Rh1CG066600

Purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0018148
Physical Location & Seq
Forward (+)
13615843 .. 13628371
12529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG066600.1

Sequence Viewer

Length: 369 bp
ATGGTGACATTAATGGAGGTCCATGTGGAACTGTATACCATGGTCTGTGGGATGGATCACCAAAGCTGGTGGCCACTCTCAGGTAGAGTAACATTCGCCAATCCAAATGCTCTAGTTTATCCATGCTTAGCACAAGGGAAAATGTGGAATGAGATGACTGTAACATGGACAAGTGGATATGCTCTAGGGGAAGCAACACCTTTTGTTGAATGGGGTCAGAAAGGAGGAGAGCTTGTGAGATCCCCAACCGGGACTTTGACCTTCGATAGCAACAGCATGTGTGCGGCAAATCCTAAGCTCTCCATGAGGTTGTTCCTAAAAGAGGTTAGGGAATGCTCAATAATGGGGGTTGTTCACCTAAATTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

122

Amino Acids

13.61

Weight (kDa)

5.85

Isoelectric Point (pI)

23.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 35
AciI CCGC 1 cut(s) 284
AclWI GGATC 2 cut(s) 63, 234
AcoI YGGCCR 1 cut(s) 71
AcsI RAATTY 1 cut(s) 361
AfiI CCNNNNNNNGG 3 cut(s) 80, 249, 322
AgsI TTSAA 1 cut(s) 209
AluBI AGCT 3 cut(s) 66, 232, 298
AluI AGCT 3 cut(s) 66, 232, 298
AlwI GGATC 2 cut(s) 63, 234
AoxI GGCC 1 cut(s) 71
ApoI RAATTY 1 cut(s) 361
AseI ATTAAT 1 cut(s) 11
AspS9I GGNCC 1 cut(s) 19
AsuC2I CCSGG 1 cut(s) 250
AsuHPI GGTGA 3 cut(s) 16, 50, 347
AvaII GGWCC 1 cut(s) 19
BalI TGGCCA 1 cut(s) 73
BccI CCATC 1 cut(s) 46
BcnI CCSGG 1 cut(s) 250
BfaI CTAG 2 cut(s) 113, 185
BisI GCNGC 1 cut(s) 285
BlpI GCTNAGC 1 cut(s) 127
BlsI GCNGC 1 cut(s) 286
Bme1390I CCNGG 1 cut(s) 250
Bme18I GGWCC 1 cut(s) 19
BmgT120I GGNCC 1 cut(s) 19
BmrFI CCNGG 1 cut(s) 250
Bpu10I CCTNAGC 1 cut(s) 294
Bpu1102I GCTNAGC 1 cut(s) 127
BpuMI CCSGG 1 cut(s) 250
BsaJI CCNNGG 1 cut(s) 39
BsaXI ACNNNNNCTCC 2 cut(s) 219, 249
Bsc4I CCNNNNNNNGG 3 cut(s) 80, 249, 322
BseDI CCNNGG 1 cut(s) 39
BseGI GGATG 1 cut(s) 57
BseLI CCNNNNNNNGG 3 cut(s) 80, 249, 322
BseMII CTCAG 1 cut(s) 93
BseRI GAGGAG 1 cut(s) 240
BshFI GGCC 1 cut(s) 73
BsiSI CCGG 1 cut(s) 249
BslFI GGGAC 1 cut(s) 265
BslI CCNNNNNNNGG 3 cut(s) 80, 249, 322
BsmFI GGGAC 1 cut(s) 265
BsmI GAATGC 1 cut(s) 338
BsnI GGCC 1 cut(s) 73
Bsp143I GATC 2 cut(s) 55, 239
Bsp1720I GCTNAGC 1 cut(s) 127
Bsp19I CCATGG 1 cut(s) 39
BspACI CCGC 1 cut(s) 284
BspANI GGCC 1 cut(s) 73
BspCNI CTCAG 1 cut(s) 92
BspPI GGATC 2 cut(s) 63, 234
BssECI CCNNGG 1 cut(s) 39
BssMI GATC 2 cut(s) 55, 239
BssNAI GTATAC 1 cut(s) 36
BssT1I CCWWGG 1 cut(s) 39
Bst1107I GTATAC 1 cut(s) 36
Bst4CI ACNGT 2 cut(s) 33, 160
BstDEI CTNAG 3 cut(s) 79, 127, 294
BstDSI CCRYGG 1 cut(s) 39
BstENI CCTNNNNNAGG 1 cut(s) 320
BstF5I GGATG 1 cut(s) 57
BstKTI GATC 2 cut(s) 58, 242
BstMBI GATC 2 cut(s) 55, 239
