Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0005790

Physical Location & Seq

Genomic Coordinates Reverse (-)

26697852 .. 26711491

Gene Structure 13640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G011250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1776 bp

ATGAGAGTGTGCCACAGAGAGGTCATCATGTCGATCATGCTGAGGCATATTCTGAAACGAAACTCGAATTCGTACATTGGGCGGCTGGCTTCGGCTTCCGCGTCTGGACGGCTATTCTCGTGGAGGAGGAGGAGGACTTTCTGCAGTGAACCGCAGAGAGAGTCTATTCAATACGACGTCGTGATAGTTGGGGCGGGACCGGCTGGTTTATCGGCGGCGATTAGGTTCAAACAATTGTGCCGTGAAAATGATACTGATTTATCAGTCTGCGTTGTGGAGAAAGGAGCTGAAGTCGGTGCTCACATTATTTCTGGTAATGTCTTTGAACCCCGGGCTCTGGATGAACTTATCCCACAATGGAGACAGGAAGAGTCACCCATCACCGTCCCTGTTTCTTCTGACAAGTTTTTGTTACTTACAAAGAATCATGCATTTTCGCTGCCTTGTCCTTTTAATAACAGAGGAAACTATGTCATAAGTTTAAGTCAGTTAGTACGATGGATGGGAGTGAAGGCAGAAGAATTGGGAGTAGAAATATATCCAGGCTTTGCTGCTAGTGAGATATTATATGATTCAAATGACACTGTTGTTGGCATTCGAACTAATGATATGGGAATATCCAAAGATGGTTCAAAGAAGGAAAATTTTCAACCTGGCATAGAATTGAAAGGGCGGGTCACACTTCTAGCTGAAGGGTGTCGAGGATCATTGTCAGAGAAAATAATGGATAAATACAACTTGAGAGAGAAGGGGCATGCTCAGCATCAGACTTATGCTTTGGGAATCAAAGAGGTTTGGGAAATTGATGAGAGAAAACACAAACCAGGTGCTGTGATTCACACGCTTGGTTGGCCCTTGGATCAGAAGACATATGGAGGTTCATTTCTGTACCACATGAAAGATAGACAGATTTCTATTGGCTTTGTGGTTGCTTTGAATTATCAAAACCCTTTCTTAAGTCCATATGAAGAATTCCAGAAATTAAAGCATCATCCTGCAATCAAGCCACTGCTAGAGGGTGGGACTGTTCTTCAATATGGTGCTCGCACCTTGAATGAAGGTGGCTTTCAGTCTATCCCATATCCAGCTTTCCCTGGAGGAGCAGTTATTGGATGCTCTGCTGGCTTTTTAAATGTACCAAAAATTAAGGGAACACATACTGCAATGAAATCAGGCATGCTAGCTGCAGAAGCATCGTTTGGTGTTCTTCATAAAGGCTCAAGTATGGAAAAATACTGGGATGCTTTAAGGAATTCATGGATATGGGAAGAATTATATAGAGCACGGAACTTCCGACCGGCATTTGAGTATGGACTTATTCCTGGCTTGGCCATAAGTGCGTTAGAACACTACATAATGAAAGGGAGAGCTGCCTTAACGCTGAAGCATGGAAAACCTGATAATGAAGCAACAAATGTTGCAGAGTTCCACTGTCCAATTAAATATCCAAAGCCAGATGGGGTTTTATCTTTTGATATTCCAACCTCCCTACACAGGAGCAATACAAATCATGAGCATGACCAACCAGCTCACCTTCGGTTGAAGGACCCGAAGAAGCCTGAACTTGTCAACTTGCCAGTGTATGCTAGTCCTGAGTCACGATATTGTCCTGCACGTGTTTACGAGTATAACCCTGATGAAACGGGTCAGTTGAAGTTGCAGATCAACGCTCAGAATTGCTTACATTGCAAGGCTTGCGATATCAAAGACCCTAAGCAAAACATACAGTGGACTGCGCCAGAAGGAGGTGGTGGTCCAGGCTATTCAATAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004174 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005759 GO:0006082 GO:0006091 GO:0006520 GO:0006551 GO:0006552 GO:0006629 GO:0006631 GO:0006635 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009055 GO:0009056 GO:0009062 GO:0009063 GO:0009081 GO:0009083 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009987 GO:0015980 GO:0016020 GO:0016021 GO:0016042 GO:0016054 GO:0016491 GO:0016645 GO:0016649 GO:0016722 GO:0017133 GO:0019395 GO:0019752 GO:0019866 GO:0022900 GO:0022904 GO:0030258 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031304 GO:0031305 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0032592 GO:0032787 GO:0032991 GO:0033539 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043783 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045251 GO:0045333 GO:0046395 GO:0048037 GO:0048038 GO:0048039 GO:0050660 GO:0050662 GO:0050896 GO:0051536 GO:0051539 GO:0051540 GO:0055114 GO:0070013 GO:0071704 GO:0072329 GO:0097159 GO:0098573 GO:0098798 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ETF_QO FAD_binding_2 NAD_binding_8

