Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000186.1

Orthogroup ID

OG0005790

Physical Location & Seq

Genomic Coordinates Reverse (-)

24819 .. 38965

Gene Structure 14147 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000186.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

atgtcgatcatgctgaggcatattctgaaacgaaactcgaattcgtacattgggcggctggcttcggcttccgcgtctggacggctattctcgtggaggaggaggactttctgcagtgaaccgcagagagagtctattcaatacgacgtcgtgatagttggggcgggaccggctggtttatcggcggcgattaggttcaaacaattgtgccgtgaaaatgatactgatttatcagtctgcgttgtggagaaaggagctgaagtcggtgctcacattatttctggtaatgtctttgaaccccgggctctggatgaacttatcccacaatggagacaggaagagtcacccatcaccgtccctgtttcttctgacaagtttttgttacttacaaagaatcatgcattttcgctgccttgtccttttaataacagaggaaactatgtcataagtttaagtcagttagtacgatggatgggagtgaaggcagaagaattgggagtagaaatatatccaggctttgctgctagtgagatattatatgattcaaatgacactgttgttggcattcgaactaatgatatgggaatatccaaagatggttcaaagaaggaaaattttcaacctggcatagaattgaaagggcgggtcacacttctagctgaagggtgtcgaggatcattgtcagagaaaataatggataaatacaacttgagagagaaggggcatgctcagcatcagacttatgctttgggaatcaaagaggtttgggaaattgatgagagaaaacacaaaccaggtgctgtgattcacacgcttggttggcccttggatcagaagacatatggaggttcatttctgtaccacatgaaagatagacagatttctattggctttgtggttgctttgaattatcaaaaccctttcttaagtccatatgaagaattccaggtgactaaatcgttgcatcatcctgcaatcaagccactgctagagggtgggactgttcttcaatatggtgctcgcaccttgaatgaaggtggctttcagtctatcccatatccagctttccctggaggagcagttattggatgctctgctggctttttaaatgtaccaaaaattaagggaacacatactgcaatgaaatcaggcatgctagctgcggaagcatcgtttggtgttcttcataaaggctcaagtatggaaaaatactgggatgctttaaggaattcgtggatatgggaagaattatatagagcacggaacttccgaccggcatttgagtatggacttattcctggcttggccataagtgcgttagaacactacataatgaaagggagagctgccttaacgctgaagcatggaaaacctgataatgaagcaacaaatgttgcagagttccactgtccaattaaatatccaaagccagatggggttttatcttttgatattccaacctccctacacaggagcaatacaaatcatgagcatgaccaaccagctcaccttcggttgaaggacccgaagaagcctgaacttgtcaacttgccagtgtatgctagtcctgagtcacgatattgtcctgcacgtgtttacgagtataaccctgatgaaacgggtcagctgaagttgcagatcaacgctcagaattgcttacattgcaaggcttgcgatatcaaagaccctaagcaaaacatacagtggactgcgccagaaggaggtggtggtccaggctattcaataatgtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004174 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005759 GO:0006082 GO:0006091 GO:0006520 GO:0006551 GO:0006552 GO:0006629 GO:0006631 GO:0006635 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009055 GO:0009056 GO:0009062 GO:0009063 GO:0009081 GO:0009083 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009646 GO:0009987 GO:0015980 GO:0016020 GO:0016021 GO:0016042 GO:0016054 GO:0016491 GO:0016645 GO:0016649 GO:0016722 GO:0017133 GO:0019395 GO:0019752 GO:0019866 GO:0022900 GO:0022904 GO:0030258 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031304 GO:0031305 GO:0031966 GO:0031967 GO:0031974 GO:0031975 GO:0032592 GO:0032787 GO:0032991 GO:0033539 GO:0034440 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043783 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045251 GO:0045333 GO:0046395 GO:0048037 GO:0048038 GO:0048039 GO:0050660 GO:0050662 GO:0050896 GO:0051536 GO:0051539 GO:0051540 GO:0055114 GO:0070013 GO:0071704 GO:0072329 GO:0097159 GO:0098573 GO:0098798 GO:1901265 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1901605 GO:1901606 GO:1902494 GO:1990204

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ETF_QO FAD_binding_2 NAD_binding_8

Protein Analysis

583

Amino Acids

64.94

Weight (kDa)

