DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0321591 RchiOBHm_Chr1g0322361 RchiOBHm_Chr1g0322621 RchiOBHm_Chr1g0322761 |
| rosa_laevigata | RLG00000030383 |
| rosa_multiflora | Rmu_sc0001168.1_g000011 Rmu_sc0003743.1_g000034 |
| rosa_samantha | Rh1AG051500 Rh1AG052500 Rh1AG052700 Rh1AG053400 Rh1BG029600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 31 |
| AccI | GTMKAC | 1 cut(s) | 6 |
| AciI | CCGC | 2 cut(s) | 31, 106 |
| AclWI | GGATC | 1 cut(s) | 188 |
| AcvI | CACGTG | 1 cut(s) | 12 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 93 |
| AflIII | ACRYGT | 2 cut(s) | 9, 11 |
| AluBI | AGCT | 1 cut(s) | 133 |
| AluI | AGCT | 1 cut(s) | 133 |
| Alw26I | GTCTC | 1 cut(s) | 50 |
| AlwI | GGATC | 1 cut(s) | 188 |
| AoxI | GGCC | 1 cut(s) | 107 |
| ApeKI | GCWGC | 1 cut(s) | 258 |
| BbrPI | CACGTG | 1 cut(s) | 12 |
| BbvI | GCAGC | 1 cut(s) | 245 |
| BcoDI | GTCTC | 1 cut(s) | 50 |
| BfaI | CTAG | 1 cut(s) | 159 |
| BisI | GCNGC | 2 cut(s) | 107, 259 |
| BlsI | GCNGC | 2 cut(s) | 108, 260 |
| BmsI | GCATC | 1 cut(s) | 67 |
| BoxI | GACNNNNGTC | 1 cut(s) | 12 |
| BsaAI | YACGTR | 1 cut(s) | 12 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 93 |
| Bse1I | ACTGG | 1 cut(s) | 40 |
| Bse3DI | GCAATG | 1 cut(s) | 153 |
| BseGI | GGATG | 1 cut(s) | 124 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 93 |
| BseMI | GCAATG | 1 cut(s) | 153 |
| BseMII | CTCAG | 1 cut(s) | 165 |
| BseNI | ACTGG | 1 cut(s) | 40 |
| BseXI | GCAGC | 1 cut(s) | 245 |
| BshFI | GGCC | 1 cut(s) | 109 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 93 |
| BsmAI | GTCTC | 1 cut(s) | 50 |
| BsmBI | CGTCTC | 1 cut(s) | 50 |
| BsmI | GAATGC | 1 cut(s) | 260 |
| BsnI | GGCC | 1 cut(s) | 109 |
| Bsp143I | GATC | 2 cut(s) | 121, 180 |
| BspACI | CCGC | 2 cut(s) | 31, 106 |
| BspANI | GGCC | 1 cut(s) | 109 |
| BspCNI | CTCAG | 1 cut(s) | 166 |
| BspHI | TCATGA | 1 cut(s) | 183 |
| BspPI | GGATC | 1 cut(s) | 188 |
| BsrBI | CCGCTC | 1 cut(s) | 31 |
| BsrDI | GCAATG | 1 cut(s) | 153 |
| BsrI | ACTGG | 1 cut(s) | 40 |
| BssMI | GATC | 2 cut(s) | 121, 180 |
| BstBAI | YACGTR | 1 cut(s) | 12 |
| BstDEI | CTNAG | 1 cut(s) | 174 |
| BstF5I | GGATG | 1 cut(s) | 124 |
| BstKTI | GATC | 2 cut(s) | 124, 183 |
| BstMAI | GTCTC | 1 cut(s) | 50 |
| BstMBI | GATC | 2 cut(s) | 121, 180 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 12 |
| BstV1I | GCAGC | 1 cut(s) | 245 |
| BsuRI | GGCC | 1 cut(s) | 109 |
| BtsCI | GGATG | 1 cut(s) | 124 |
| CciI | TCATGA | 1 cut(s) | 183 |
| CviAII | CATG | 2 cut(s) | 88, 184 |
| CviJI | RGCY | 3 cut(s) | 109, 133, 191 |
| CviKI_1 | RGCY | 3 cut(s) | 109, 133, 191 |
| DdeI | CTNAG | 1 cut(s) | 174 |
| DpnI | GATC | 2 cut(s) | 123, 182 |
| DpnII | GATC | 2 cut(s) | 121, 180 |
| Eco72I | CACGTG | 1 cut(s) | 12 |
