MADS-box transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G22630 AT2G22630 AT4G37940 AT4G37940 AT4G37940 AT4G37940 |
| fragaria_vesca | FvH4_1g19110 FvH4_1g19110 |
| malus_domestica | MD01G1043900.v1.1 MD15G1307400.v1.1 |
| prunus_persica | Prupe.6G208900_v2.0.a1 |
| pyrus_communis | pycom01g07090 |
| rosa_chinensis | RchiOBHm_Chr2g0110101 |
| rosa_laevigata | RLG00000017789 |
| rosa_roxburghii | Rroxscaffold_2G00133720 |
| rosa_rugosa | Rorug02G0165700 |
| rosa_samantha | Rh2AG217500 Rh2BG227700 Rh2CG219700 Rh2DG223300 |
| rosa_wichuraiana | Rw2G016810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 488, 542 |
| AclWI | GGATC | 1 cut(s) | 16 |
| AcsI | RAATTY | 3 cut(s) | 318, 337, 490 |
| AfaI | GTAC | 2 cut(s) | 43, 368 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 198, 199 |
| AgsI | TTSAA | 1 cut(s) | 395 |
| AluBI | AGCT | 3 cut(s) | 160, 253, 277 |
| AluI | AGCT | 3 cut(s) | 160, 253, 277 |
| AlwI | GGATC | 1 cut(s) | 16 |
| AoxI | GGCC | 1 cut(s) | 545 |
| ApoI | RAATTY | 3 cut(s) | 318, 337, 490 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 514, 546 |
| AsuHPI | GGTGA | 1 cut(s) | 181 |
| BccI | CCATC | 2 cut(s) | 457, 487 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 302, 336 |
| BfaI | CTAG | 2 cut(s) | 147, 287 |
| BfmI | CTRYAG | 2 cut(s) | 209, 311 |
| BmrI | ACTGGG | 1 cut(s) | 162 |
| BmsI | GCATC | 1 cut(s) | 109 |
| BmuI | ACTGGG | 1 cut(s) | 162 |
| BsaBI | GATNNNNATC | 1 cut(s) | 20 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 198, 199 |
| Bse118I | RCCGGY | 1 cut(s) | 231 |
| Bse1I | ACTGG | 1 cut(s) | 157 |
| Bse8I | GATNNNNATC | 1 cut(s) | 20 |
| BseGI | GGATG | 1 cut(s) | 516 |
| BseJI | GATNNNNATC | 1 cut(s) | 20 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 198, 199 |
| BseMII | CTCAG | 1 cut(s) | 400 |
| BseNI | ACTGG | 1 cut(s) | 157 |
| BshFI | GGCC | 1 cut(s) | 547 |
| BsiSI | CCGG | 1 cut(s) | 232 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 198, 199 |
| BsnI | GGCC | 1 cut(s) | 547 |
| Bsp1407I | TGTACA | 1 cut(s) | 366 |
| Bsp143I | GATC | 3 cut(s) | 15, 21, 138 |
| BspANI | GGCC | 1 cut(s) | 547 |
| BspCNI | CTCAG | 1 cut(s) | 399 |
| BspMAI | CTGCAG | 1 cut(s) | 315 |
| BspPI | GGATC | 1 cut(s) | 16 |
| BsrFI | RCCGGY | 1 cut(s) | 231 |
| BsrGI | TGTACA | 1 cut(s) | 366 |
| BsrI | ACTGG | 1 cut(s) | 157 |
| BssAI | RCCGGY | 1 cut(s) | 231 |
| BssMI | GATC | 3 cut(s) | 15, 21, 138 |
| Bst4CI | ACNGT | 2 cut(s) | 366, 530 |
| BstAUI | TGTACA | 1 cut(s) | 366 |
| BstC8I | GCNNGC | 1 cut(s) | 50 |
| BstDEI | CTNAG | 1 cut(s) | 386 |
| BstF5I | GGATG | 1 cut(s) | 516 |
| BstKTI | GATC | 3 cut(s) | 18, 24, 141 |
| BstMBI | GATC | 3 cut(s) | 15, 21, 138 |
| BstNSI | RCATGY | 1 cut(s) | 450 |
| BstSFI | CTRYAG | 2 cut(s) | 209, 311 |
| BsuRI | GGCC | 1 cut(s) | 547 |
| BtgZI | GCGATG | 1 cut(s) | 132 |
| BtsCI | GGATG | 1 cut(s) | 516 |
| BtsIMutI | CAGTG | 1 cut(s) | 150 |
| Cac8I | GCNNGC | 1 cut(s) | 50 |
| Cfr10I | RCCGGY | 1 cut(s) | 231 |
| Csp6I | GTAC | 2 cut(s) | 42, 367 |
