DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0321591 RchiOBHm_Chr1g0322361 RchiOBHm_Chr1g0322621 RchiOBHm_Chr1g0322761 |
| rosa_laevigata | RLG00000030383 |
| rosa_multiflora | Rmu_sc0001168.1_g000011 Rmu_sc0003743.1_g000034 |
| rosa_samantha | Rh1AG051500 Rh1AG052500 Rh1AG052700 Rh1AG053400 Rh1BG029600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 76 |
| AjnI | CCWGG | 1 cut(s) | 157 |
| AoxI | GGCC | 1 cut(s) | 114 |
| AspS9I | GGNCC | 2 cut(s) | 115, 162 |
| AvaII | GGWCC | 1 cut(s) | 162 |
| BciT130I | CCWGG | 1 cut(s) | 159 |
| BclI | TGATCA | 1 cut(s) | 130 |
| BisI | GCNGC | 1 cut(s) | 76 |
| BlsI | GCNGC | 1 cut(s) | 77 |
| Bme1390I | CCNGG | 1 cut(s) | 159 |
| Bme18I | GGWCC | 1 cut(s) | 162 |
| BmgT120I | GGNCC | 2 cut(s) | 115, 162 |
| BmiI | GGNNCC | 3 cut(s) | 117, 155, 163 |
| BmrFI | CCNGG | 1 cut(s) | 159 |
| BpuEI | CTTGAG | 1 cut(s) | 143 |
| BsaJI | CCNNGG | 3 cut(s) | 52, 157, 158 |
| BseBI | CCWGG | 1 cut(s) | 159 |
| BseDI | CCNNGG | 3 cut(s) | 52, 157, 158 |
| BshFI | GGCC | 1 cut(s) | 116 |
| BsmI | GAATGC | 1 cut(s) | 77 |
| BsnI | GGCC | 1 cut(s) | 116 |
| Bsp143I | GATC | 1 cut(s) | 130 |
| BspACI | CCGC | 1 cut(s) | 76 |
| BspANI | GGCC | 1 cut(s) | 116 |
| BspLI | GGNNCC | 3 cut(s) | 117, 155, 163 |
| BssECI | CCNNGG | 3 cut(s) | 52, 157, 158 |
| BssMI | GATC | 1 cut(s) | 130 |
| Bst2UI | CCWGG | 1 cut(s) | 159 |
| BstDSI | CCRYGG | 1 cut(s) | 52 |
| BstKTI | GATC | 1 cut(s) | 133 |
| BstMBI | GATC | 1 cut(s) | 130 |
| BstNI | CCWGG | 1 cut(s) | 159 |
| BstSCI | CCNGG | 1 cut(s) | 157 |
| BsuRI | GGCC | 1 cut(s) | 116 |
| BtgI | CCRYGG | 1 cut(s) | 52 |
| Cfr13I | GGNCC | 2 cut(s) | 115, 162 |
| CviJI | RGCY | 4 cut(s) | 8, 57, 116, 127 |
| CviKI_1 | RGCY | 4 cut(s) | 8, 57, 116, 127 |
| DpnI | GATC | 1 cut(s) | 132 |
| DpnII | GATC | 1 cut(s) | 130 |
| Eco47I | GGWCC | 1 cut(s) | 162 |
| EcoO109I | RGGNCCY | 1 cut(s) | 162 |
| EcoRII | CCWGG | 1 cut(s) | 157 |
| FaiI | YATR | 3 cut(s) | 21, 60, 69 |
| FbaI | TGATCA | 1 cut(s) | 130 |
| Fnu4HI | GCNGC | 1 cut(s) | 76 |
| Fsp4HI | GCNGC | 1 cut(s) | 76 |
| GluI | GCNGC | 1 cut(s) | 76 |
| HaeIII | GGCC | 1 cut(s) | 116 |
| HinfI | GANTC | 1 cut(s) | 85 |
| Ksp22I | TGATCA | 1 cut(s) | 130 |
| Kzo9I | GATC | 1 cut(s) | 130 |
| LpnPI | CCDG | 3 cut(s) | 54, 141, 144 |
| MalI | GATC | 1 cut(s) | 132 |
| MboI | GATC | 1 cut(s) | 130 |
| MboII | GAAGA | 1 cut(s) | 38 |
| MspR9I | CCNGG | 1 cut(s) | 159 |
| Mva1269I | GAATGC | 1 cut(s) | 77 |
| MvaI | CCWGG | 1 cut(s) | 159 |
| NdeII | GATC | 1 cut(s) | 130 |
| NlaIV | GGNNCC | 3 cut(s) | 117, 155, 163 |
| PasI | CCCWGGG | 1 cut(s) | 158 |
| PctI | GAATGC | 1 cut(s) | 77 |
| PfeI | GAWTC | 1 cut(s) | 85 |
| PkrI | GCNGC | 1 cut(s) | 77 |
| PpuMI | RGGWCCY | 1 cut(s) | 162 |
| Psp5II | RGGWCCY | 1 cut(s) | 162 |
| Psp6I | CCWGG | 1 cut(s) | 157 |
| PspGI | CCWGG | 1 cut(s) | 157 |
| PspN4I | GGNNCC | 3 cut(s) | 117, 155, 163 |
| PspPI | GGNCC | 2 cut(s) | 115, 162 |
| PspPPI | RGGWCCY | 1 cut(s) | 162 |
| SatI | GCNGC | 1 cut(s) | 76 |
| Sau3AI | GATC | 1 cut(s) | 130 |
| Sau96I | GGNCC | 2 cut(s) | 115, 162 |
| ScrFI | CCNGG | 1 cut(s) | 159 |
| SetI | ASST | 3 cut(s) | 43, 114, 167 |
| SgeI | CNNG | 7 cut(s) | 53, 65, 91, 101, 134, 140, 146 |
| SinI | GGWCC | 1 cut(s) | 162 |
| SmlI | CTYRAG | 1 cut(s) | 122 |
| SmoI | CTYRAG | 1 cut(s) | 122 |
| SsiI | CCGC | 1 cut(s) | 76 |
| StyD4I | CCNGG | 1 cut(s) | 157 |
| TauI | GCSGC | 1 cut(s) | 78 |
| TfiI | GAWTC | 1 cut(s) | 85 |
| TspDTI | ATGAA | 3 cut(s) | 17, 45, 84 |
| TspGWI | ACGGA | 1 cut(s) | 41 |
| VpaK11BI | GGWCC | 1 cut(s) | 162 |