DNA (cytosine-5)-methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0321591 RchiOBHm_Chr1g0322361 RchiOBHm_Chr1g0322621 RchiOBHm_Chr1g0322761 |
| rosa_laevigata | RLG00000030383 |
| rosa_multiflora | Rmu_sc0001168.1_g000011 Rmu_sc0003743.1_g000034 |
| rosa_samantha | Rh1AG051500 Rh1AG052500 Rh1AG052700 Rh1AG053400 Rh1BG029600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 69 |
| Acc36I | ACCTGC | 1 cut(s) | 69 |
| AcsI | RAATTY | 1 cut(s) | 211 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 172 |
| AgsI | TTSAA | 1 cut(s) | 256 |
| AluBI | AGCT | 1 cut(s) | 321 |
| AluI | AGCT | 1 cut(s) | 321 |
| Alw26I | GTCTC | 1 cut(s) | 156 |
| AoxI | GGCC | 1 cut(s) | 114 |
| ApoI | RAATTY | 1 cut(s) | 211 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 144 |
| AspS9I | GGNCC | 1 cut(s) | 115 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 129, 161 |
| BbsI | GAAGAC | 1 cut(s) | 277 |
| BccI | CCATC | 1 cut(s) | 60 |
| BciVI | GTATCC | 1 cut(s) | 348 |
| BcoDI | GTCTC | 1 cut(s) | 156 |
| BfaI | CTAG | 1 cut(s) | 159 |
| BfuAI | ACCTGC | 1 cut(s) | 69 |
| BfuI | GTATCC | 1 cut(s) | 348 |
| BmgT120I | GGNCC | 1 cut(s) | 115 |
| BmiI | GGNNCC | 1 cut(s) | 117 |
| BmrI | ACTGGG | 1 cut(s) | 215 |
| BmsI | GCATC | 1 cut(s) | 285 |
| BmuI | ACTGGG | 1 cut(s) | 215 |
| BoxI | GACNNNNGTC | 1 cut(s) | 199 |
| BpiI | GAAGAC | 1 cut(s) | 277 |
| BpuEI | CTTGAG | 1 cut(s) | 143 |
| Bsa29I | ATCGAT | 1 cut(s) | 262 |
| BsaI | GGTCTC | 1 cut(s) | 156 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 172 |
| Bse1I | ACTGG | 1 cut(s) | 210 |
| BseCI | ATCGAT | 1 cut(s) | 262 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 172 |
| BseNI | ACTGG | 1 cut(s) | 210 |
| BseRI | GAGGAG | 1 cut(s) | 284 |
| BsgI | GTGCAG | 1 cut(s) | 331 |
| BshFI | GGCC | 1 cut(s) | 116 |
| BshVI | ATCGAT | 1 cut(s) | 262 |
| BslFI | GGGAC | 1 cut(s) | 189 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 172 |
| BsmAI | GTCTC | 1 cut(s) | 156 |
| BsmFI | GGGAC | 1 cut(s) | 189 |
| BsnI | GGCC | 1 cut(s) | 116 |
| Bso31I | GGTCTC | 1 cut(s) | 156 |
| Bsp143I | GATC | 1 cut(s) | 259 |
| BspANI | GGCC | 1 cut(s) | 116 |
| BspDI | ATCGAT | 1 cut(s) | 262 |
| BspLI | GGNNCC | 1 cut(s) | 117 |
| BspMI | ACCTGC | 1 cut(s) | 69 |
| BspTNI | GGTCTC | 1 cut(s) | 156 |
| BsrI | ACTGG | 1 cut(s) | 210 |
| BssMI | GATC | 1 cut(s) | 259 |
| Bst4CI | ACNGT | 1 cut(s) | 232 |
| BstDEI | CTNAG | 1 cut(s) | 179 |
| BstKTI | GATC | 1 cut(s) | 262 |
| BstMAI | GTCTC | 1 cut(s) | 156 |
| BstMBI | GATC | 1 cut(s) | 259 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 318 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 199 |
| BstV2I | GAAGAC | 1 cut(s) | 277 |
| Bsu15I | ATCGAT | 1 cut(s) | 262 |
| BsuI | GTATCC | 1 cut(s) | 348 |
| BsuRI | GGCC | 1 cut(s) | 116 |
| BsuTUI | ATCGAT | 1 cut(s) | 262 |
| BtgZI | GCGATG | 1 cut(s) | 38 |
| BtsIMutI | CAGTG | 3 cut(s) | 203, 237, 367 |