| EcoT22I | ATGCAT | 1 cut(s) | 82 |
| Esp3I | CGTCTC | 1 cut(s) | 50 |
| FaeI | CATG | 2 cut(s) | 91, 187 |
| FaiI | YATR | 6 cut(s) | 71, 89, 185, 204, 243, 252 |
| FatI | CATG | 2 cut(s) | 87, 183 |
| FblI | GTMKAC | 1 cut(s) | 6 |
| Fnu4HI | GCNGC | 2 cut(s) | 107, 259 |
| FokI | GGATG | 1 cut(s) | 131 |
| Fsp4HI | GCNGC | 2 cut(s) | 107, 259 |
| FspBI | CTAG | 1 cut(s) | 159 |
| GluI | GCNGC | 2 cut(s) | 107, 259 |
| HaeIII | GGCC | 1 cut(s) | 109 |
| Hin1II | CATG | 2 cut(s) | 91, 187 |
| HincII | GTYRAC | 1 cut(s) | 7 |
| HindII | GTYRAC | 1 cut(s) | 7 |
| HinfI | GANTC | 2 cut(s) | 39, 268 |
| Hpy166II | GTNNAC | 1 cut(s) | 7 |
| Hpy188I | TCNGA | 1 cut(s) | 126 |
| Hpy188III | TCNNGA | 1 cut(s) | 184 |
| Hpy8I | GTNNAC | 1 cut(s) | 7 |
| Hpy99I | CGWCG | 1 cut(s) | 240 |
| HpyAV | CCTTC | 2 cut(s) | 65, 181 |
| HpyCH4IV | ACGT | 1 cut(s) | 11 |
| HpyCH4V | TGCA | 4 cut(s) | 80, 153, 164, 261 |
| HpyF3I | CTNAG | 1 cut(s) | 174 |
| HpySE526I | ACGT | 1 cut(s) | 11 |
| Hsp92II | CATG | 2 cut(s) | 91, 187 |
| Kzo9I | GATC | 2 cut(s) | 121, 180 |
| LpnPI | CCDG | 2 cut(s) | 21, 237 |
| Lsp1109I | GCAGC | 1 cut(s) | 245 |
| LweI | GCATC | 1 cut(s) | 67 |
| MaeI | CTAG | 1 cut(s) | 159 |
| MaeII | ACGT | 1 cut(s) | 11 |
| MalI | GATC | 2 cut(s) | 123, 182 |
| MbiI | CCGCTC | 1 cut(s) | 31 |
| MboI | GATC | 2 cut(s) | 121, 180 |
| MboII | GAAGA | 1 cut(s) | 221 |
| MluCI | AATT | 2 cut(s) | 136, 168 |
| MnlI | CCTC | 2 cut(s) | 90, 171 |
| Mph1103I | ATGCAT | 1 cut(s) | 82 |
| MseI | TTAA | 1 cut(s) | 195 |
| Mva1269I | GAATGC | 1 cut(s) | 260 |
| NdeII | GATC | 2 cut(s) | 121, 180 |
| NlaIII | CATG | 2 cut(s) | 91, 187 |
| NsiI | ATGCAT | 1 cut(s) | 82 |
| PagI | TCATGA | 1 cut(s) | 183 |
| PctI | GAATGC | 1 cut(s) | 260 |
| PfeI | GAWTC | 2 cut(s) | 39, 268 |
| PkrI | GCNGC | 2 cut(s) | 108, 260 |
| PmaCI | CACGTG | 1 cut(s) | 12 |
| PmlI | CACGTG | 1 cut(s) | 12 |
| Ppu21I | YACGTR | 1 cut(s) | 12 |
| PshAI | GACNNNNGTC | 1 cut(s) | 12 |
| PspCI | CACGTG | 1 cut(s) | 12 |
| SalI | GTCGAC | 1 cut(s) | 5 |
| SaqAI | TTAA | 1 cut(s) | 195 |
| SatI | GCNGC | 2 cut(s) | 107, 259 |
| Sau3AI | GATC | 2 cut(s) | 121, 180 |
| SetI | ASST | 4 cut(s) | 14, 101, 135, 226 |
| SfaNI | GCATC | 1 cut(s) | 67 |
| Sse9I | AATT | 2 cut(s) | 136, 168 |
| SsiI | CCGC | 2 cut(s) | 31, 106 |
| SspMI | CTAG | 1 cut(s) | 159 |
| TaiI | ACGT | 1 cut(s) | 14 |
| TaqI | TCGA | 1 cut(s) | 6 |
| TasI | AATT | 2 cut(s) | 136, 168 |
| TauI | GCSGC | 1 cut(s) | 109 |
| TfiI | GAWTC | 2 cut(s) | 39, 268 |
| Tru1I | TTAA | 1 cut(s) | 195 |
| Tru9I | TTAA | 1 cut(s) | 195 |
| TseI | GCWGC | 1 cut(s) | 258 |
| TspDTI | ATGAA | 4 cut(s) | 200, 222, 228, 267 |
| TspGWI | ACGGA | 2 cut(s) | 32, 224 |
| XmiI | GTMKAC | 1 cut(s) | 6 |
| XspI | CTAG | 1 cut(s) | 159 |
| Zsp2I | ATGCAT | 1 cut(s) | 82 |