Protein Analysis

591

Amino Acids

66.06

Weight (kDa)

8.78

Isoelectric Point (pI)

38.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ETFQO_UQ-bd	PF21162	258 - 351	2.5e-43	ETF-QO, ubiquinone-binding
Fer4_ETF_QO	PF05187	487 - 589	4.3e-45	Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005790)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43400 AT2G43400
fragaria_vesca	FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960
malus_domestica	MD04G1042900.v1.1
prunus_persica	Prupe.1G197500_v2.0.a1
pyrus_communis	pycom04g03770
rosa_chinensis	RchiOBHm_Chr4g0406421
rosa_laevigata	RLG00000008773
rosa_multiflora	Rmu_ssc0000186.1_g000005
rosa_roxburghii	Rroxscaffold_1G00028480 Rroxscaffold_5G00351230
rosa_rugosa	Rorug04G0069200
rosa_samantha	Rh4AG138000 Rh4BG135300 Rh4CG145700 Rh4DG132700
rosa_wichuraiana	Rw4G011250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	180
AccII	CGCG	1 cut(s)	101
AciI	CCGC	6 cut(s)	82, 99, 152, 194, 215, 673
AclWI	GGATC	2 cut(s)	712, 867
AcoI	YGGCCR	1 cut(s)	1329
AcsI	RAATTY	4 cut(s)	67, 643, 971, 1252
AcuI	CTGAAG	3 cut(s)	309, 711, 1403
AcvI	CACGTG	1 cut(s)	1616
AcyI	GRCGYC	1 cut(s)	177
AfaI	GTAC	4 cut(s)	74, 495, 890, 1137
AfiI	CCNNNNNNNGG	4 cut(s)	19, 337, 1494, 1745
AflII	CTTAAG	1 cut(s)	955
AflIII	ACRYGT	1 cut(s)	1615
AjnI	CCWGG	6 cut(s)	541, 652, 823, 1093, 1321, 1756
AjuI	GAANNNNNNNTTGG	2 cut(s)	1182, 1214
AluBI	AGCT	6 cut(s)	287, 689, 1088, 1184, 1370, 1529
AluI	AGCT	6 cut(s)	287, 689, 1088, 1184, 1370, 1529
Alw21I	GWGCWC	3 cut(s)	301, 1045, 1285
Alw26I	GTCTC	1 cut(s)	355
AlwI	GGATC	2 cut(s)	712, 867
AlwNI	CAGNNNCTG	1 cut(s)	830
Ama87I	CYCGRG	1 cut(s)	330
AoxI	GGCC	2 cut(s)	851, 1329
ApeKI	GCWGC	4 cut(s)	439, 551, 1184, 1370
ApoI	RAATTY	4 cut(s)	67, 643, 971, 1252
ArsI	GACNNNNNNTTYG	2 cut(s)	760, 792
Asp700I	GAANNNNTTC	1 cut(s)	645
AspLEI	GCGC	1 cut(s)	1738
AspS9I	GGNCC	4 cut(s)	197, 852, 1546, 1754
AsuC2I	CCSGG	2 cut(s)	331, 332
AsuHPI	GGTGA	3 cut(s)	366, 373, 1523
AsuII	TTCGAA	1 cut(s)	598
AsuNHI	GCTAGC	1 cut(s)	1180
AvaI	CYCGRG	1 cut(s)	330
AvaII	GGWCC	3 cut(s)	197, 1546, 1754
BalI	TGGCCA	1 cut(s)	1331
BanII	GRGCYC	1 cut(s)	337
BauI	CACGAG	1 cut(s)	118
BbrPI	CACGTG	1 cut(s)	1616
