Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009817

Physical Location & Seq

Genomic Coordinates Reverse (-)

20570751 .. 20574587

Gene Structure 3837 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1551 bp

ATGGCAAAACCCAAATACTCCCATCTTTCTCTTATCCATCTCATCATCTCCATCATCATCACTTCATCTCTACCATCACTTGCATCCAACCGTCCCCCACGCTTCCTCGGAAAGTTCTCGCGTTCTTCACCGCCCAATTCTCCGTCACCACTGGAACGACGTCAGCAGCAGAAAAAACTGATCCAATACGAAACCCGATACTTCTCCCAGAATCTCGACCACTTCAGCTTCTCTGAAACCCCGAAATTCCAACAGCGCTACCTCGTCAACGCCGAGCACTGGGTCGGCCCACTACGCCAGGGCCCAATCTTTCTCTACTGCGGCAACGAAGGCGACATCGTATGGTTCGCCGAAAACACCGGCTTCGTCTGGGAACTCGCGCCGCGTTTTGGCGCCATGGTCCTCTTCCCCGAACATCGTTACTATGGAGAGTCAATGCCGTACGGGAGTGAAGAAGAGGCGTACAAGAATGCCACTACGCTGTCGTTTCTTACGGCCGAGCAAGCGCTGGCCGATTTTGCTGTGTTGATCACGGAGCTGAAGCGAGATTGGTCGGCCGAAGGCTGCCCTGTGTTGCTGTTTGGCGGTTCGTATGGCGGAATGTTGGCAGCGTGGATGAGGCTCAAGTATCCCCATATTGCTATCGGTGCACTTGCTTCTTCGGCGCCAATTCTTCAGTTCGAAGATATTGTGCCGACAGAGACGTTTTATGACATTGTCTCCAGTGATTTCAGGCGTGAAAGTAGCAGCTGCTTTAACACTATAAAAGAGTCATGGGATGCATTAATGACCGAGGGTCAGAAACAAAATGGGCTGCACCAGCTGACAAAAACCTTCCATTTATGTGGAGAATTAAAGAGGACAGAAGATCTTGTAGATTGGTTGGAGTCTGCCTATAGTTATTTGGCGATGGTGAACTACCCATATGGGTCGGAATTTATGATGCCTTTGCCCGGACACCCAATTAGAGAGGTTTGCAGAAAGATTGATGGTTGTCCTGATGGGACTAGCACGTTGGAGCGCATATTTGAAGGCATAAGTGTATATCACAATTACAGTGGAAAAGCTGACTGCTTTGAGCTGGAAGATGAATCTGATGTCGGCACAGATGGTTGGAATTGGCAGGCTTGCACAGAAATGGTTATGCCAATGTCTAGTAGCCGGGATAGAAGCATGTTTCAAACATATGATTATAATTTCTCCTCTTTTCAAGAGTGGTGCTGGAAGCAGTTCAATGTGAAACCAAGGCCTACATGGATAACAACAGAGTTTGGTGGACATGATATTAAGGCCACTTTGAAAAACGTCGGAAGTAACATAATCTTCTCCAATGGCTTATTGGATCCATGGAGTGGTGGCAGTGTTCTCCAGAATGTATCTGAATCTATCGTTGCTCTCGTTACTGAAGAAGGTGCTCATCACATAGACTTGCGATTTTCAACTAAAGGGGATCCTGAATGGTTGGTTGAGCAAAGGGAAAGTGAGATTAAGCTGATACAAGGCTGGTTAGATCATTTCTATCAAGAAAAGAAAGCAGCTTTTGACATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001525 GO:0001568 GO:0001944 GO:0003008 GO:0003013 GO:0003073 GO:0003085 GO:0003674 GO:0003824 GO:0004177 GO:0006508 GO:0006807 GO:0006950 GO:0007275 GO:0008015 GO:0008150 GO:0008152 GO:0008217 GO:0008233 GO:0008238 GO:0008239 GO:0009611 GO:0009653 GO:0010594 GO:0010632 GO:0016787 GO:0019538 GO:0030334 GO:0032501 GO:0032502 GO:0032879 GO:0035239 GO:0035295 GO:0040012 GO:0042060 GO:0043170 GO:0043535 GO:0044238 GO:0045776 GO:0048514 GO:0048646 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051239 GO:0051270 GO:0060055 GO:0065007 GO:0065008 GO:0070011 GO:0071704 GO:0072358 GO:0072359 GO:0140096 GO:1901564 GO:2000145

