DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0321591 RchiOBHm_Chr1g0322361 RchiOBHm_Chr1g0322621 RchiOBHm_Chr1g0322761 |
| rosa_laevigata | RLG00000030383 |
| rosa_multiflora | Rmu_sc0001168.1_g000011 Rmu_sc0003743.1_g000034 |
| rosa_samantha | Rh1AG051500 Rh1AG052500 Rh1AG052700 Rh1AG053400 Rh1BG029600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 70 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 31 |
| AgsI | TTSAA | 2 cut(s) | 115, 320 |
| AluBI | AGCT | 1 cut(s) | 180 |
| AluI | AGCT | 1 cut(s) | 180 |
| ApoI | RAATTY | 1 cut(s) | 70 |
| AspS9I | GGNCC | 1 cut(s) | 22 |
| AsuHPI | GGTGA | 3 cut(s) | 92, 248, 288 |
| AvaII | GGWCC | 1 cut(s) | 22 |
| BciVI | GTATCC | 1 cut(s) | 207 |
| BfaI | CTAG | 1 cut(s) | 192 |
| BfuI | GTATCC | 1 cut(s) | 207 |
| Bme18I | GGWCC | 1 cut(s) | 22 |
| BmgT120I | GGNCC | 1 cut(s) | 22 |
| BmiI | GGNNCC | 2 cut(s) | 14, 23 |
| BmrI | ACTGGG | 1 cut(s) | 74 |
| BmsI | GCATC | 1 cut(s) | 144 |
| BmuI | ACTGGG | 1 cut(s) | 74 |
| Bsa29I | ATCGAT | 1 cut(s) | 121 |
| BsaJI | CCNNGG | 1 cut(s) | 17 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 31 |
| Bse1I | ACTGG | 1 cut(s) | 69 |
| BseCI | ATCGAT | 1 cut(s) | 121 |
| BseDI | CCNNGG | 1 cut(s) | 17 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 31 |
| BseNI | ACTGG | 1 cut(s) | 69 |
| BsgI | GTGCAG | 1 cut(s) | 190 |
| BshVI | ATCGAT | 1 cut(s) | 121 |
| BslFI | GGGAC | 1 cut(s) | 35 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 31 |
| BsmFI | GGGAC | 1 cut(s) | 35 |
| BsmI | GAATGC | 1 cut(s) | 326 |
| Bsp143I | GATC | 1 cut(s) | 118 |
| BspDI | ATCGAT | 1 cut(s) | 121 |
| BspLI | GGNNCC | 2 cut(s) | 14, 23 |
| BspQI | GCTCTTC | 1 cut(s) | 156 |
| BsrI | ACTGG | 1 cut(s) | 69 |
| BssECI | CCNNGG | 1 cut(s) | 17 |
| BssMI | GATC | 1 cut(s) | 118 |
| BssT1I | CCWWGG | 1 cut(s) | 17 |
| Bst4CI | ACNGT | 1 cut(s) | 91 |
| Bst6I | CTCTTC | 1 cut(s) | 156 |
| BstKTI | GATC | 1 cut(s) | 121 |
| BstMBI | GATC | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 177 |
| Bsu15I | ATCGAT | 1 cut(s) | 121 |
| BsuI | GTATCC | 1 cut(s) | 207 |
| BsuTUI | ATCGAT | 1 cut(s) | 121 |
| BtsIMutI | CAGTG | 3 cut(s) | 62, 96, 226 |
| Cfr13I | GGNCC | 1 cut(s) | 22 |
| ClaI | ATCGAT | 1 cut(s) | 121 |
| CviAII | CATG | 1 cut(s) | 306 |
| CviJI | RGCY | 3 cut(s) | 95, 180, 191 |
| CviKI_1 | RGCY | 3 cut(s) | 95, 180, 191 |
