Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0120821 RchiOBHm_Chr3g0468231 RchiOBHm_Chr3g0481101 RchiOBHm_Chr5g0015941 RchiOBHm_Chr5g0049911 RchiOBHm_Chr6g0272371 RchiOBHm_Chr6g0285951 RchiOBHm_Chr7g0229731 RchiOBHm_Chr7g0242881 |
| rosa_laevigata | RLG00000010346 RLG00000025577 |
| rosa_multiflora | Rmu_sc0000181.1_g000006 Rmu_sc0006492.1_g000024 |
| rosa_roxburghii | Rroxscaffold_3G00275980 Rroxscaffold_5G00376450 Rroxscaffold_7G00178630 |
| rosa_samantha | Rh5AG266800 Rh6CG292600 Rh6DG284700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 18 |
| AcsI | RAATTY | 1 cut(s) | 101 |
| AgsI | TTSAA | 1 cut(s) | 218 |
| AjuI | GAANNNNNNNTTGG | 3 cut(s) | 189, 221, 459 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 276, 308, 432, 464 |
| AluBI | AGCT | 1 cut(s) | 221 |
| AluI | AGCT | 1 cut(s) | 221 |
| ApeKI | GCWGC | 1 cut(s) | 166 |
| ApoI | RAATTY | 1 cut(s) | 101 |
| AsuHPI | GGTGA | 2 cut(s) | 158, 272 |
| BauI | CACGAG | 1 cut(s) | 171 |
| BbvI | GCAGC | 1 cut(s) | 178 |
| BccI | CCATC | 2 cut(s) | 136, 307 |
| BfaI | CTAG | 1 cut(s) | 222 |
| BisI | GCNGC | 1 cut(s) | 167 |
| BlsI | GCNGC | 1 cut(s) | 168 |
| BmsI | GCATC | 2 cut(s) | 70, 378 |
| BsaJI | CCNNGG | 1 cut(s) | 277 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 276, 306 |
| BseDI | CCNNGG | 1 cut(s) | 277 |
| BseGI | GGATG | 1 cut(s) | 85 |
| BseMII | CTCAG | 1 cut(s) | 122 |
| BseRI | GAGGAG | 1 cut(s) | 297 |
| BseXI | GCAGC | 1 cut(s) | 178 |
| BspACI | CCGC | 1 cut(s) | 18 |
| BspCNI | CTCAG | 1 cut(s) | 121 |
| BssECI | CCNNGG | 1 cut(s) | 277 |
| BssSI | CACGAG | 1 cut(s) | 171 |
| BssT1I | CCWWGG | 1 cut(s) | 277 |
| Bst2BI | CACGAG | 1 cut(s) | 171 |
| Bst4CI | ACNGT | 3 cut(s) | 31, 59, 235 |
| Bst6I | CTCTTC | 1 cut(s) | 48 |
| BstDEI | CTNAG | 1 cut(s) | 108 |
| BstEII | GGTNACC | 1 cut(s) | 460 |
| BstF5I | GGATG | 1 cut(s) | 85 |
| BstPI | GGTNACC | 1 cut(s) | 460 |
| BstV1I | GCAGC | 1 cut(s) | 178 |
| BtsCI | GGATG | 1 cut(s) | 85 |
| BtsIMutI | CAGTG | 2 cut(s) | 27, 231 |
| CviAII | CATG | 4 cut(s) | 14, 129, 158, 296 |
| CviJI | RGCY | 4 cut(s) | 169, 221, 254, 300 |
| CviKI_1 | RGCY | 4 cut(s) | 169, 221, 254, 300 |
| DdeI | CTNAG | 1 cut(s) | 108 |
| DraI | TTTAAA | 1 cut(s) | 382 |
| Eam1104I | CTCTTC | 1 cut(s) | 48 |
| EarI | CTCTTC | 1 cut(s) | 48 |
| EciI | GGCGGA | 1 cut(s) | 33 |
| Eco130I | CCWWGG | 1 cut(s) | 277 |
| Eco91I | GGTNACC | 1 cut(s) | 460 |
| EcoO65I | GGTNACC | 1 cut(s) | 460 |
| EcoT14I | CCWWGG | 1 cut(s) | 277 |