8.56

Isoelectric Point (pI)

37.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005790)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G43400 AT2G43400
fragaria_vesca	FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960 FvH4_4g10960
malus_domestica	MD04G1042900.v1.1
prunus_persica	Prupe.1G197500_v2.0.a1
pyrus_communis	pycom04g03770
rosa_chinensis	RchiOBHm_Chr4g0406421
rosa_laevigata	RLG00000008773
rosa_multiflora	Rmu_ssc0000186.1_g000005
rosa_roxburghii	Rroxscaffold_1G00028480 Rroxscaffold_5G00351230
rosa_rugosa	Rorug04G0069200
rosa_samantha	Rh4AG138000 Rh4BG135300 Rh4CG145700 Rh4DG132700
rosa_wichuraiana	Rw4G011250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	150
AccII	CGCG	1 cut(s)	74
AciI	CCGC	7 cut(s)	55, 72, 122, 164, 185, 643, 1163
AclWI	GGATC	2 cut(s)	682, 837
AcoI	YGGCCR	1 cut(s)	1305
AcsI	RAATTY	4 cut(s)	40, 613, 941, 1228
AcuI	CTGAAG	4 cut(s)	279, 681, 1379, 1649
AcvI	CACGTG	1 cut(s)	1592
AcyI	GRCGYC	1 cut(s)	147
AfaI	GTAC	4 cut(s)	47, 465, 860, 1113
AfiI	CCNNNNNNNGG	3 cut(s)	307, 1470, 1721
AflII	CTTAAG	1 cut(s)	925
AflIII	ACRYGT	1 cut(s)	1591
AjnI	CCWGG	7 cut(s)	511, 622, 793, 945, 1069, 1297, 1732
AjuI	GAANNNNNNNTTGG	2 cut(s)	1158, 1190
AluBI	AGCT	7 cut(s)	257, 659, 1064, 1160, 1346, 1505, 1627
AluI	AGCT	7 cut(s)	257, 659, 1064, 1160, 1346, 1505, 1627
Alw21I	GWGCWC	3 cut(s)	271, 1021, 1261
Alw26I	GTCTC	1 cut(s)	325
AlwI	GGATC	2 cut(s)	682, 837
AlwNI	CAGNNNCTG	1 cut(s)	800
Ama87I	CYCGRG	1 cut(s)	300
AoxI	GGCC	2 cut(s)	821, 1305
ApeKI	GCWGC	4 cut(s)	409, 521, 1160, 1346
ApoI	RAATTY	4 cut(s)	40, 613, 941, 1228
ArsI	GACNNNNNNTTYG	2 cut(s)	730, 762
Asp700I	GAANNNNTTC	1 cut(s)	615
AspLEI	GCGC	1 cut(s)	1714
AspS9I	GGNCC	4 cut(s)	167, 822, 1522, 1730
AsuC2I	CCSGG	2 cut(s)	301, 302
AsuHPI	GGTGA	4 cut(s)	336, 343, 961, 1499
AsuII	TTCGAA	1 cut(s)	568
AsuNHI	GCTAGC	1 cut(s)	1156
AvaI	CYCGRG	1 cut(s)	300
AvaII	GGWCC	3 cut(s)	167, 1522, 1730
BalI	TGGCCA	1 cut(s)	1307
BanII	GRGCYC	1 cut(s)	307
BauI	CACGAG	1 cut(s)	91
BbrPI	CACGTG	1 cut(s)	1592
BbsI	GAAGAC	1 cut(s)	842
Bbv12I	GWGCWC	3 cut(s)	271, 1021, 1261
BbvCI	CCTCAGC	1 cut(s)	14
BbvI	GCAGC	4 cut(s)	396, 508, 1147, 1333
BccI	CCATC	5 cut(s)	356, 462, 466, 590, 1427
BceAI	ACGGC	2 cut(s)	98, 195