BbsI	GAAGAC	1 cut(s)	872
Bbv12I	GWGCWC	3 cut(s)	301, 1045, 1285
BbvCI	CCTCAGC	1 cut(s)	41
BbvI	GCAGC	4 cut(s)	426, 538, 1171, 1357
BccI	CCATC	5 cut(s)	386, 492, 496, 620, 1451
BceAI	ACGGC	2 cut(s)	125, 225
BcgI	CGANNNNNNTGC	2 cut(s)	1176, 1210
BciT130I	CCWGG	6 cut(s)	543, 654, 825, 1095, 1323, 1758
BcnI	CCSGG	2 cut(s)	331, 332
BcoDI	GTCTC	1 cut(s)	355
BfaI	CTAG	5 cut(s)	555, 686, 1013, 1181, 1587
BfmI	CTRYAG	2 cut(s)	142, 1185
BfrI	CTTAAG	1 cut(s)	955
BisI	GCNGC	6 cut(s)	83, 216, 440, 552, 1185, 1371
BlpI	GCTNAGC	1 cut(s)	759
BlsI	GCNGC	6 cut(s)	84, 217, 441, 553, 1186, 1372
Bme1390I	CCNGG	8 cut(s)	331, 332, 543, 654, 825, 1095, 1323, 1758
Bme18I	GGWCC	3 cut(s)	197, 1546, 1754
BmeT110I	CYCGRG	1 cut(s)	330
BmgT120I	GGNCC	4 cut(s)	197, 852, 1546, 1754
BmiI	GGNNCC	2 cut(s)	198, 1548
BmrFI	CCNGG	8 cut(s)	331, 332, 543, 654, 825, 1095, 1323, 1758
BmrI	ACTGGG	1 cut(s)	1246
BmsI	GCATC	5 cut(s)	772, 997, 1103, 1202, 1231
BmtI	GCTAGC	1 cut(s)	1184
BmuI	ACTGGG	1 cut(s)	1246
BpiI	GAAGAC	1 cut(s)	872
BpmI	CTGGAG	1 cut(s)	1116
Bpu10I	CCTNAGC	2 cut(s)	41, 1713
Bpu1102I	GCTNAGC	1 cut(s)	759
Bpu14I	TTCGAA	1 cut(s)	598
BpuEI	CTTGAG	2 cut(s)	760, 1204
BpuMI	CCSGG	2 cut(s)	331, 332
BsaAI	YACGTR	1 cut(s)	1616
BsaHI	GRCGYC	1 cut(s)	177
BsaJI	CCNNGG	4 cut(s)	329, 330, 855, 1093
BsaXI	ACNNNNNCTCC	4 cut(s)	276, 306, 1089, 1119
Bsc4I	CCNNNNNNNGG	4 cut(s)	19, 337, 1494, 1745
Bse118I	RCCGGY	2 cut(s)	199, 1297
Bse1I	ACTGG	2 cut(s)	1241, 1577
Bse3DI	GCAATG	2 cut(s)	1170, 1684
BseBI	CCWGG	6 cut(s)	543, 654, 825, 1095, 1323, 1758
BseDI	CCNNGG	4 cut(s)	329, 330, 855, 1093
BseGI	GGATG	5 cut(s)	346, 507, 991, 1118, 1246
BseLI	CCNNNNNNNGG	4 cut(s)	19, 337, 1494, 1745
BseMI	GCAATG	2 cut(s)	1170, 1684
BseMII	CTCAG	4 cut(s)	32, 773, 1584, 1685
BseNI	ACTGG	2 cut(s)	1241, 1577
BseRI	GAGGAG	4 cut(s)	139, 142, 145, 1113
BseXI	GCAGC	4 cut(s)	426, 538, 1171, 1357
BsgI	GTGCAG	1 cut(s)	1596
Bsh1236I	CGCG	1 cut(s)	101
Bsh1285I	CGRYCG	1 cut(s)	1298
BshFI	GGCC	2 cut(s)	853, 1331
BsiEI	CGRYCG	1 cut(s)	1298
BsiHKAI	GWGCWC	3 cut(s)	301, 1045, 1285
BsiHKCI	CYCGRG	1 cut(s)	330
BsiSI	CCGG	3 cut(s)	200, 331, 1298
BslFI	GGGAC	3 cut(s)	210, 371, 1036
BslI	CCNNNNNNNGG	4 cut(s)	19, 337, 1494, 1745
BsmAI	GTCTC	1 cut(s)	355