KEGG Pathways

Metabolic & Signaling

ko04614 ko04974 map04614 map04974

Pfam Domains

Protein Families

Peptidase_S28

Protein Analysis

516

Amino Acids

58.94

Weight (kDa)

5.24

Isoelectric Point (pI)

49.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S28	PF05577	70 - 493	3.6e-88	Serine carboxypeptidase S28

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009817)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G65760
fragaria_vesca	FvH4_1g18520 FvH4_1g18520 FvH4_1g18520 FvH4_1g18520 FvH4_1g18520
malus_domestica	MD15G1302800.v1.1
prunus_persica	Prupe.6G213900_v2.0.a1 Prupe.6G213900_v2.0.a1
pyrus_communis	pycom15g26610
rosa_chinensis	RchiOBHm_Chr2g0109161
rosa_laevigata	RLG00000017719
rosa_multiflora	Rmu_co8489283.1_g000001 Rmu_sc0005459.1_g000001
rosa_roxburghii	Rroxscaffold_2G00134450
rosa_rugosa	Rorug02G0157700
rosa_samantha	Rh2AG209700 Rh2BG220100 Rh2CG212200 Rh2DG215800 Rh2DG215900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1194
AatII	GACGTC	1 cut(s)	163
AccB1I	GGYRCC	2 cut(s)	392, 664
AccB7I	CCANNNNNTGG	1 cut(s)	1352
AccII	CGCG	3 cut(s)	121, 380, 385
AciI	CCGC	5 cut(s)	131, 321, 383, 585, 597
AclWI	GGATC	5 cut(s)	175, 1337, 1350, 1445, 1458
AcoI	YGGCCR	3 cut(s)	495, 510, 555
AcsI	RAATTY	2 cut(s)	245, 935
AcuI	CTGAAG	4 cut(s)	208, 560, 659, 1425
AcyI	GRCGYC	3 cut(s)	160, 393, 665
AfaI	GTAC	2 cut(s)	443, 464
AfeI	AGCGCT	2 cut(s)	257, 507
AfiI	CCNNNNNNNGG	4 cut(s)	279, 389, 953, 1352
AflIII	ACRYGT	1 cut(s)	1545
AgsI	TTSAA	6 cut(s)	1031, 1181, 1211, 1234, 1300, 1440
AhdI	GACNNNNNGTC	1 cut(s)	795
AjnI	CCWGG	1 cut(s)	297
AluBI	AGCT	8 cut(s)	228, 538, 750, 823, 1067, 1081, 1492, 1538
AluI	AGCT	8 cut(s)	228, 538, 750, 823, 1067, 1081, 1492, 1538
Alw21I	GWGCWC	3 cut(s)	279, 652, 1417
Alw26I	GTCTC	2 cut(s)	695, 724
Alw44I	GTGCAC	1 cut(s)	648
AlwI	GGATC	5 cut(s)	175, 1337, 1350, 1445, 1458
Aor51HI	AGCGCT	2 cut(s)	257, 507
AoxI	GGCC	7 cut(s)	286, 301, 495, 510, 555, 1247, 1290
ApaI	GGGCCC	1 cut(s)	305
ApaLI	GTGCAC	1 cut(s)	648