BciT130I	CCWGG	7 cut(s)	513, 624, 795, 947, 1071, 1299, 1734
BcnI	CCSGG	2 cut(s)	301, 302
BcoDI	GTCTC	1 cut(s)	325
BfaI	CTAG	5 cut(s)	525, 656, 989, 1157, 1563
BfmI	CTRYAG	1 cut(s)	112
BfrI	CTTAAG	1 cut(s)	925
BisI	GCNGC	6 cut(s)	56, 186, 410, 522, 1161, 1347
BlpI	GCTNAGC	1 cut(s)	729
BlsI	GCNGC	6 cut(s)	57, 187, 411, 523, 1162, 1348
Bme1390I	CCNGG	9 cut(s)	301, 302, 513, 624, 795, 947, 1071, 1299, 1734
Bme18I	GGWCC	3 cut(s)	167, 1522, 1730
BmeT110I	CYCGRG	1 cut(s)	300
BmgT120I	GGNCC	4 cut(s)	167, 822, 1522, 1730
BmiI	GGNNCC	2 cut(s)	168, 1524
BmrFI	CCNGG	9 cut(s)	301, 302, 513, 624, 795, 947, 1071, 1299, 1734
BmrI	ACTGGG	1 cut(s)	1222
BmsI	GCATC	5 cut(s)	742, 973, 1079, 1178, 1207
BmtI	GCTAGC	1 cut(s)	1160
BmuI	ACTGGG	1 cut(s)	1222
BpiI	GAAGAC	1 cut(s)	842
BpmI	CTGGAG	1 cut(s)	1092
Bpu10I	CCTNAGC	2 cut(s)	14, 1689
Bpu1102I	GCTNAGC	1 cut(s)	729
Bpu14I	TTCGAA	1 cut(s)	568
BpuEI	CTTGAG	2 cut(s)	730, 1180
BpuMI	CCSGG	2 cut(s)	301, 302
BsaAI	YACGTR	1 cut(s)	1592
BsaHI	GRCGYC	1 cut(s)	147
BsaJI	CCNNGG	4 cut(s)	299, 300, 825, 1069
BsaXI	ACNNNNNCTCC	4 cut(s)	246, 276, 1065, 1095
Bsc4I	CCNNNNNNNGG	3 cut(s)	307, 1470, 1721
Bse118I	RCCGGY	2 cut(s)	169, 1273
Bse1I	ACTGG	2 cut(s)	1217, 1553
Bse3DI	GCAATG	2 cut(s)	1146, 1660
BseBI	CCWGG	7 cut(s)	513, 624, 795, 947, 1071, 1299, 1734
BseDI	CCNNGG	4 cut(s)	299, 300, 825, 1069
BseGI	GGATG	5 cut(s)	316, 477, 967, 1094, 1222
BseLI	CCNNNNNNNGG	3 cut(s)	307, 1470, 1721
BseMI	GCAATG	2 cut(s)	1146, 1660
BseMII	CTCAG	4 cut(s)	5, 743, 1560, 1661
BseNI	ACTGG	2 cut(s)	1217, 1553
BseRI	GAGGAG	3 cut(s)	112, 115, 1089
BseXI	GCAGC	4 cut(s)	396, 508, 1147, 1333
BsgI	GTGCAG	1 cut(s)	1572
Bsh1236I	CGCG	1 cut(s)	74
Bsh1285I	CGRYCG	1 cut(s)	1274
BshFI	GGCC	2 cut(s)	823, 1307
BsiEI	CGRYCG	1 cut(s)	1274
BsiHKAI	GWGCWC	3 cut(s)	271, 1021, 1261
BsiHKCI	CYCGRG	1 cut(s)	300
BsiSI	CCGG	3 cut(s)	170, 301, 1274
BslFI	GGGAC	3 cut(s)	180, 341, 1012
BslI	CCNNNNNNNGG	3 cut(s)	307, 1470, 1721
BsmAI	GTCTC	1 cut(s)	325
BsmFI	GGGAC	3 cut(s)	180, 341, 1012
BsmI	GAATGC	1 cut(s)	564
BsnI	GGCC	2 cut(s)	823, 1307
BsoBI	CYCGRG	1 cut(s)	300
Bsp119I	TTCGAA	1 cut(s)	568
Bsp1286I	GDGCHC	4 cut(s)	271, 307, 1021, 1261
Bsp143I	GATC	4 cut(s)	6, 674, 829, 1638
Bsp1720I	GCTNAGC	1 cut(s)	729
BspACI	CCGC	7 cut(s)	55, 72, 122, 164, 185, 643, 1163