BsmFI	GGGAC	3 cut(s)	210, 371, 1036
BsmI	GAATGC	1 cut(s)	594
BsnI	GGCC	2 cut(s)	853, 1331
BsoBI	CYCGRG	1 cut(s)	330
Bsp119I	TTCGAA	1 cut(s)	598
Bsp1286I	GDGCHC	4 cut(s)	301, 337, 1045, 1285
Bsp143I	GATC	4 cut(s)	33, 704, 859, 1662
Bsp1720I	GCTNAGC	1 cut(s)	759
BspACI	CCGC	6 cut(s)	82, 99, 152, 194, 215, 673
BspANI	GGCC	2 cut(s)	853, 1331
BspCNI	CTCAG	4 cut(s)	33, 772, 1585, 1684
BspFNI	CGCG	1 cut(s)	101
BspHI	TCATGA	1 cut(s)	1510
BspLI	GGNNCC	2 cut(s)	198, 1548
BspMAI	CTGCAG	2 cut(s)	146, 1189
BspOI	GCTAGC	1 cut(s)	1184
BspPI	GGATC	2 cut(s)	712, 867
BspT104I	TTCGAA	1 cut(s)	598
BspTI	CTTAAG	1 cut(s)	955
BsrDI	GCAATG	2 cut(s)	1170, 1684
BsrFI	RCCGGY	2 cut(s)	199, 1297
BsrI	ACTGG	2 cut(s)	1241, 1577
BssAI	RCCGGY	2 cut(s)	199, 1297
BssECI	CCNNGG	4 cut(s)	329, 330, 855, 1093
BssMI	GATC	4 cut(s)	33, 704, 859, 1662
BssNI	GRCGYC	1 cut(s)	177
BssSI	CACGAG	1 cut(s)	118
BssT1I	CCWWGG	1 cut(s)	855
Bst2BI	CACGAG	1 cut(s)	118
Bst2UI	CCWGG	6 cut(s)	543, 654, 825, 1095, 1323, 1758
Bst4CI	ACNGT	5 cut(s)	385, 586, 1027, 1433, 1728
Bst6I	CTCTTC	1 cut(s)	363
BstACI	GRCGYC	1 cut(s)	177
BstAFI	CTTAAG	1 cut(s)	955
BstAPI	GCANNNNNTGC	1 cut(s)	1695
BstBAI	YACGTR	1 cut(s)	1616
BstBI	TTCGAA	1 cut(s)	598
BstC8I	GCNNGC	7 cut(s)	87, 756, 1045, 1123, 1178, 1182, 1696
BstDEI	CTNAG	5 cut(s)	41, 759, 1593, 1671, 1713
BstF5I	GGATG	5 cut(s)	346, 507, 991, 1118, 1246
BstFNI	CGCG	1 cut(s)	101
BstHHI	GCGC	1 cut(s)	1738
BstKTI	GATC	4 cut(s)	36, 707, 862, 1665
BstMAI	GTCTC	1 cut(s)	355
BstMBI	GATC	4 cut(s)	33, 704, 859, 1662
BstMCI	CGRYCG	1 cut(s)	1298
BstMWI	GCNNNNNNNGC	8 cut(s)	200, 760, 850, 1122, 1190, 1337, 1686, 1695
BstNI	CCWGG	6 cut(s)	543, 654, 825, 1095, 1323, 1758
BstNSI	RCATGY	2 cut(s)	758, 1180
BstSCI	CCNGG	8 cut(s)	329, 330, 541, 652, 823, 1093, 1321, 1756
BstSFI	CTRYAG	2 cut(s)	142, 1185
BstUI	CGCG	1 cut(s)	101
BstV1I	GCAGC	4 cut(s)	426, 538, 1171, 1357
BstV2I	GAAGAC	1 cut(s)	872
BsuRI	GGCC	2 cut(s)	853, 1331
BtsCI	GGATG	5 cut(s)	346, 507, 991, 1118, 1246
BtsI	GCAGTG	2 cut(s)	151, 1007
BtsIMutI	CAGTG	6 cut(s)	151, 582, 1007, 1429, 1584, 1733
Cac8I	GCNNGC	7 cut(s)	87, 756, 1045, 1123, 1178, 1182, 1696
CaiI	CAGNNNCTG	1 cut(s)	830
CciI	TCATGA	1 cut(s)	1510
