RchiOBHm_Chr1g0324971

Cell division

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
12767425 .. 12768575
1151 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 246 bp
ATGTGGTTTTGGAGATGTGGCATGATTTTGACAGGGCTCGTGGTCCTCTTCTTTGATGTGCCTGATTCCATTGCTACTCAAAGAGGTAGCAGTGTAGGTGTTGAGAGGGTTTTGAACATTACAAAACAAGATGGAGTGTCTACCAAGAAAAGTATTTTCGTTATCGGCATCACCAACAGATCTGACCTTATAGAACTTGCACTTCTACATCCAGCACATCTGGCCCCAGTAAGGAATCATATTTGA

Protein Analysis

81

Amino Acids

9.0

Weight (kDa)

9.18

Isoelectric Point (pI)

47.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 140
AfiI CCNNNNNNNGG 1 cut(s) 231
AgsI TTSAA 1 cut(s) 115
AoxI GGCC 1 cut(s) 222
AspS9I GGNCC 2 cut(s) 43, 223
AsuHPI GGTGA 1 cut(s) 163
AvaII GGWCC 1 cut(s) 43
BanII GRGCYC 1 cut(s) 39
BauI CACGAG 1 cut(s) 38
BccI CCATC 1 cut(s) 125
BglII AGATCT 1 cut(s) 179
Bme18I GGWCC 1 cut(s) 43
BmgT120I GGNCC 2 cut(s) 43, 223
BmiI GGNNCC 1 cut(s) 225
BmrI ACTGGG 1 cut(s) 221
BmsI GCATC 1 cut(s) 177
BmuI ACTGGG 1 cut(s) 221
Bsc4I CCNNNNNNNGG 1 cut(s) 231
Bse1I ACTGG 1 cut(s) 227
Bse3DI GCAATG 1 cut(s) 69
BseGI GGATG 1 cut(s) 208
BseLI CCNNNNNNNGG 1 cut(s) 231
BseMI GCAATG 1 cut(s) 69
BseNI ACTGG 1 cut(s) 227
BshFI GGCC 1 cut(s) 224
BslI CCNNNNNNNGG 1 cut(s) 231
BsnI GGCC 1 cut(s) 224
Bsp1286I GDGCHC 1 cut(s) 39
Bsp143I GATC 1 cut(s) 179
BspANI GGCC 1 cut(s) 224
BspLI GGNNCC 1 cut(s) 225
BsrDI GCAATG 1 cut(s) 69
BsrI ACTGG 1 cut(s) 227
BssMI GATC 1 cut(s) 179
BssSI CACGAG 1 cut(s) 38
Bst2BI CACGAG 1 cut(s) 38
Bst6I CTCTTC 1 cut(s) 53
BstF5I GGATG 1 cut(s) 208
BstKTI GATC 1 cut(s) 182
BstMBI GATC 1 cut(s) 179
BstMWI GCNNNNNNNGC 1 cut(s) 221
BstX2I RGATCY 1 cut(s) 179
BstYI RGATCY 1 cut(s) 179
BsuRI GGCC 1 cut(s) 224
BtsCI GGATG 1 cut(s) 208
BtsI GCAGTG 1 cut(s) 97
BtsIMutI CAGTG 1 cut(s) 97
Cfr13I GGNCC 2 cut(s) 43, 223
CviAII CATG 1 cut(s) 22
CviJI RGCY 2 cut(s) 37, 224
CviKI_1 RGCY 2 cut(s) 37, 224
DpnI GATC 1 cut(s) 181
DpnII GATC 1 cut(s) 179
Eam1104I CTCTTC 1 cut(s) 53
EarI CTCTTC 1 cut(s) 53
Eco24I GRGCYC 1 cut(s) 39
Eco47I GGWCC 1 cut(s) 43
EcoT38I GRGCYC 1 cut(s) 39
FaeI CATG 1 cut(s) 25
FaiI YATR 3 cut(s) 23, 191, 240
FatI CATG 1 cut(s) 21
FblI GTMKAC 1 cut(s) 140
FokI GGATG 1 cut(s) 195
FriOI GRGCYC 1 cut(s) 39
HaeIII GGCC 1 cut(s) 224
Hin1II CATG 1 cut(s) 25
HinfI GANTC 2 cut(s) 65, 235
HphI GGTGA 1 cut(s) 163
Hpy166II GTNNAC 1 cut(s) 141
Hpy188I TCNGA 1 cut(s) 184
Hpy8I GTNNAC 1 cut(s) 141
HpyCH4V TGCA 1 cut(s) 200
HpyF10VI GCNNNNNNNGC 1 cut(s) 221
Hsp92II CATG 1 cut(s) 25
Kzo9I GATC 1 cut(s) 179
LpnPI CCDG 5 cut(s) 18, 75, 206, 225, 240
LweI GCATC 1 cut(s) 177
MalI GATC 1 cut(s) 181
MboI GATC 1 cut(s) 179
MboII GAAGA 1 cut(s) 40
MflI RGATCY 1 cut(s) 179
MhlI GDGCHC 1 cut(s) 39
MnlI CCTC 3 cut(s) 56, 77, 99
MwoI GCNNNNNNNGC 1 cut(s) 221
NdeII GATC 1 cut(s) 179
NlaIII CATG 1 cut(s) 25
NlaIV GGNNCC 1 cut(s) 225
PfeI GAWTC 2 cut(s) 65, 235
PspN4I GGNNCC 1 cut(s) 225
PspPI GGNCC 2 cut(s) 43, 223
PsuI RGATCY 1 cut(s) 179
Sau3AI GATC 1 cut(s) 179
Sau96I GGNCC 2 cut(s) 43, 223
SduI GDGCHC 1 cut(s) 39
SetI ASST 3 cut(s) 88, 100, 189
SfaNI GCATC 1 cut(s) 177
SinI GGWCC 1 cut(s) 43
TfiI GAWTC 2 cut(s) 65, 235
TscAI CASTG 1 cut(s) 97
TspRI CASTG 1 cut(s) 97
VpaK11BI GGWCC 1 cut(s) 43
XmiI GTMKAC 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.