BspANI	GGCC	2 cut(s)	823, 1307
BspCNI	CTCAG	4 cut(s)	6, 742, 1561, 1660
BspFNI	CGCG	1 cut(s)	74
BspHI	TCATGA	1 cut(s)	1486
BspLI	GGNNCC	2 cut(s)	168, 1524
BspMAI	CTGCAG	1 cut(s)	116
BspOI	GCTAGC	1 cut(s)	1160
BspPI	GGATC	2 cut(s)	682, 837
BspT104I	TTCGAA	1 cut(s)	568
BspTI	CTTAAG	1 cut(s)	925
BsrDI	GCAATG	2 cut(s)	1146, 1660
BsrFI	RCCGGY	2 cut(s)	169, 1273
BsrI	ACTGG	2 cut(s)	1217, 1553
BssAI	RCCGGY	2 cut(s)	169, 1273
BssECI	CCNNGG	4 cut(s)	299, 300, 825, 1069
BssMI	GATC	4 cut(s)	6, 674, 829, 1638
BssNI	GRCGYC	1 cut(s)	147
BssSI	CACGAG	1 cut(s)	91
BssT1I	CCWWGG	1 cut(s)	825
Bst2BI	CACGAG	1 cut(s)	91
Bst2UI	CCWGG	7 cut(s)	513, 624, 795, 947, 1071, 1299, 1734
Bst4CI	ACNGT	5 cut(s)	355, 556, 1003, 1409, 1704
Bst6I	CTCTTC	1 cut(s)	333
BstACI	GRCGYC	1 cut(s)	147
BstAFI	CTTAAG	1 cut(s)	925
BstAPI	GCANNNNNTGC	1 cut(s)	1671
BstBAI	YACGTR	1 cut(s)	1592
BstBI	TTCGAA	1 cut(s)	568
BstC8I	GCNNGC	7 cut(s)	60, 726, 1021, 1099, 1154, 1158, 1672
BstDEI	CTNAG	5 cut(s)	14, 729, 1569, 1647, 1689
BstF5I	GGATG	5 cut(s)	316, 477, 967, 1094, 1222
BstFNI	CGCG	1 cut(s)	74
BstHHI	GCGC	1 cut(s)	1714
BstKTI	GATC	4 cut(s)	9, 677, 832, 1641
BstMAI	GTCTC	1 cut(s)	325
BstMBI	GATC	4 cut(s)	6, 674, 829, 1638
BstMCI	CGRYCG	1 cut(s)	1274
BstMWI	GCNNNNNNNGC	9 cut(s)	170, 730, 820, 1098, 1166, 1313, 1633, 1662, 1671
BstNI	CCWGG	7 cut(s)	513, 624, 795, 947, 1071, 1299, 1734
BstNSI	RCATGY	2 cut(s)	728, 1156
BstSCI	CCNGG	9 cut(s)	299, 300, 511, 622, 793, 945, 1069, 1297, 1732
BstSFI	CTRYAG	1 cut(s)	112
BstUI	CGCG	1 cut(s)	74
BstV1I	GCAGC	4 cut(s)	396, 508, 1147, 1333
BstV2I	GAAGAC	1 cut(s)	842
BsuRI	GGCC	2 cut(s)	823, 1307
BtsCI	GGATG	5 cut(s)	316, 477, 967, 1094, 1222
BtsI	GCAGTG	2 cut(s)	121, 983
BtsIMutI	CAGTG	6 cut(s)	121, 552, 983, 1405, 1560, 1709
Cac8I	GCNNGC	7 cut(s)	60, 726, 1021, 1099, 1154, 1158, 1672
CaiI	CAGNNNCTG	1 cut(s)	800
CciI	TCATGA	1 cut(s)	1486
CfoI	GCGC	1 cut(s)	1714
Cfr10I	RCCGGY	2 cut(s)	169, 1273
Cfr13I	GGNCC	4 cut(s)	167, 822, 1522, 1730
Cfr9I	CCCGGG	1 cut(s)	300
CseI	GACGC	1 cut(s)	63
CsiI	ACCWGGT	1 cut(s)	793
Csp6I	GTAC	4 cut(s)	46, 464, 859, 1112
CviAII	CATG	8 cut(s)	10, 398, 725, 865, 1153, 1364, 1487, 1493
CviQI	GTAC	4 cut(s)	46, 464, 859, 1112
DdeI	CTNAG	5 cut(s)	14, 729, 1569, 1647, 1689