CfoI	GCGC	1 cut(s)	1738
Cfr10I	RCCGGY	2 cut(s)	199, 1297
Cfr13I	GGNCC	4 cut(s)	197, 852, 1546, 1754
Cfr9I	CCCGGG	1 cut(s)	330
CseI	GACGC	1 cut(s)	90
CsiI	ACCWGGT	1 cut(s)	823
Csp6I	GTAC	4 cut(s)	73, 494, 889, 1136
CviQI	GTAC	4 cut(s)	73, 494, 889, 1136
DdeI	CTNAG	5 cut(s)	41, 759, 1593, 1671, 1713
DpnI	GATC	4 cut(s)	35, 706, 861, 1664
DpnII	GATC	4 cut(s)	33, 704, 859, 1662
DraI	TTTAAA	1 cut(s)	1131
EaeI	YGGCCR	1 cut(s)	1329
Eam1104I	CTCTTC	1 cut(s)	363
EarI	CTCTTC	1 cut(s)	363
Eco130I	CCWWGG	1 cut(s)	855
Eco24I	GRGCYC	1 cut(s)	337
Eco32I	GATATC	1 cut(s)	1702
Eco47I	GGWCC	3 cut(s)	197, 1546, 1754
Eco57I	CTGAAG	3 cut(s)	309, 711, 1403
Eco72I	CACGTG	1 cut(s)	1616
Eco88I	CYCGRG	1 cut(s)	330
EcoO109I	RGGNCCY	1 cut(s)	1546
EcoRI	GAATTC	3 cut(s)	67, 971, 1252
EcoRII	CCWGG	6 cut(s)	541, 652, 823, 1093, 1321, 1756
EcoRV	GATATC	1 cut(s)	1702
EcoT14I	CCWWGG	1 cut(s)	855
EcoT22I	ATGCAT	1 cut(s)	433
EcoT38I	GRGCYC	1 cut(s)	337
ErhI	CCWWGG	1 cut(s)	855
FaqI	GGGAC	3 cut(s)	210, 371, 1036
FauI	CCCGC	2 cut(s)	187, 666
FauNDI	CATATG	2 cut(s)	871, 964
Fnu4HI	GCNGC	6 cut(s)	83, 216, 440, 552, 1185, 1371
FokI	GGATG	5 cut(s)	353, 514, 978, 1125, 1253
FriOI	GRGCYC	1 cut(s)	337
Fsp4HI	GCNGC	6 cut(s)	83, 216, 440, 552, 1185, 1371
FspBI	CTAG	5 cut(s)	555, 686, 1013, 1181, 1587
GlaI	GCGC	1 cut(s)	1737
GluI	GCNGC	6 cut(s)	83, 216, 440, 552, 1185, 1371
GsuI	CTGGAG	1 cut(s)	1116
HaeIII	GGCC	2 cut(s)	853, 1331
HapII	CCGG	3 cut(s)	200, 331, 1298
HgaI	GACGC	1 cut(s)	90
HhaI	GCGC	1 cut(s)	1738
Hin1I	GRCGYC	1 cut(s)	177
Hin6I	GCGC	1 cut(s)	1736
HinP1I	GCGC	1 cut(s)	1736
HincII	GTYRAC	1 cut(s)	1570
HindII	GTYRAC	1 cut(s)	1570
HinfI	GANTC	7 cut(s)	161, 371, 424, 572, 783, 835, 1595
HpaII	CCGG	3 cut(s)	200, 331, 1298
HphI	GGTGA	3 cut(s)	366, 373, 1523
Hpy166II	GTNNAC	4 cut(s)	149, 1570, 1621, 1731
Hpy188I	TCNGA	7 cut(s)	54, 400, 715, 768, 864, 1295, 1674
Hpy188III	TCNNGA	7 cut(s)	105, 181, 338, 976, 1511, 1592, 1599
Hpy8I	GTNNAC	4 cut(s)	149, 1570, 1621, 1731
Hpy99I	CGWCG	2 cut(s)	179, 182
HpyAV	CCTTC	8 cut(s)	505, 631, 686, 742, 1052, 1537, 1544, 1736
HpyCH4III	ACNGT	5 cut(s)	385, 586, 1027, 1433, 1728
HpyCH4IV	ACGT	2 cut(s)	177, 1615
HpyCH4V	TGCA	9 cut(s)	144, 431, 998, 1163, 1187, 1421, 1613, 1660, 1689
