, 724, 995, 1242
RsaNI GTAC 5 cut(s) 46, 464, 723, 994, 1241
RseI CAYNNNNRTG 2 cut(s) 710, 1620
SaqAI TTAA 9 cut(s) 423, 452, 1061, 1089, 1235, 1251, 1352, 1481, 1545
SatI GCNGC 6 cut(s) 56, 186, 410, 522, 1290, 1476
Sau3AI GATC 4 cut(s) 6, 809, 964, 1767
Sau96I GGNCC 5 cut(s) 167, 957, 1651, 1694, 1859
SchI GAGTC 3 cut(s) 140, 350, 1709
ScrFI CCNGG 8 cut(s) 301, 302, 513, 624, 930, 1200, 1428, 1863
SduI GDGCHC 3 cut(s) 271, 307, 1390
SexAI ACCWGGT 1 cut(s) 928
SfaNI GCATC 5 cut(s) 877, 1102, 1208, 1307, 1336
SfcI CTRYAG 1 cut(s) 112
SfuI TTCGAA 1 cut(s) 568
SinI GGWCC 3 cut(s) 1651, 1694, 1859
SmaI CCCGGG 1 cut(s) 302
SmiMI CAYNNNNRTG 2 cut(s) 710, 1620
SmlI CTYRAG 3 cut(s) 844, 1060, 1324
SmoI CTYRAG 3 cut(s) 844, 1060, 1324
SphI GCATGC 3 cut(s) 766, 863, 1285
SsiI CCGC 8 cut(s) 55, 72, 122, 164, 185, 661, 778, 1292
SspI AATATT 1 cut(s) 733
SspMI CTAG 4 cut(s) 525, 791, 1118, 1286
StyD4I CCNGG 8 cut(s) 299, 300, 511, 622, 928, 1198, 1426, 1861
StyI CCWWGG 1 cut(s) 960
TaaI ACNGT 5 cut(s) 355, 556, 685, 1132, 1538
TaiI ACGT 2 cut(s) 150, 1723
TaqI TCGA 4 cut(s) 5, 38, 568, 805
TatI WGTACW 1 cut(s) 722
TauI GCSGC 2 cut(s) 58, 188
TfiI GAWTC 4 cut(s) 394, 542, 888, 940
Tru1I TTAA 9 cut(s) 423, 452, 1061, 1089, 1235, 1251, 1352, 1481, 1545
Tru9I TTAA 9 cut(s) 423, 452, 1061, 1089, 1235, 1251, 1352, 1481, 1545
TscAI CASTG 5 cut(s) 121, 559, 1119, 1541, 1689
TseFI GTSAC 3 cut(s) 342, 781, 1701
TseI GCWGC 4 cut(s) 409, 521, 1289, 1475
Tsp45I GTSAC 3 cut(s) 342, 781, 1701
TspGWI ACGGA 1 cut(s) 1405
TspMI CCCGGG 1 cut(s) 300
TspRI CASTG 5 cut(s) 121, 559, 1119, 1541, 1689
Vha464I CTTAAG 1 cut(s) 1060
VpaK11BI GGWCC 3 cut(s) 1651, 1694, 1859
XapI RAATTY 5 cut(s) 40, 613, 1076, 1085, 1357
XceI RCATGY 4 cut(s) 715, 766, 863, 1285
XmaI CCCGGG 1 cut(s) 300
XmnI GAANNNNTTC 1 cut(s) 615
XspI CTAG 4 cut(s) 525, 791, 1118, 1286
ZraI GACGTC 1 cut(s) 148
Zsp2I ATGCAT 1 cut(s) 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.