DpnI	GATC	4 cut(s)	8, 676, 831, 1640
DpnII	GATC	4 cut(s)	6, 674, 829, 1638
DraI	TTTAAA	1 cut(s)	1107
EaeI	YGGCCR	1 cut(s)	1305
Eam1104I	CTCTTC	1 cut(s)	333
EarI	CTCTTC	1 cut(s)	333
Eco130I	CCWWGG	1 cut(s)	825
Eco24I	GRGCYC	1 cut(s)	307
Eco32I	GATATC	1 cut(s)	1678
Eco47I	GGWCC	3 cut(s)	167, 1522, 1730
Eco57I	CTGAAG	4 cut(s)	279, 681, 1379, 1649
Eco72I	CACGTG	1 cut(s)	1592
Eco88I	CYCGRG	1 cut(s)	300
EcoO109I	RGGNCCY	1 cut(s)	1522
EcoRI	GAATTC	3 cut(s)	40, 941, 1228
EcoRII	CCWGG	7 cut(s)	511, 622, 793, 945, 1069, 1297, 1732
EcoRV	GATATC	1 cut(s)	1678
EcoT14I	CCWWGG	1 cut(s)	825
EcoT22I	ATGCAT	1 cut(s)	403
EcoT38I	GRGCYC	1 cut(s)	307
ErhI	CCWWGG	1 cut(s)	825
FaeI	CATG	8 cut(s)	13, 401, 728, 868, 1156, 1367, 1490, 1496
FaqI	GGGAC	3 cut(s)	180, 341, 1012
FatI	CATG	8 cut(s)	9, 397, 724, 864, 1152, 1363, 1486, 1492
FauI	CCCGC	2 cut(s)	157, 636
FauNDI	CATATG	2 cut(s)	841, 934
Fnu4HI	GCNGC	6 cut(s)	56, 186, 410, 522, 1161, 1347
FokI	GGATG	5 cut(s)	323, 484, 954, 1101, 1229
FriOI	GRGCYC	1 cut(s)	307
Fsp4HI	GCNGC	6 cut(s)	56, 186, 410, 522, 1161, 1347
FspBI	CTAG	5 cut(s)	525, 656, 989, 1157, 1563
GlaI	GCGC	1 cut(s)	1713
GluI	GCNGC	6 cut(s)	56, 186, 410, 522, 1161, 1347
GsuI	CTGGAG	1 cut(s)	1092
HaeIII	GGCC	2 cut(s)	823, 1307
HapII	CCGG	3 cut(s)	170, 301, 1274
HgaI	GACGC	1 cut(s)	63
HhaI	GCGC	1 cut(s)	1714
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	8 cut(s)	13, 401, 728, 868, 1156, 1367, 1490, 1496
Hin6I	GCGC	1 cut(s)	1712
HinP1I	GCGC	1 cut(s)	1712
HincII	GTYRAC	1 cut(s)	1546
HindII	GTYRAC	1 cut(s)	1546
HinfI	GANTC	7 cut(s)	131, 341, 394, 542, 753, 805, 1571
HpaII	CCGG	3 cut(s)	170, 301, 1274
HphI	GGTGA	4 cut(s)	336, 343, 961, 1499
Hpy166II	GTNNAC	4 cut(s)	119, 1546, 1597, 1707
Hpy188I	TCNGA	7 cut(s)	27, 370, 685, 738, 834, 1271, 1650
Hpy188III	TCNNGA	6 cut(s)	78, 151, 308, 1487, 1568, 1575
Hpy8I	GTNNAC	4 cut(s)	119, 1546, 1597, 1707
Hpy99I	CGWCG	2 cut(s)	149, 152
HpyAV	CCTTC	8 cut(s)	475, 601, 656, 712, 1028, 1513, 1520, 1712
HpyCH4III	ACNGT	5 cut(s)	355, 556, 1003, 1409, 1704
HpyCH4IV	ACGT	2 cut(s)	147, 1591
HpyCH4V	TGCA	9 cut(s)	114, 401, 964, 974, 1139, 1397, 1589, 1636, 1665
HpyF10VI	GCNNNNNNNGC	9 cut(s)	170, 730, 820, 1098, 1166, 1313, 1633, 1662, 1671
