Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0120821 RchiOBHm_Chr3g0468231 RchiOBHm_Chr3g0481101 RchiOBHm_Chr5g0015941 RchiOBHm_Chr5g0049911 RchiOBHm_Chr6g0272371 RchiOBHm_Chr6g0285951 RchiOBHm_Chr7g0229731 RchiOBHm_Chr7g0242881 |
| rosa_laevigata | RLG00000010346 RLG00000025577 |
| rosa_multiflora | Rmu_sc0000181.1_g000006 Rmu_sc0006492.1_g000024 |
| rosa_roxburghii | Rroxscaffold_3G00275980 Rroxscaffold_5G00376450 Rroxscaffold_7G00178630 |
| rosa_samantha | Rh5AG266800 Rh6CG292600 Rh6DG284700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 166 |
| AciI | CCGC | 2 cut(s) | 18, 166 |
| AcsI | RAATTY | 1 cut(s) | 101 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 260 |
| AgsI | TTSAA | 2 cut(s) | 218, 259 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 189, 221 |
| AluBI | AGCT | 1 cut(s) | 221 |
| AluI | AGCT | 1 cut(s) | 221 |
| AoxI | GGCC | 1 cut(s) | 167 |
| ApoI | RAATTY | 1 cut(s) | 101 |
| AspS9I | GGNCC | 1 cut(s) | 6 |
| AsuC2I | CCSGG | 1 cut(s) | 10 |
| AsuHPI | GGTGA | 2 cut(s) | 19, 158 |
| AvaII | GGWCC | 1 cut(s) | 6 |
| BauI | CACGAG | 1 cut(s) | 171 |
| BccI | CCATC | 1 cut(s) | 136 |
| BcnI | CCSGG | 1 cut(s) | 10 |
| BfaI | CTAG | 1 cut(s) | 222 |
| BisI | GCNGC | 1 cut(s) | 167 |
| BlsI | GCNGC | 1 cut(s) | 168 |
| Bme1390I | CCNGG | 1 cut(s) | 10 |
| Bme18I | GGWCC | 1 cut(s) | 6 |
| BmgT120I | GGNCC | 1 cut(s) | 6 |
| BmrFI | CCNGG | 1 cut(s) | 10 |
| BmsI | GCATC | 1 cut(s) | 70 |
| BpuMI | CCSGG | 1 cut(s) | 10 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 260 |
| BseGI | GGATG | 2 cut(s) | 85, 316 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 260 |
| Bsh1236I | CGCG | 1 cut(s) | 166 |
| BshFI | GGCC | 1 cut(s) | 169 |
| BsiSI | CCGG | 1 cut(s) | 9 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 260 |
| BsnI | GGCC | 1 cut(s) | 169 |
| BspACI | CCGC | 2 cut(s) | 18, 166 |
| BspANI | GGCC | 1 cut(s) | 169 |
| BspFNI | CGCG | 1 cut(s) | 166 |
| BssSI | CACGAG | 1 cut(s) | 171 |
| Bst2BI | CACGAG | 1 cut(s) | 171 |
| Bst4CI | ACNGT | 3 cut(s) | 31, 59, 235 |
| BstF5I | GGATG | 2 cut(s) | 85, 316 |
| BstFNI | CGCG | 1 cut(s) | 166 |
| BstSCI | CCNGG | 1 cut(s) | 8 |
| BstUI | CGCG | 1 cut(s) | 166 |
| BsuRI | GGCC | 1 cut(s) | 169 |
| BtsCI | GGATG | 2 cut(s) | 85, 316 |
| Cfr13I | GGNCC | 1 cut(s) | 6 |
| CviAII | CATG | 4 cut(s) | 14, 129, 158, 358 |
| CviJI | RGCY | 3 cut(s) | 169, 221, 253 |