| BveI | ACCTGC | 1 cut(s) | 69 |
| Cfr13I | GGNCC | 1 cut(s) | 115 |
| ClaI | ATCGAT | 1 cut(s) | 262 |
| CviAII | CATG | 1 cut(s) | 20 |
| CviJI | RGCY | 5 cut(s) | 8, 116, 127, 236, 321 |
| CviKI_1 | RGCY | 5 cut(s) | 8, 116, 127, 236, 321 |
| DdeI | CTNAG | 1 cut(s) | 179 |
| DpnI | GATC | 1 cut(s) | 261 |
| DpnII | GATC | 1 cut(s) | 259 |
| Eco31I | GGTCTC | 1 cut(s) | 156 |
| FaeI | CATG | 1 cut(s) | 23 |
| FaiI | YATR | 3 cut(s) | 21, 60, 69 |
| FaqI | GGGAC | 1 cut(s) | 189 |
| FatI | CATG | 1 cut(s) | 19 |
| FspBI | CTAG | 1 cut(s) | 159 |
| HaeIII | GGCC | 1 cut(s) | 116 |
| Hin1II | CATG | 1 cut(s) | 23 |
| HinfI | GANTC | 2 cut(s) | 85, 223 |
| Hpy188I | TCNGA | 2 cut(s) | 228, 374 |
| Hpy188III | TCNNGA | 2 cut(s) | 159, 220 |
| HpyCH4III | ACNGT | 1 cut(s) | 232 |
| HpyCH4V | TGCA | 1 cut(s) | 312 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 318 |
| HpyF3I | CTNAG | 1 cut(s) | 179 |
| Hsp92II | CATG | 1 cut(s) | 23 |
| Kzo9I | GATC | 1 cut(s) | 259 |
| LmnI | GCTCC | 1 cut(s) | 297 |
| LpnPI | CCDG | 9 cut(s) | 54, 64, 134, 141, 169, 191, 233, 257, 283 |
| LweI | GCATC | 1 cut(s) | 285 |
| MaeI | CTAG | 1 cut(s) | 159 |
| MaeIII | GTNAC | 1 cut(s) | 201 |
| MalI | GATC | 1 cut(s) | 261 |
| MboI | GATC | 1 cut(s) | 259 |
| MboII | GAAGA | 2 cut(s) | 277, 359 |
| MluCI | AATT | 1 cut(s) | 211 |
| MnlI | CCTC | 1 cut(s) | 305 |
| MroXI | GAANNNNTTC | 1 cut(s) | 144 |
| MseI | TTAA | 1 cut(s) | 12 |
| MslI | CAYNNNNRTG | 1 cut(s) | 57 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 318 |
| NdeII | GATC | 1 cut(s) | 259 |
| NlaIII | CATG | 1 cut(s) | 23 |
| NlaIV | GGNNCC | 1 cut(s) | 117 |
| NmuCI | GTSAC | 1 cut(s) | 201 |
| PaqCI | CACCTGC | 1 cut(s) | 69 |
| PdmI | GAANNNNTTC | 1 cut(s) | 144 |
| PfeI | GAWTC | 2 cut(s) | 85, 223 |
| PshAI | GACNNNNGTC | 1 cut(s) | 199 |
| PspN4I | GGNNCC | 1 cut(s) | 117 |
| PspPI | GGNCC | 1 cut(s) | 115 |
| RseI | CAYNNNNRTG | 1 cut(s) | 57 |
| SaqAI | TTAA | 1 cut(s) | 12 |
| Sau3AI | GATC | 1 cut(s) | 259 |
| Sau96I | GGNCC | 1 cut(s) | 115 |
| SetI | ASST | 4 cut(s) | 43, 83, 246, 323 |
| SfaNI | GCATC | 1 cut(s) | 285 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 57 |
| SmlI | CTYRAG | 1 cut(s) | 122 |
| SmoI | CTYRAG | 1 cut(s) | 122 |
| Sse9I | AATT | 1 cut(s) | 211 |
| SspMI | CTAG | 1 cut(s) | 159 |
| TaaI | ACNGT | 1 cut(s) | 232 |
| TaqI | TCGA | 1 cut(s) | 262 |
| TasI | AATT | 1 cut(s) | 211 |
| TfiI | GAWTC | 2 cut(s) | 85, 223 |
| Tru1I | TTAA | 1 cut(s) | 12 |
| Tru9I | TTAA | 1 cut(s) | 12 |
| TscAI | CASTG | 3 cut(s) | 210, 237, 367 |
| TseFI | GTSAC | 1 cut(s) | 201 |
| Tsp45I | GTSAC | 1 cut(s) | 201 |
| TspDTI | ATGAA | 6 cut(s) | 17, 45, 84, 147, 204, 360 |
| TspRI | CASTG | 3 cut(s) | 210, 237, 367 |
| XapI | RAATTY | 1 cut(s) | 211 |
| XbaI | TCTAGA | 1 cut(s) | 158 |
| XmnI | GAANNNNTTC | 1 cut(s) | 144 |
| XspI | CTAG | 1 cut(s) | 159 |