ApeKI	GCWGC	7 cut(s)	166, 564, 608, 747, 750, 814, 1535
ApoI	RAATTY	2 cut(s)	245, 935
AseI	ATTAAT	1 cut(s)	785
Asp700I	GAANNNNTTC	1 cut(s)	1229
AspLEI	GCGC	6 cut(s)	258, 382, 395, 508, 667, 1023
AspS9I	GGNCC	4 cut(s)	287, 301, 302, 400
AsuC2I	CCSGG	2 cut(s)	954, 1163
AsuHPI	GGTGA	3 cut(s)	120, 138, 925
AsuII	TTCGAA	1 cut(s)	681
AvaII	GGWCC	1 cut(s)	400
BaeGI	GKGCMC	2 cut(s)	305, 652
BamHI	GGATCC	2 cut(s)	1342, 1450
BanI	GGYRCC	2 cut(s)	392, 664
BanII	GRGCYC	1 cut(s)	305
Bbv12I	GWGCWC	3 cut(s)	279, 652, 1417
BbvI	GCAGC	7 cut(s)	178, 551, 620, 737, 759, 801, 1547
BccI	CCATC	8 cut(s)	30, 45, 59, 82, 904, 983, 995, 1103
BceAI	ACGGC	2 cut(s)	424, 510
BciT130I	CCWGG	1 cut(s)	299
BciVI	GTATCC	1 cut(s)	639
BclI	TGATCA	1 cut(s)	528
BcnI	CCSGG	2 cut(s)	954, 1163
BcoDI	GTCTC	2 cut(s)	695, 724
BfaI	CTAG	2 cut(s)	1008, 1155
BfmI	CTRYAG	1 cut(s)	895
BfoI	RGCGCY	4 cut(s)	259, 396, 509, 668
BfuI	GTATCC	1 cut(s)	639
BglII	AGATCT	1 cut(s)	868
BisI	GCNGC	9 cut(s)	167, 322, 383, 565, 609, 748, 751, 815, 1536
BlsI	GCNGC	9 cut(s)	168, 323, 384, 566, 610, 749, 752, 816, 1537
Bme1390I	CCNGG	3 cut(s)	299, 954, 1163
Bme18I	GGWCC	1 cut(s)	400
BmeRI	GACNNNNNGTC	1 cut(s)	795
BmgT120I	GGNCC	4 cut(s)	287, 301, 302, 400
BmiI	GGNNCC	5 cut(s)	303, 394, 666, 1344, 1452
BmrFI	CCNGG	3 cut(s)	299, 954, 1163
BmrI	ACTGGG	1 cut(s)	289
BmsI	GCATC	3 cut(s)	92, 769, 933
BmuI	ACTGGG	1 cut(s)	289
BpmI	CTGGAG	2 cut(s)	706, 1352
Bpu14I	TTCGAA	1 cut(s)	681
BpuEI	CTTGAG	1 cut(s)	608
BpuMI	CCSGG	2 cut(s)	954, 1163
BsaHI	GRCGYC	3 cut(s)	160, 393, 665
BsaJI	CCNNGG	6 cut(s)	106, 298, 396, 792, 1244, 1346
BsaXI	ACNNNNNCTCC	2 cut(s)	704, 734
Bsc4I	CCNNNNNNNGG	4 cut(s)	279, 389, 953, 1352
Bse118I	RCCGGY	1 cut(s)	359
Bse1I	ACTGG	3 cut(s)	156, 284, 723
BseBI	CCWGG	1 cut(s)	299
BseDI	CCNNGG	6 cut(s)	106, 298, 396, 792, 1244, 1346
BseGI	GGATG	3 cut(s)	83, 621, 784
BseLI	CCNNNNNNNGG	4 cut(s)	279, 389, 953, 1352
BseNI	ACTGG	3 cut(s)	156, 284, 723
BseRI	GAGGAG	1 cut(s)	1192
BseSI	GKGCMC	2 cut(s)	305, 652
BseX3I	CGGCCG	2 cut(s)	495, 555