HpyF3I	CTNAG	5 cut(s)	14, 729, 1569, 1647, 1689
HpySE526I	ACGT	2 cut(s)	147, 1591
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	8 cut(s)	13, 401, 728, 868, 1156, 1367, 1490, 1496
HspAI	GCGC	1 cut(s)	1712
Kzo9I	GATC	4 cut(s)	6, 674, 829, 1638
LmnI	GCTCC	3 cut(s)	254, 1076, 1473
Lsp1109I	GCAGC	4 cut(s)	396, 508, 1147, 1333
LweI	GCATC	5 cut(s)	742, 973, 1079, 1178, 1207
MabI	ACCWGGT	1 cut(s)	793
MaeI	CTAG	5 cut(s)	525, 656, 989, 1157, 1563
MaeII	ACGT	2 cut(s)	147, 1591
MaeIII	GTNAC	5 cut(s)	342, 381, 646, 949, 1572
MalI	GATC	4 cut(s)	8, 676, 831, 1640
MboI	GATC	4 cut(s)	6, 674, 829, 1638
MboII	GAAGA	9 cut(s)	350, 357, 500, 847, 950, 998, 1175, 1256, 1540
MfeI	CAATTG	1 cut(s)	203
MhlI	GDGCHC	4 cut(s)	271, 307, 1021, 1261
MlsI	TGGCCA	1 cut(s)	1307
MluNI	TGGCCA	1 cut(s)	1307
MlyI	GAGTC	3 cut(s)	140, 350, 1580
MmeI	TCCRAC	2 cut(s)	1294, 1481
Mox20I	TGGCCA	1 cut(s)	1307
Mph1103I	ATGCAT	1 cut(s)	403
MroXI	GAANNNNTTC	1 cut(s)	615
MscI	TGGCCA	1 cut(s)	1307
MseI	TTAA	8 cut(s)	423, 452, 926, 1106, 1122, 1223, 1352, 1416
MslI	CAYNNNNRTG	1 cut(s)	1491
Msp20I	TGGCCA	1 cut(s)	1307
MspA1I	CMGCKG	1 cut(s)	1627
MspCI	CTTAAG	1 cut(s)	925
MspI	CCGG	3 cut(s)	170, 301, 1274
MspR9I	CCNGG	9 cut(s)	301, 302, 513, 624, 795, 947, 1071, 1299, 1734
MunI	CAATTG	1 cut(s)	203
Mva1269I	GAATGC	1 cut(s)	564
MvaI	CCWGG	7 cut(s)	513, 624, 795, 947, 1071, 1299, 1734
MvnI	CGCG	1 cut(s)	74
MwoI	GCNNNNNNNGC	9 cut(s)	170, 730, 820, 1098, 1166, 1313, 1633, 1662, 1671
NciI	CCSGG	2 cut(s)	301, 302
NdeI	CATATG	2 cut(s)	841, 934
NdeII	GATC	4 cut(s)	6, 674, 829, 1638
NheI	GCTAGC	1 cut(s)	1156
NlaIII	CATG	8 cut(s)	13, 401, 728, 868, 1156, 1367, 1490, 1496
NlaIV	GGNNCC	2 cut(s)	168, 1524
NmuCI	GTSAC	4 cut(s)	342, 646, 949, 1572
NsiI	ATGCAT	1 cut(s)	403
NspI	RCATGY	2 cut(s)	728, 1156
NspV	TTCGAA	1 cut(s)	568
PaeI	GCATGC	2 cut(s)	728, 1156
PagI	TCATGA	1 cut(s)	1486
PcsI	WCGNNNNNNNCGW	2 cut(s)	71, 1267
PctI	GAATGC	1 cut(s)	564
PdmI	GAANNNNTTC	1 cut(s)	615
PfeI	GAWTC	4 cut(s)	394, 542, 753, 805
PkrI	GCNGC	6 cut(s)	57, 187, 411, 523, 1162, 1348
PleI	GAGTC	3 cut(s)	139, 349, 1579
PmaCI	CACGTG	1 cut(s)	1592
PmlI	CACGTG	1 cut(s)	1592
PpsI	GAGTC	3 cut(s)	139, 349, 1579
Ppu21I	YACGTR	1 cut(s)	1592
PpuMI	RGGWCCY	1 cut(s)	1522
Psp5II	RGGWCCY	1 cut(s)	1522