| ErhI | CCWWGG | 1 cut(s) | 277 |
| FaeI | CATG | 4 cut(s) | 17, 132, 161, 299 |
| FaiI | YATR | 5 cut(s) | 15, 130, 159, 297, 327 |
| FatI | CATG | 4 cut(s) | 13, 128, 157, 295 |
| Fnu4HI | GCNGC | 1 cut(s) | 167 |
| FokI | GGATG | 1 cut(s) | 92 |
| Fsp4HI | GCNGC | 1 cut(s) | 167 |
| FspBI | CTAG | 1 cut(s) | 222 |
| GluI | GCNGC | 1 cut(s) | 167 |
| Hin1II | CATG | 4 cut(s) | 17, 132, 161, 299 |
| HphI | GGTGA | 2 cut(s) | 158, 272 |
| Hpy166II | GTNNAC | 1 cut(s) | 184 |
| Hpy188I | TCNGA | 1 cut(s) | 111 |
| Hpy8I | GTNNAC | 1 cut(s) | 184 |
| HpyAV | CCTTC | 1 cut(s) | 164 |
| HpyCH4III | ACNGT | 3 cut(s) | 31, 59, 235 |
| HpyCH4IV | ACGT | 2 cut(s) | 375, 470 |
| HpyCH4V | TGCA | 4 cut(s) | 49, 204, 306, 391 |
| HpyF3I | CTNAG | 1 cut(s) | 108 |
| HpySE526I | ACGT | 2 cut(s) | 375, 470 |
| Hsp92II | CATG | 4 cut(s) | 17, 132, 161, 299 |
| Lsp1109I | GCAGC | 1 cut(s) | 178 |
| LweI | GCATC | 2 cut(s) | 70, 378 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MaeII | ACGT | 2 cut(s) | 375, 470 |
| MaeIII | GTNAC | 3 cut(s) | 53, 272, 460 |
| MboII | GAAGA | 2 cut(s) | 35, 453 |
| MluCI | AATT | 5 cut(s) | 72, 101, 115, 383, 432 |
| MnlI | CCTC | 5 cut(s) | 70, 117, 180, 275, 357 |
| MseI | TTAA | 4 cut(s) | 192, 309, 381, 411 |
| MslI | CAYNNNNRTG | 1 cut(s) | 311 |
| NlaIII | CATG | 4 cut(s) | 17, 132, 161, 299 |
| PkrI | GCNGC | 1 cut(s) | 168 |
| PspEI | GGTNACC | 1 cut(s) | 460 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 219, 251 |
| RseI | CAYNNNNRTG | 1 cut(s) | 311 |
| SaqAI | TTAA | 4 cut(s) | 192, 309, 381, 411 |
| SatI | GCNGC | 1 cut(s) | 167 |
| SetI | ASST | 6 cut(s) | 8, 156, 223, 279, 378, 473 |
| SfaNI | GCATC | 2 cut(s) | 70, 378 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 311 |
| Sse9I | AATT | 5 cut(s) | 72, 101, 115, 383, 432 |
| SsiI | CCGC | 1 cut(s) | 18 |
| SspMI | CTAG | 1 cut(s) | 222 |
| StyI | CCWWGG | 1 cut(s) | 277 |
| TaaI | ACNGT | 3 cut(s) | 31, 59, 235 |
| TaiI | ACGT | 2 cut(s) | 378, 473 |
| TaqI | TCGA | 1 cut(s) | 96 |
| TasI | AATT | 5 cut(s) | 72, 101, 115, 383, 432 |
| Tru1I | TTAA | 4 cut(s) | 192, 309, 381, 411 |
| Tru9I | TTAA | 4 cut(s) | 192, 309, 381, 411 |
| TscAI | CASTG | 2 cut(s) | 34, 238 |
| TseI | GCWGC | 1 cut(s) | 166 |
| TspDTI | ATGAA | 4 cut(s) | 114, 117, 146, 284 |
| TspRI | CASTG | 2 cut(s) | 34, 238 |
| XapI | RAATTY | 1 cut(s) | 101 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 262 |
| XspI | CTAG | 1 cut(s) | 222 |