| CviKI_1 | RGCY | 3 cut(s) | 169, 221, 253 |
| EciI | GGCGGA | 1 cut(s) | 33 |
| Eco47I | GGWCC | 1 cut(s) | 6 |
| FaeI | CATG | 4 cut(s) | 17, 132, 161, 361 |
| FaiI | YATR | 5 cut(s) | 15, 130, 159, 345, 359 |
| FatI | CATG | 4 cut(s) | 13, 128, 157, 357 |
| Fnu4HI | GCNGC | 1 cut(s) | 167 |
| FokI | GGATG | 2 cut(s) | 92, 323 |
| Fsp4HI | GCNGC | 1 cut(s) | 167 |
| FspBI | CTAG | 1 cut(s) | 222 |
| GluI | GCNGC | 1 cut(s) | 167 |
| HaeIII | GGCC | 1 cut(s) | 169 |
| HapII | CCGG | 1 cut(s) | 9 |
| Hin1II | CATG | 4 cut(s) | 17, 132, 161, 361 |
| HpaII | CCGG | 1 cut(s) | 9 |
| HphI | GGTGA | 2 cut(s) | 19, 158 |
| Hpy166II | GTNNAC | 1 cut(s) | 184 |
| Hpy8I | GTNNAC | 1 cut(s) | 184 |
| HpyAV | CCTTC | 3 cut(s) | 53, 164, 301 |
| HpyCH4III | ACNGT | 3 cut(s) | 31, 59, 235 |
| HpyCH4IV | ACGT | 1 cut(s) | 280 |
| HpyCH4V | TGCA | 3 cut(s) | 49, 204, 347 |
| HpySE526I | ACGT | 1 cut(s) | 280 |
| Hsp92II | CATG | 4 cut(s) | 17, 132, 161, 361 |
| LpnPI | CCDG | 1 cut(s) | 22 |
| LweI | GCATC | 1 cut(s) | 70 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MaeII | ACGT | 1 cut(s) | 280 |
| MaeIII | GTNAC | 2 cut(s) | 53, 226 |
| MluCI | AATT | 4 cut(s) | 72, 101, 267, 325 |
| MmeI | TCCRAC | 1 cut(s) | 263 |
| MnlI | CCTC | 3 cut(s) | 70, 117, 180 |
| MseI | TTAA | 1 cut(s) | 192 |
| MspI | CCGG | 1 cut(s) | 9 |
| MspR9I | CCNGG | 1 cut(s) | 10 |
| MvnI | CGCG | 1 cut(s) | 166 |
| NciI | CCSGG | 1 cut(s) | 10 |
| NlaIII | CATG | 4 cut(s) | 17, 132, 161, 361 |
| PkrI | GCNGC | 1 cut(s) | 168 |
| PspPI | GGNCC | 1 cut(s) | 6 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 219, 251 |
| SaqAI | TTAA | 1 cut(s) | 192 |
| SatI | GCNGC | 1 cut(s) | 167 |
| Sau96I | GGNCC | 1 cut(s) | 6 |
| ScrFI | CCNGG | 1 cut(s) | 10 |
| SetI | ASST | 4 cut(s) | 8, 156, 223, 283 |
| SfaNI | GCATC | 1 cut(s) | 70 |
| SinI | GGWCC | 1 cut(s) | 6 |
| Sse9I | AATT | 4 cut(s) | 72, 101, 267, 325 |
| SsiI | CCGC | 2 cut(s) | 18, 166 |
| SspMI | CTAG | 1 cut(s) | 222 |
| StyD4I | CCNGG | 1 cut(s) | 8 |
| TaaI | ACNGT | 3 cut(s) | 31, 59, 235 |
| TaiI | ACGT | 1 cut(s) | 283 |
| TasI | AATT | 4 cut(s) | 72, 101, 267, 325 |
| TauI | GCSGC | 1 cut(s) | 169 |
| Tru1I | TTAA | 1 cut(s) | 192 |
| Tru9I | TTAA | 1 cut(s) | 192 |
| TspDTI | ATGAA | 4 cut(s) | 114, 117, 146, 309 |
| VpaK11BI | GGWCC | 1 cut(s) | 6 |
| XapI | RAATTY | 1 cut(s) | 101 |
| XspI | CTAG | 1 cut(s) | 222 |