BseXI	GCAGC	7 cut(s)	178, 551, 620, 737, 759, 801, 1547
BsgI	GTGCAG	1 cut(s)	800
Bsh1236I	CGCG	3 cut(s)	121, 380, 385
Bsh1285I	CGRYCG	2 cut(s)	498, 558
BshFI	GGCC	7 cut(s)	288, 303, 497, 512, 557, 1249, 1292
BshNI	GGYRCC	2 cut(s)	392, 664
BsiEI	CGRYCG	2 cut(s)	498, 558
BsiHKAI	GWGCWC	3 cut(s)	279, 652, 1417
BsiSI	CCGG	3 cut(s)	360, 954, 1162
BsiWI	CGTACG	1 cut(s)	441
BslFI	GGGAC	2 cut(s)	78, 1018
BslI	CCNNNNNNNGG	4 cut(s)	279, 389, 953, 1352
BsmAI	GTCTC	2 cut(s)	695, 724
BsmBI	CGTCTC	1 cut(s)	695
BsmFI	GGGAC	2 cut(s)	78, 1018
BsmI	GAATGC	1 cut(s)	475
BsnI	GGCC	7 cut(s)	288, 303, 497, 512, 557, 1249, 1292
Bsp119I	TTCGAA	1 cut(s)	681
Bsp120I	GGGCCC	1 cut(s)	301
Bsp1286I	GDGCHC	4 cut(s)	279, 305, 652, 1417
Bsp143I	GATC	6 cut(s)	180, 528, 868, 1342, 1450, 1510
Bsp19I	CCATGG	2 cut(s)	396, 1346
BspACI	CCGC	5 cut(s)	131, 321, 383, 585, 597
BspANI	GGCC	7 cut(s)	288, 303, 497, 512, 557, 1249, 1292
BspFNI	CGCG	3 cut(s)	121, 380, 385
BspLI	GGNNCC	5 cut(s)	303, 394, 666, 1344, 1452
BspPI	GGATC	5 cut(s)	175, 1337, 1350, 1445, 1458
BspT104I	TTCGAA	1 cut(s)	681
BspT107I	GGYRCC	2 cut(s)	392, 664
BsrFI	RCCGGY	1 cut(s)	359
BsrI	ACTGG	3 cut(s)	156, 284, 723
BssAI	RCCGGY	1 cut(s)	359
BssECI	CCNNGG	6 cut(s)	106, 298, 396, 792, 1244, 1346
BssMI	GATC	6 cut(s)	180, 528, 868, 1342, 1450, 1510
BssNI	GRCGYC	3 cut(s)	160, 393, 665
BssT1I	CCWWGG	3 cut(s)	396, 1244, 1346
Bst2UI	CCWGG	1 cut(s)	299
Bst4CI	ACNGT	2 cut(s)	92, 1058
Bst6I	CTCTTC	2 cut(s)	410, 450
BstACI	GRCGYC	3 cut(s)	160, 393, 665
BstBI	TTCGAA	1 cut(s)	681
BstC8I	GCNNGC	4 cut(s)	504, 510, 1125, 1129
BstDSI	CCRYGG	2 cut(s)	396, 1346
BstF5I	GGATG	3 cut(s)	83, 621, 784
BstFNI	CGCG	3 cut(s)	121, 380, 385
BstH2I	RGCGCY	4 cut(s)	259, 396, 509, 668
BstHHI	GCGC	6 cut(s)	258, 382, 395, 508, 667, 1023
BstKTI	GATC	6 cut(s)	183, 531, 871, 1345, 1453, 1513
BstMAI	GTCTC	2 cut(s)	695, 724
BstMBI	GATC	6 cut(s)	180, 528, 868, 1342, 1450, 1510
BstMCI	CGRYCG	2 cut(s)	498, 558
BstMWI	GCNNNNNNNGC	7 cut(s)	294, 330, 503, 518, 647, 662, 820
BstNI	CCWGG	1 cut(s)	299