HpyF10VI	GCNNNNNNNGC	8 cut(s)	200, 760, 850, 1122, 1190, 1337, 1686, 1695
HpyF3I	CTNAG	5 cut(s)	41, 759, 1593, 1671, 1713
HpySE526I	ACGT	2 cut(s)	177, 1615
Hsp92I	GRCGYC	1 cut(s)	177
HspAI	GCGC	1 cut(s)	1736
Kzo9I	GATC	4 cut(s)	33, 704, 859, 1662
LmnI	GCTCC	3 cut(s)	284, 1100, 1497
Lsp1109I	GCAGC	4 cut(s)	426, 538, 1171, 1357
LweI	GCATC	5 cut(s)	772, 997, 1103, 1202, 1231
MabI	ACCWGGT	1 cut(s)	823
MaeI	CTAG	5 cut(s)	555, 686, 1013, 1181, 1587
MaeII	ACGT	2 cut(s)	177, 1615
MaeIII	GTNAC	4 cut(s)	372, 411, 676, 1596
MalI	GATC	4 cut(s)	35, 706, 861, 1664
MboI	GATC	4 cut(s)	33, 704, 859, 1662
MboII	GAAGA	9 cut(s)	380, 387, 530, 877, 980, 1022, 1199, 1280, 1564
MfeI	CAATTG	1 cut(s)	233
MhlI	GDGCHC	4 cut(s)	301, 337, 1045, 1285
MlsI	TGGCCA	1 cut(s)	1331
MluNI	TGGCCA	1 cut(s)	1331
MlyI	GAGTC	3 cut(s)	170, 380, 1604
MmeI	TCCRAC	2 cut(s)	1318, 1505
Mox20I	TGGCCA	1 cut(s)	1331
Mph1103I	ATGCAT	1 cut(s)	433
MroXI	GAANNNNTTC	1 cut(s)	645
MscI	TGGCCA	1 cut(s)	1331
MseI	TTAA	9 cut(s)	453, 482, 956, 983, 1130, 1146, 1247, 1376, 1440
MslI	CAYNNNNRTG	2 cut(s)	1261, 1515
Msp20I	TGGCCA	1 cut(s)	1331
MspCI	CTTAAG	1 cut(s)	955
MspI	CCGG	3 cut(s)	200, 331, 1298
MspR9I	CCNGG	8 cut(s)	331, 332, 543, 654, 825, 1095, 1323, 1758
MunI	CAATTG	1 cut(s)	233
Mva1269I	GAATGC	1 cut(s)	594
MvaI	CCWGG	6 cut(s)	543, 654, 825, 1095, 1323, 1758
MvnI	CGCG	1 cut(s)	101
MwoI	GCNNNNNNNGC	8 cut(s)	200, 760, 850, 1122, 1190, 1337, 1686, 1695
NciI	CCSGG	2 cut(s)	331, 332
NdeI	CATATG	2 cut(s)	871, 964
NdeII	GATC	4 cut(s)	33, 704, 859, 1662
NheI	GCTAGC	1 cut(s)	1180
NlaIV	GGNNCC	2 cut(s)	198, 1548
NmuCI	GTSAC	3 cut(s)	372, 676, 1596
NsiI	ATGCAT	1 cut(s)	433
NspI	RCATGY	2 cut(s)	758, 1180
NspV	TTCGAA	1 cut(s)	598
PaeI	GCATGC	2 cut(s)	758, 1180
PagI	TCATGA	1 cut(s)	1510
PcsI	WCGNNNNNNNCGW	2 cut(s)	98, 1291
PctI	GAATGC	1 cut(s)	594
PdmI	GAANNNNTTC	1 cut(s)	645
PfeI	GAWTC	4 cut(s)	424, 572, 783, 835
PkrI	GCNGC	6 cut(s)	84, 217, 441, 553, 1186, 1372
PleI	GAGTC	3 cut(s)	169, 379, 1603
PmaCI	CACGTG	1 cut(s)	1616
PmlI	CACGTG	1 cut(s)	1616
PpsI	GAGTC	3 cut(s)	169, 379, 1603
Ppu21I	YACGTR	1 cut(s)	1616
PpuMI	RGGWCCY	1 cut(s)	1546
Psp5II	RGGWCCY	1 cut(s)	1546