| DpnI | GATC | 1 cut(s) | 120 |
| DpnII | GATC | 1 cut(s) | 118 |
| Eam1104I | CTCTTC | 1 cut(s) | 156 |
| EarI | CTCTTC | 1 cut(s) | 156 |
| Eco130I | CCWWGG | 1 cut(s) | 17 |
| Eco47I | GGWCC | 1 cut(s) | 22 |
| EcoT14I | CCWWGG | 1 cut(s) | 17 |
| ErhI | CCWWGG | 1 cut(s) | 17 |
| FaeI | CATG | 1 cut(s) | 309 |
| FaiI | YATR | 2 cut(s) | 57, 307 |
| FaqI | GGGAC | 1 cut(s) | 35 |
| FatI | CATG | 1 cut(s) | 305 |
| FspBI | CTAG | 1 cut(s) | 192 |
| Hin1II | CATG | 1 cut(s) | 309 |
| HphI | GGTGA | 3 cut(s) | 92, 248, 288 |
| Hpy188I | TCNGA | 1 cut(s) | 233 |
| Hpy188III | TCNNGA | 2 cut(s) | 79, 200 |
| HpyCH4III | ACNGT | 1 cut(s) | 91 |
| HpyCH4V | TGCA | 2 cut(s) | 171, 311 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 177 |
| Hsp92II | CATG | 1 cut(s) | 309 |
| Kzo9I | GATC | 1 cut(s) | 118 |
| LguI | GCTCTTC | 1 cut(s) | 156 |
| LmnI | GCTCC | 1 cut(s) | 266 |
| LpnPI | CCDG | 6 cut(s) | 28, 50, 92, 116, 142, 291 |
| LweI | GCATC | 1 cut(s) | 144 |
| MaeI | CTAG | 1 cut(s) | 192 |
| MaeIII | GTNAC | 1 cut(s) | 60 |
| MalI | GATC | 1 cut(s) | 120 |
| MboI | GATC | 1 cut(s) | 118 |
| MboII | GAAGA | 2 cut(s) | 143, 218 |
| MluCI | AATT | 1 cut(s) | 70 |
| MnlI | CCTC | 4 cut(s) | 155, 227, 247, 276 |
| Mva1269I | GAATGC | 1 cut(s) | 326 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 177 |
| NdeII | GATC | 1 cut(s) | 118 |
| NlaIII | CATG | 1 cut(s) | 309 |
| NlaIV | GGNNCC | 2 cut(s) | 14, 23 |
| NmuCI | GTSAC | 1 cut(s) | 60 |
| PciSI | GCTCTTC | 1 cut(s) | 156 |
| PctI | GAATGC | 1 cut(s) | 326 |
| PspN4I | GGNNCC | 2 cut(s) | 14, 23 |
| PspPI | GGNCC | 1 cut(s) | 22 |
| SapI | GCTCTTC | 1 cut(s) | 156 |
| Sau3AI | GATC | 1 cut(s) | 118 |
| Sau96I | GGNCC | 1 cut(s) | 22 |
| SetI | ASST | 6 cut(s) | 105, 182, 197, 238, 258, 301 |
| SfaNI | GCATC | 1 cut(s) | 144 |
| SinI | GGWCC | 1 cut(s) | 22 |
| Sse9I | AATT | 1 cut(s) | 70 |
| SspMI | CTAG | 1 cut(s) | 192 |
| StyI | CCWWGG | 1 cut(s) | 17 |
| TaaI | ACNGT | 1 cut(s) | 91 |
| TaqI | TCGA | 1 cut(s) | 121 |
| TasI | AATT | 1 cut(s) | 70 |
| TscAI | CASTG | 3 cut(s) | 69, 96, 226 |
| TseFI | GTSAC | 1 cut(s) | 60 |
| Tsp45I | GTSAC | 1 cut(s) | 60 |
| TspDTI | ATGAA | 2 cut(s) | 63, 219 |
| TspRI | CASTG | 3 cut(s) | 69, 96, 226 |
| VpaK11BI | GGWCC | 1 cut(s) | 22 |
| XapI | RAATTY | 1 cut(s) | 70 |
| XspI | CTAG | 1 cut(s) | 192 |