Psp6I	CCWGG	7 cut(s)	511, 622, 793, 945, 1069, 1297, 1732
PspCI	CACGTG	1 cut(s)	1592
PspGI	CCWGG	7 cut(s)	511, 622, 793, 945, 1069, 1297, 1732
PspN4I	GGNNCC	2 cut(s)	168, 1524
PspPI	GGNCC	4 cut(s)	167, 822, 1522, 1730
PspPPI	RGGWCCY	1 cut(s)	1522
PstI	CTGCAG	1 cut(s)	116
PstNI	CAGNNNCTG	1 cut(s)	800
PvuII	CAGCTG	1 cut(s)	1627
RsaI	GTAC	4 cut(s)	47, 465, 860, 1113
RsaNI	GTAC	4 cut(s)	46, 464, 859, 1112
RseI	CAYNNNNRTG	1 cut(s)	1491
SaqAI	TTAA	8 cut(s)	423, 452, 926, 1106, 1122, 1223, 1352, 1416
SatI	GCNGC	6 cut(s)	56, 186, 410, 522, 1161, 1347
Sau3AI	GATC	4 cut(s)	6, 674, 829, 1638
Sau96I	GGNCC	4 cut(s)	167, 822, 1522, 1730
SchI	GAGTC	3 cut(s)	140, 350, 1580
ScrFI	CCNGG	9 cut(s)	301, 302, 513, 624, 795, 947, 1071, 1299, 1734
SduI	GDGCHC	4 cut(s)	271, 307, 1021, 1261
SexAI	ACCWGGT	1 cut(s)	793
SfaNI	GCATC	5 cut(s)	742, 973, 1079, 1178, 1207
SfcI	CTRYAG	1 cut(s)	112
SfuI	TTCGAA	1 cut(s)	568
SinI	GGWCC	3 cut(s)	167, 1522, 1730
SmaI	CCCGGG	1 cut(s)	302
SmiMI	CAYNNNNRTG	1 cut(s)	1491
SmlI	CTYRAG	3 cut(s)	709, 925, 1195
SmoI	CTYRAG	3 cut(s)	709, 925, 1195
SphI	GCATGC	2 cut(s)	728, 1156
SsiI	CCGC	7 cut(s)	55, 72, 122, 164, 185, 643, 1163
SspMI	CTAG	5 cut(s)	525, 656, 989, 1157, 1563
StyD4I	CCNGG	9 cut(s)	299, 300, 511, 622, 793, 945, 1069, 1297, 1732
StyI	CCWWGG	1 cut(s)	825
TaaI	ACNGT	5 cut(s)	355, 556, 1003, 1409, 1704
TaiI	ACGT	2 cut(s)	150, 1594
TaqI	TCGA	4 cut(s)	5, 38, 568, 670
TauI	GCSGC	2 cut(s)	58, 188
TfiI	GAWTC	4 cut(s)	394, 542, 753, 805
Tru1I	TTAA	8 cut(s)	423, 452, 926, 1106, 1122, 1223, 1352, 1416
Tru9I	TTAA	8 cut(s)	423, 452, 926, 1106, 1122, 1223, 1352, 1416
TscAI	CASTG	6 cut(s)	121, 559, 990, 1412, 1560, 1709
TseFI	GTSAC	4 cut(s)	342, 646, 949, 1572
TseI	GCWGC	4 cut(s)	409, 521, 1160, 1346
Tsp45I	GTSAC	4 cut(s)	342, 646, 949, 1572
TspGWI	ACGGA	1 cut(s)	1276
TspMI	CCCGGG	1 cut(s)	300
TspRI	CASTG	6 cut(s)	121, 559, 990, 1412, 1560, 1709
Vha464I	CTTAAG	1 cut(s)	925
VpaK11BI	GGWCC	3 cut(s)	167, 1522, 1730
XapI	RAATTY	4 cut(s)	40, 613, 941, 1228
XceI	RCATGY	2 cut(s)	728, 1156
XmaI	CCCGGG	1 cut(s)	300
XmnI	GAANNNNTTC	1 cut(s)	615
XspI	CTAG	5 cut(s)	525, 656, 989, 1157, 1563
ZraI	GACGTC	1 cut(s)	148
Zsp2I	ATGCAT	1 cut(s)	403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.