BstNSI	RCATGY	2 cut(s)	1177, 1549
BstSCI	CCNGG	3 cut(s)	297, 952, 1161
BstSFI	CTRYAG	1 cut(s)	895
BstSLI	GKGCMC	2 cut(s)	305, 652
BstUI	CGCG	3 cut(s)	121, 380, 385
BstV1I	GCAGC	7 cut(s)	178, 551, 620, 737, 759, 801, 1547
BstX2I	RGATCY	3 cut(s)	868, 1342, 1450
BstXI	CCANNNNNNTGG	1 cut(s)	845
BstYI	RGATCY	3 cut(s)	868, 1342, 1450
BstZI	CGGCCG	2 cut(s)	495, 555
BsuI	GTATCC	1 cut(s)	639
BsuRI	GGCC	7 cut(s)	288, 303, 497, 512, 557, 1249, 1292
BtgI	CCRYGG	2 cut(s)	396, 1346
BtgZI	GCGATG	1 cut(s)	923
BtsCI	GGATG	3 cut(s)	83, 621, 784
BtsI	GCAGTG	1 cut(s)	1366
BtsIMutI	CAGTG	5 cut(s)	149, 277, 730, 1063, 1366
Cac8I	GCNNGC	4 cut(s)	504, 510, 1125, 1129
CfoI	GCGC	6 cut(s)	258, 382, 395, 508, 667, 1023
Cfr10I	RCCGGY	1 cut(s)	359
Cfr13I	GGNCC	4 cut(s)	287, 301, 302, 400
Csp6I	GTAC	2 cut(s)	442, 463
CspCI	CAANNNNNGTGG	2 cut(s)	1039, 1074
CviAII	CATG	7 cut(s)	397, 774, 1174, 1254, 1280, 1347, 1546
CviQI	GTAC	2 cut(s)	442, 463
DinI	GGCGCC	2 cut(s)	394, 666
DpnI	GATC	6 cut(s)	182, 530, 870, 1344, 1452, 1512
DpnII	GATC	6 cut(s)	180, 528, 868, 1342, 1450, 1510
DriI	GACNNNNNGTC	1 cut(s)	795
EaeI	YGGCCR	3 cut(s)	495, 510, 555
EagI	CGGCCG	2 cut(s)	495, 555
Eam1104I	CTCTTC	2 cut(s)	410, 450
Eam1105I	GACNNNNNGTC	1 cut(s)	795
EarI	CTCTTC	2 cut(s)	410, 450
EciI	GGCGGA	1 cut(s)	612
EclXI	CGGCCG	2 cut(s)	495, 555
Eco130I	CCWWGG	3 cut(s)	396, 1244, 1346
Eco147I	AGGCCT	1 cut(s)	1249
Eco24I	GRGCYC	1 cut(s)	305
Eco47I	GGWCC	1 cut(s)	400
Eco47III	AGCGCT	2 cut(s)	257, 507
Eco52I	CGGCCG	2 cut(s)	495, 555
Eco57I	CTGAAG	4 cut(s)	208, 560, 659, 1425
EcoO109I	RGGNCCY	1 cut(s)	301
EcoRII	CCWGG	1 cut(s)	297
EcoT14I	CCWWGG	3 cut(s)	396, 1244, 1346
EcoT22I	ATGCAT	1 cut(s)	784
EcoT38I	GRGCYC	1 cut(s)	305
EgeI	GGCGCC	2 cut(s)	394, 666
EheI	GGCGCC	2 cut(s)	394, 666
ErhI	CCWWGG	3 cut(s)	396, 1244, 1346
Esp3I	CGTCTC	1 cut(s)	695
FaeI	CATG	7 cut(s)	400, 777, 1177, 1257, 1283, 1350, 1549
FaqI	GGGAC	2 cut(s)	78, 1018
FatI	CATG	7 cut(s)	396, 773, 1173, 1253, 1279, 1346, 1545
FauNDI	CATATG	2 cut(s)	925, 1186