Psp6I	CCWGG	6 cut(s)	541, 652, 823, 1093, 1321, 1756
PspCI	CACGTG	1 cut(s)	1616
PspGI	CCWGG	6 cut(s)	541, 652, 823, 1093, 1321, 1756
PspN4I	GGNNCC	2 cut(s)	198, 1548
PspPI	GGNCC	4 cut(s)	197, 852, 1546, 1754
PspPPI	RGGWCCY	1 cut(s)	1546
PstI	CTGCAG	2 cut(s)	146, 1189
PstNI	CAGNNNCTG	1 cut(s)	830
RsaI	GTAC	4 cut(s)	74, 495, 890, 1137
RsaNI	GTAC	4 cut(s)	73, 494, 889, 1136
RseI	CAYNNNNRTG	2 cut(s)	1261, 1515
SaqAI	TTAA	9 cut(s)	453, 482, 956, 983, 1130, 1146, 1247, 1376, 1440
SatI	GCNGC	6 cut(s)	83, 216, 440, 552, 1185, 1371
Sau3AI	GATC	4 cut(s)	33, 704, 859, 1662
Sau96I	GGNCC	4 cut(s)	197, 852, 1546, 1754
SchI	GAGTC	3 cut(s)	170, 380, 1604
ScrFI	CCNGG	8 cut(s)	331, 332, 543, 654, 825, 1095, 1323, 1758
SduI	GDGCHC	4 cut(s)	301, 337, 1045, 1285
SexAI	ACCWGGT	1 cut(s)	823
SfaNI	GCATC	5 cut(s)	772, 997, 1103, 1202, 1231
SfcI	CTRYAG	2 cut(s)	142, 1185
SfuI	TTCGAA	1 cut(s)	598
SinI	GGWCC	3 cut(s)	197, 1546, 1754
SmaI	CCCGGG	1 cut(s)	332
SmiMI	CAYNNNNRTG	2 cut(s)	1261, 1515
SmlI	CTYRAG	3 cut(s)	739, 955, 1219
SmoI	CTYRAG	3 cut(s)	739, 955, 1219
SphI	GCATGC	2 cut(s)	758, 1180
SsiI	CCGC	6 cut(s)	82, 99, 152, 194, 215, 673
SspMI	CTAG	5 cut(s)	555, 686, 1013, 1181, 1587
StyD4I	CCNGG	8 cut(s)	329, 330, 541, 652, 823, 1093, 1321, 1756
StyI	CCWWGG	1 cut(s)	855
TaaI	ACNGT	5 cut(s)	385, 586, 1027, 1433, 1728
TaiI	ACGT	2 cut(s)	180, 1618
TaqI	TCGA	4 cut(s)	32, 65, 598, 700
TauI	GCSGC	2 cut(s)	85, 218
TfiI	GAWTC	4 cut(s)	424, 572, 783, 835
Tru1I	TTAA	9 cut(s)	453, 482, 956, 983, 1130, 1146, 1247, 1376, 1440
Tru9I	TTAA	9 cut(s)	453, 482, 956, 983, 1130, 1146, 1247, 1376, 1440
TscAI	CASTG	6 cut(s)	151, 589, 1014, 1436, 1584, 1733
TseFI	GTSAC	3 cut(s)	372, 676, 1596
TseI	GCWGC	4 cut(s)	439, 551, 1184, 1370
Tsp45I	GTSAC	3 cut(s)	372, 676, 1596
TspGWI	ACGGA	1 cut(s)	1300
TspMI	CCCGGG	1 cut(s)	330
TspRI	CASTG	6 cut(s)	151, 589, 1014, 1436, 1584, 1733
Vha464I	CTTAAG	1 cut(s)	955
VpaK11BI	GGWCC	3 cut(s)	197, 1546, 1754
XapI	RAATTY	4 cut(s)	67, 643, 971, 1252
XceI	RCATGY	2 cut(s)	758, 1180
XmaI	CCCGGG	1 cut(s)	330
XmnI	GAANNNNTTC	1 cut(s)	645
XspI	CTAG	5 cut(s)	555, 686, 1013, 1181, 1587
ZraI	GACGTC	1 cut(s)	178
Zsp2I	ATGCAT	1 cut(s)	433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.