DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0321591 RchiOBHm_Chr1g0322361 RchiOBHm_Chr1g0322621 RchiOBHm_Chr1g0322761 |
| rosa_laevigata | RLG00000030383 |
| rosa_multiflora | Rmu_sc0001168.1_g000011 Rmu_sc0003743.1_g000034 |
| rosa_samantha | Rh1AG051500 Rh1AG052500 Rh1AG052700 Rh1AG053400 Rh1BG029600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 199 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 201 |
| AgsI | TTSAA | 1 cut(s) | 63 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 128, 160 |
| AluBI | AGCT | 2 cut(s) | 43, 150 |
| AluI | AGCT | 2 cut(s) | 43, 150 |
| Alw26I | GTCTC | 1 cut(s) | 50 |
| AoxI | GGCC | 1 cut(s) | 17 |
| ApeKI | GCWGC | 1 cut(s) | 150 |
| AsuHPI | GGTGA | 1 cut(s) | 151 |
| BbvI | GCAGC | 1 cut(s) | 137 |
| BclI | TGATCA | 1 cut(s) | 139 |
| BcoDI | GTCTC | 1 cut(s) | 50 |
| BisI | GCNGC | 1 cut(s) | 151 |
| BlsI | GCNGC | 1 cut(s) | 152 |
| BmsI | GCATC | 1 cut(s) | 194 |
| BsaJI | CCNNGG | 1 cut(s) | 5 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 201 |
| BseDI | CCNNGG | 1 cut(s) | 5 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BseMII | CTCAG | 1 cut(s) | 66 |
| BseXI | GCAGC | 1 cut(s) | 137 |
| BseYI | CCCAGC | 1 cut(s) | 201 |
| BsgI | GTGCAG | 1 cut(s) | 234 |
| BshFI | GGCC | 1 cut(s) | 19 |
| BslFI | GGGAC | 1 cut(s) | 41 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BsmAI | GTCTC | 1 cut(s) | 50 |
| BsmFI | GGGAC | 1 cut(s) | 41 |
| BsnI | GGCC | 1 cut(s) | 19 |
| Bsp143I | GATC | 1 cut(s) | 139 |
| BspACI | CCGC | 1 cut(s) | 199 |
| BspANI | GGCC | 1 cut(s) | 19 |
| BspCNI | CTCAG | 1 cut(s) | 65 |
| BssECI | CCNNGG | 1 cut(s) | 5 |
| BssMI | GATC | 1 cut(s) | 139 |
| BssT1I | CCWWGG | 1 cut(s) | 5 |
| BstC8I | GCNNGC | 1 cut(s) | 183 |
| BstDEI | CTNAG | 1 cut(s) | 52 |
| BstKTI | GATC | 1 cut(s) | 142 |
| BstMAI | GTCTC | 1 cut(s) | 50 |
| BstMBI | GATC | 1 cut(s) | 139 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 221 |
| BstV1I | GCAGC | 1 cut(s) | 137 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 12 |
| BsuRI | GGCC | 1 cut(s) | 19 |
| Cac8I | GCNNGC | 1 cut(s) | 183 |
| CviJI | RGCY | 5 cut(s) | 19, 43, 92, 150, 224 |
| CviKI_1 | RGCY | 5 cut(s) | 19, 43, 92, 150, 224 |
| DdeI | CTNAG | 1 cut(s) | 52 |
| DpnI | GATC | 1 cut(s) | 141 |
| DpnII | GATC | 1 cut(s) | 139 |
| Eco130I | CCWWGG | 1 cut(s) | 5 |
| EcoT14I | CCWWGG | 1 cut(s) | 5 |
| ErhI | CCWWGG | 1 cut(s) | 5 |
| FaiI | YATR | 2 cut(s) | 13, 108 |
| FaqI | GGGAC | 1 cut(s) | 41 |
| FbaI | TGATCA | 1 cut(s) | 139 |
| Fnu4HI | GCNGC | 1 cut(s) | 151 |
| Fsp4HI | GCNGC | 1 cut(s) | 151 |
| GluI | GCNGC | 1 cut(s) | 151 |
| GsaI | CCCAGC | 1 cut(s) | 205 |
| HaeIII | GGCC | 1 cut(s) | 19 |
| HphI | GGTGA | 1 cut(s) | 151 |
| Hpy188I | TCNGA | 1 cut(s) | 55 |
| HpyAV | CCTTC | 3 cut(s) | 82, 205, 236 |
| HpyCH4V | TGCA | 3 cut(s) | 74, 110, 215 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 221 |
| HpyF3I | CTNAG | 1 cut(s) | 52 |
| Ksp22I | TGATCA | 1 cut(s) | 139 |
| Kzo9I | GATC | 1 cut(s) | 139 |
| LpnPI | CCDG | 2 cut(s) | 138, 187 |
| Lsp1109I | GCAGC | 1 cut(s) | 137 |
| LweI | GCATC | 1 cut(s) | 194 |
| MaeIII | GTNAC | 1 cut(s) | 157 |
| MalI | GATC | 1 cut(s) | 141 |
| MboI | GATC | 1 cut(s) | 139 |
| MboII | GAAGA | 1 cut(s) | 97 |
| MfeI | CAATTG | 1 cut(s) | 63 |
| MluCI | AATT | 4 cut(s) | 22, 46, 63, 143 |
| MseI | TTAA | 2 cut(s) | 80, 96 |
| MspA1I | CMGCKG | 2 cut(s) | 150, 201 |
| MunI | CAATTG | 1 cut(s) | 63 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 221 |
| NdeII | GATC | 1 cut(s) | 139 |
| NmuCI | GTSAC | 1 cut(s) | 157 |
| PkrI | GCNGC | 1 cut(s) | 152 |
| PspFI | CCCAGC | 1 cut(s) | 201 |
| PvuII | CAGCTG | 1 cut(s) | 150 |
| SaqAI | TTAA | 2 cut(s) | 80, 96 |
| SatI | GCNGC | 1 cut(s) | 151 |
| Sau3AI | GATC | 1 cut(s) | 139 |
| SetI | ASST | 2 cut(s) | 45, 152 |
| SfaNI | GCATC | 1 cut(s) | 194 |
| SgeI | CNNG | 6 cut(s) | 18, 43, 81, 137, 194, 214 |
| Sse9I | AATT | 4 cut(s) | 22, 46, 63, 143 |
| SsiI | CCGC | 1 cut(s) | 199 |
| StyI | CCWWGG | 1 cut(s) | 5 |
| TasI | AATT | 4 cut(s) | 22, 46, 63, 143 |
| Tru1I | TTAA | 2 cut(s) | 80, 96 |
| Tru9I | TTAA | 2 cut(s) | 80, 96 |
| TseFI | GTSAC | 1 cut(s) | 157 |
| TseI | GCWGC | 1 cut(s) | 150 |
| Tsp45I | GTSAC | 1 cut(s) | 157 |
| TspDTI | ATGAA | 1 cut(s) | 218 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 12, 169 |