FbaI	TGATCA	1 cut(s)	528
Fnu4HI	GCNGC	9 cut(s)	167, 322, 383, 565, 609, 748, 751, 815, 1536
FokI	GGATG	3 cut(s)	70, 628, 791
FriOI	GRGCYC	1 cut(s)	305
Fsp4HI	GCNGC	9 cut(s)	167, 322, 383, 565, 609, 748, 751, 815, 1536
FspBI	CTAG	2 cut(s)	1008, 1155
GlaI	GCGC	6 cut(s)	257, 381, 394, 507, 666, 1022
GluI	GCNGC	9 cut(s)	167, 322, 383, 565, 609, 748, 751, 815, 1536
GsuI	CTGGAG	2 cut(s)	706, 1352
HaeII	RGCGCY	4 cut(s)	259, 396, 509, 668
HaeIII	GGCC	7 cut(s)	288, 303, 497, 512, 557, 1249, 1292
HapII	CCGG	3 cut(s)	360, 954, 1162
HhaI	GCGC	6 cut(s)	258, 382, 395, 508, 667, 1023
Hin1I	GRCGYC	3 cut(s)	160, 393, 665
Hin1II	CATG	7 cut(s)	400, 777, 1177, 1257, 1283, 1350, 1549
Hin6I	GCGC	6 cut(s)	256, 380, 393, 506, 665, 1021
HinP1I	GCGC	6 cut(s)	256, 380, 393, 506, 665, 1021
HincII	GTYRAC	1 cut(s)	268
HindII	GTYRAC	1 cut(s)	268
HinfI	GANTC	6 cut(s)	211, 431, 770, 887, 1091, 1382
HpaII	CCGG	3 cut(s)	360, 954, 1162
HphI	GGTGA	3 cut(s)	120, 138, 925
Hpy166II	GTNNAC	4 cut(s)	268, 650, 916, 1277
Hpy188I	TCNGA	7 cut(s)	110, 235, 801, 934, 1096, 1310, 1381
Hpy188III	TCNNGA	6 cut(s)	215, 998, 1211, 1369, 1454, 1523
Hpy8I	GTNNAC	4 cut(s)	268, 650, 916, 1277
Hpy99I	CGWCG	2 cut(s)	162, 1310
HpyAV	CCTTC	5 cut(s)	323, 554, 844, 1025, 1403
HpyCH4III	ACNGT	2 cut(s)	92, 1058
HpyCH4IV	ACGT	4 cut(s)	160, 704, 1013, 1305
HpyCH4V	TGCA	6 cut(s)	83, 650, 782, 817, 978, 1131
HpyF10VI	GCNNNNNNNGC	7 cut(s)	294, 330, 503, 518, 647, 662, 820
HpySE526I	ACGT	4 cut(s)	160, 704, 1013, 1305
Hsp92I	GRCGYC	3 cut(s)	160, 393, 665
Hsp92II	CATG	7 cut(s)	400, 777, 1177, 1257, 1283, 1350, 1549
HspAI	GCGC	6 cut(s)	256, 380, 393, 506, 665, 1021
KasI	GGCGCC	2 cut(s)	392, 664
Ksp22I	TGATCA	1 cut(s)	528
Kzo9I	GATC	6 cut(s)	180, 528, 868, 1342, 1450, 1510
LmnI	GCTCC	2 cut(s)	535, 1018
Lsp1109I	GCAGC	7 cut(s)	178, 551, 620, 737, 759, 801, 1547
LweI	GCATC	3 cut(s)	92, 769, 933
MaeI	CTAG	2 cut(s)	1008, 1155
MaeII	ACGT	4 cut(s)	160, 704, 1013, 1305
MaeIII	GTNAC	4 cut(s)	144, 419, 1313, 1399
MalI	GATC	6 cut(s)	182, 530, 870, 1344, 1452, 1512