| CviAII | CATG | 2 cut(s) | 241, 447 |
| CviJI | RGCY | 4 cut(s) | 160, 253, 277, 547 |
| CviKI_1 | RGCY | 4 cut(s) | 160, 253, 277, 547 |
| CviQI | GTAC | 2 cut(s) | 42, 367 |
| DdeI | CTNAG | 1 cut(s) | 386 |
| DpnI | GATC | 3 cut(s) | 17, 23, 140 |
| DpnII | GATC | 3 cut(s) | 15, 21, 138 |
| Eco147I | AGGCCT | 1 cut(s) | 547 |
| EcoRI | GAATTC | 1 cut(s) | 318 |
| FaeI | CATG | 2 cut(s) | 244, 450 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 117, 149 |
| FatI | CATG | 2 cut(s) | 240, 446 |
| FokI | GGATG | 1 cut(s) | 503 |
| FspBI | CTAG | 2 cut(s) | 147, 287 |
| HaeIII | GGCC | 1 cut(s) | 547 |
| HapII | CCGG | 1 cut(s) | 232 |
| Hin1II | CATG | 2 cut(s) | 244, 450 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 1 cut(s) | 475 |
| HpaII | CCGG | 1 cut(s) | 232 |
| HphI | GGTGA | 1 cut(s) | 181 |
| Hpy188I | TCNGA | 3 cut(s) | 26, 138, 327 |
| Hpy188III | TCNNGA | 4 cut(s) | 19, 287, 395, 533 |
| HpyAV | CCTTC | 5 cut(s) | 21, 70, 85, 91, 367 |
| HpyCH4III | ACNGT | 2 cut(s) | 366, 530 |
| HpyCH4V | TGCA | 4 cut(s) | 122, 173, 313, 450 |
| HpyF3I | CTNAG | 1 cut(s) | 386 |
| Hsp92II | CATG | 2 cut(s) | 244, 450 |
| Kzo9I | GATC | 3 cut(s) | 15, 21, 138 |
| LmnI | GCTCC | 1 cut(s) | 202 |
| LpnPI | CCDG | 5 cut(s) | 34, 138, 166, 245, 299 |
| LweI | GCATC | 1 cut(s) | 109 |
| MaeI | CTAG | 2 cut(s) | 147, 287 |
| MaeIII | GTNAC | 3 cut(s) | 55, 176, 187 |
| MalI | GATC | 3 cut(s) | 17, 23, 140 |
| MboI | GATC | 3 cut(s) | 15, 21, 138 |
| MboII | GAAGA | 5 cut(s) | 18, 25, 133, 427, 430 |
| MmeI | TCCRAC | 1 cut(s) | 109 |
| MnlI | CCTC | 3 cut(s) | 203, 395, 558 |
| MseI | TTAA | 4 cut(s) | 87, 263, 410, 470 |
| MspI | CCGG | 1 cut(s) | 232 |
| NdeII | GATC | 3 cut(s) | 15, 21, 138 |
| NlaIII | CATG | 2 cut(s) | 244, 450 |
| NmuCI | GTSAC | 2 cut(s) | 55, 187 |
| NspI | RCATGY | 1 cut(s) | 450 |
| PceI | AGGCCT | 1 cut(s) | 547 |
| PfeI | GAWTC | 1 cut(s) | 475 |
| PsiI | TTATAA | 2 cut(s) | 488, 542 |
| PstI | CTGCAG | 1 cut(s) | 315 |
| RsaI | GTAC | 2 cut(s) | 43, 368 |
| RsaNI | GTAC | 2 cut(s) | 42, 367 |
| SaqAI | TTAA | 4 cut(s) | 87, 263, 410, 470 |
| Sau3AI | GATC | 3 cut(s) | 15, 21, 138 |
| SetI | ASST | 6 cut(s) | 162, 255, 279, 378, 387, 558 |
| SfaNI | GCATC | 1 cut(s) | 109 |
| SfcI | CTRYAG | 2 cut(s) | 209, 311 |
| SseBI | AGGCCT | 1 cut(s) | 547 |
| SspMI | CTAG | 2 cut(s) | 147, 287 |
| StuI | AGGCCT | 1 cut(s) | 547 |
| TaaI | ACNGT | 2 cut(s) | 366, 530 |
| TatI | WGTACW | 1 cut(s) | 366 |
| TfiI | GAWTC | 1 cut(s) | 475 |
| Tru1I | TTAA | 4 cut(s) | 87, 263, 410, 470 |
| Tru9I | TTAA | 4 cut(s) | 87, 263, 410, 470 |
| TscAI | CASTG | 1 cut(s) | 157 |
| TseFI | GTSAC | 2 cut(s) | 55, 187 |
| Tsp45I | GTSAC | 2 cut(s) | 55, 187 |
| TspDTI | ATGAA | 4 cut(s) | 180, 229, 335, 494 |
| TspGWI | ACGGA | 1 cut(s) | 513 |
| TspRI | CASTG | 1 cut(s) | 157 |
| XapI | RAATTY | 3 cut(s) | 318, 337, 490 |
| XbaI | TCTAGA | 1 cut(s) | 286 |
| XceI | RCATGY | 1 cut(s) | 450 |
| XspI | CTAG | 2 cut(s) | 147, 287 |