MboI	GATC	6 cut(s)	180, 528, 868, 1342, 1450, 1510
MflI	RGATCY	3 cut(s)	868, 1342, 1450
MhlI	GDGCHC	4 cut(s)	279, 305, 652, 1417
MluCI	AATT	9 cut(s)	136, 245, 669, 851, 935, 963, 1051, 1117, 1195
Mly113I	GGCGCC	2 cut(s)	393, 665
MlyI	GAGTC	3 cut(s)	440, 779, 896
MmeI	TCCRAC	7 cut(s)	111, 274, 864, 912, 996, 1094, 1288
MnlI	CCTC	9 cut(s)	116, 272, 413, 451, 612, 787, 852, 964, 1213
Mph1103I	ATGCAT	1 cut(s)	784
MroXI	GAANNNNTTC	1 cut(s)	1229
MseI	TTAA	5 cut(s)	756, 785, 854, 1287, 1488
MslI	CAYNNNNRTG	2 cut(s)	843, 1136
MspA1I	CMGCKG	2 cut(s)	750, 823
MspI	CCGG	3 cut(s)	360, 954, 1162
MspR9I	CCNGG	3 cut(s)	299, 954, 1163
Mva1269I	GAATGC	1 cut(s)	475
MvaI	CCWGG	1 cut(s)	299
MvnI	CGCG	3 cut(s)	121, 380, 385
MwoI	GCNNNNNNNGC	7 cut(s)	294, 330, 503, 518, 647, 662, 820
NarI	GGCGCC	2 cut(s)	393, 665
NciI	CCSGG	2 cut(s)	954, 1163
NcoI	CCATGG	2 cut(s)	396, 1346
NdeI	CATATG	2 cut(s)	925, 1186
NdeII	GATC	6 cut(s)	180, 528, 868, 1342, 1450, 1510
NlaIII	CATG	7 cut(s)	400, 777, 1177, 1257, 1283, 1350, 1549
NlaIV	GGNNCC	5 cut(s)	303, 394, 666, 1344, 1452
NmeAIII	GCCGAG	2 cut(s)	298, 523
NmuCI	GTSAC	1 cut(s)	144
NsiI	ATGCAT	1 cut(s)	784
NspI	RCATGY	2 cut(s)	1177, 1549
NspV	TTCGAA	1 cut(s)	681
PceI	AGGCCT	1 cut(s)	1249
PciI	ACATGT	1 cut(s)	1545
PcsI	WCGNNNNNNNCGW	2 cut(s)	270, 1395
PctI	GAATGC	1 cut(s)	475
PdmI	GAANNNNTTC	1 cut(s)	1229
PfeI	GAWTC	3 cut(s)	211, 1091, 1382
Pfl23II	CGTACG	1 cut(s)	441
PflFI	GACNNNGTC	1 cut(s)	716
PflMI	CCANNNNNTGG	1 cut(s)	1352
PkrI	GCNGC	9 cut(s)	168, 323, 384, 566, 610, 749, 752, 816, 1537
PleI	GAGTC	3 cut(s)	439, 778, 895
PluTI	GGCGCC	2 cut(s)	396, 668
PpsI	GAGTC	3 cut(s)	439, 778, 895
PscI	ACATGT	1 cut(s)	1545
PshBI	ATTAAT	1 cut(s)	785
PsiI	TTATAA	1 cut(s)	1194
Psp6I	CCWGG	1 cut(s)	297
PspGI	CCWGG	1 cut(s)	297
PspLI	CGTACG	1 cut(s)	441
PspN4I	GGNNCC	5 cut(s)	303, 394, 666, 1344, 1452
PspOMI	GGGCCC	1 cut(s)	301
PspPI	GGNCC	4 cut(s)	287, 301, 302, 400
PsuI	RGATCY	3 cut(s)	868, 1342, 1450
PsyI	GACNNNGTC	1 cut(s)	716
PvuII	CAGCTG	2 cut(s)	750, 823
RsaI	GTAC	2 cut(s)	443, 464
RsaNI	GTAC	2 cut(s)	442, 463
RseI	CAYNNNNRTG	2 cut(s)	843, 1136
SaqAI	TTAA	5 cut(s)	756, 785, 854, 1287, 1488
SatI	GCNGC	9 cut(s)	167, 322, 383, 565, 609, 748, 751, 815, 1536
Sau3AI	GATC	6 cut(s)	180, 528, 868, 1342, 1450, 1510
Sau96I	GGNCC	4 cut(s)	287, 301, 302, 400
SchI	GAGTC	3 cut(s)	440, 779, 896
ScrFI	CCNGG	3 cut(s)	299, 954, 1163
SduI	GDGCHC	4 cut(s)	279, 305, 652, 1417
SfaNI	GCATC	3 cut(s)	92, 769, 933
SfcI	CTRYAG	1 cut(s)	895
SfoI	GGCGCC	2 cut(s)	394, 666
SfuI	TTCGAA	1 cut(s)	681
SinI	GGWCC	1 cut(s)	400
SmiMI	CAYNNNNRTG	2 cut(s)	843, 1136
SmlI	CTYRAG	1 cut(s)	623
SmoI	CTYRAG	1 cut(s)	623
Sse9I	AATT	9 cut(s)	136, 245, 669, 851, 935, 963, 1051, 1117, 1195
SseBI	AGGCCT	1 cut(s)	1249
SsiI	CCGC	5 cut(s)	131, 321, 383, 585, 597
SspDI	GGCGCC	2 cut(s)	392, 664
SspMI	CTAG	2 cut(s)	1008, 1155
StuI	AGGCCT	1 cut(s)	1249
StyD4I	CCNGG	3 cut(s)	297, 952, 1161
StyI	CCWWGG	3 cut(s)	396, 1244, 1346
TaaI	ACNGT	2 cut(s)	92, 1058
TaiI	ACGT	4 cut(s)	163, 707, 1016, 1308
TaqI	TCGA	2 cut(s)	216, 681
TaqII	GACCGA	1 cut(s)	806
TasI	AATT	9 cut(s)	136, 245, 669, 851, 935, 963, 1051, 1117, 1195
TauI	GCSGC	2 cut(s)	324, 385
TfiI	GAWTC	3 cut(s)	211, 1091, 1382
Tru1I	TTAA	5 cut(s)	756, 785, 854, 1287, 1488
Tru9I	TTAA	5 cut(s)	756, 785, 854, 1287, 1488
TscAI	CASTG	5 cut(s)	156, 284, 730, 1063, 1366
TseFI	GTSAC	1 cut(s)	144
TseI	GCWGC	7 cut(s)	166, 564, 608, 747, 750, 814, 1535
Tsp45I	GTSAC	1 cut(s)	144
TspDTI	ATGAA	2 cut(s)	54, 1104
TspGWI	ACGGA	2 cut(s)	132, 548
TspRI	CASTG	5 cut(s)	156, 284, 730, 1063, 1366
Tth111I	GACNNNGTC	1 cut(s)	716
Van91I	CCANNNNNTGG	1 cut(s)	1352
VneI	GTGCAC	1 cut(s)	648
VpaK11BI	GGWCC	1 cut(s)	400
VspI	ATTAAT	1 cut(s)	785
XapI	RAATTY	2 cut(s)	245, 935
XceI	RCATGY	2 cut(s)	1177, 1549
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1251, 1336
XmnI	GAANNNNTTC	1 cut(s)	1229
XspI	CTAG	2 cut(s)	1008, 1155
ZraI	GACGTC	1 cut(s)	161
Zsp2I	ATGCAT	1 cut(s)	784

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.