BstNSI RCATGY 1 cut(s) 280
BstSCI CCNGG 1 cut(s) 248
BstX2I RGATCY 1 cut(s) 239
BstYI RGATCY 1 cut(s) 239
BstZ17I GTATAC 1 cut(s) 36
BsuRI GGCC 1 cut(s) 73
BtgI CCRYGG 1 cut(s) 39
BtsCI GGATG 1 cut(s) 57
Cfr13I GGNCC 1 cut(s) 19
CspCI CAANNNNNGTGG 2 cut(s) 50, 85
CviAII CATG 6 cut(s) 23, 40, 123, 165, 277, 304
CviJI RGCY 4 cut(s) 66, 73, 232, 298
CviKI_1 RGCY 4 cut(s) 66, 73, 232, 298
DdeI CTNAG 3 cut(s) 79, 127, 294
DpnI GATC 2 cut(s) 57, 241
DpnII GATC 2 cut(s) 55, 239
EaeI YGGCCR 1 cut(s) 71
Eco130I CCWWGG 1 cut(s) 39
Eco47I GGWCC 1 cut(s) 19
EcoNI CCTNNNNNAGG 1 cut(s) 320
EcoT14I CCWWGG 1 cut(s) 39
ErhI CCWWGG 1 cut(s) 39
FaeI CATG 6 cut(s) 26, 43, 126, 168, 280, 307
FaiI YATR 8 cut(s) 24, 36, 41, 124, 166, 180, 278, 305
FaqI GGGAC 1 cut(s) 265
FatI CATG 6 cut(s) 22, 39, 122, 164, 276, 303
FblI GTMKAC 1 cut(s) 35
Fnu4HI GCNGC 1 cut(s) 285
FokI GGATG 1 cut(s) 64
Fsp4HI GCNGC 1 cut(s) 285
FspBI CTAG 2 cut(s) 113, 185
GluI GCNGC 1 cut(s) 285
HaeIII GGCC 1 cut(s) 73
HapII CCGG 1 cut(s) 249
Hin1II CATG 6 cut(s) 26, 43, 126, 168, 280, 307
HpaII CCGG 1 cut(s) 249
HphI GGTGA 3 cut(s) 16, 50, 347
Hpy166II GTNNAC 2 cut(s) 36, 355
Hpy188I TCNGA 1 cut(s) 219
Hpy8I GTNNAC 2 cut(s) 36, 355
HpyAV CCTTC 1 cut(s) 271
HpyCH4III ACNGT 2 cut(s) 33, 160
HpyF3I CTNAG 3 cut(s) 79, 127, 294
Hsp92II CATG 6 cut(s) 26, 43, 126, 168, 280, 307
Kzo9I GATC 2 cut(s) 55, 239
LpnPI CCDG 3 cut(s) 52, 66, 262
MaeI CTAG 2 cut(s) 113, 185
MaeIII GTNAC 3 cut(s) 4, 88, 160
MalI GATC 2 cut(s) 57, 241
MboI GATC 2 cut(s) 55, 239
MflI RGATCY 1 cut(s) 239
MlsI TGGCCA 1 cut(s) 73
MluCI AATT 1 cut(s) 361
MluNI TGGCCA 1 cut(s) 73
MnlI CCTC 4 cut(s) 10, 218, 300, 316
Mox20I TGGCCA 1 cut(s) 73
MscI TGGCCA 1 cut(s) 73
MseI TTAA 1 cut(s) 11
Msp20I TGGCCA 1 cut(s) 73
MspI CCGG 1 cut(s) 249
MspR9I CCNGG 1 cut(s) 250
Mva1269I GAATGC 1 cut(s) 338
NciI CCSGG 1 cut(s) 250
NcoI CCATGG 1 cut(s) 39
NdeII GATC 2 cut(s) 55, 239
NlaIII CATG 6 cut(s) 26, 43, 126, 168, 280, 307
NmuCI GTSAC 1 cut(s) 4
NspI RCATGY 1 cut(s) 280
PctI GAATGC 1 cut(s) 338
PkrI GCNGC 1 cut(s) 286
PshBI ATTAAT 1 cut(s) 11
PspPI GGNCC 1 cut(s) 19
PsuI RGATCY 1 cut(s) 239
SaqAI TTAA 1 cut(s) 11
SatI GCNGC 1 cut(s) 285
Sau3AI GATC 2 cut(s) 55, 239
Sau96I GGNCC 1 cut(s) 19
ScrFI CCNGG 1 cut(s) 250
SinI GGWCC 1 cut(s) 19
Sse9I AATT 1 cut(s) 361
SsiI CCGC 1 cut(s) 284
SspMI CTAG 2 cut(s) 113, 185
StyD4I CCNGG 1 cut(s) 248
StyI CCWWGG 1 cut(s) 39
TaaI ACNGT 2 cut(s) 33, 160
TaqI TCGA 1 cut(s) 264
TasI AATT 1 cut(s) 361
TauI GCSGC 1 cut(s) 287
Tru1I TTAA 1 cut(s) 11
Tru9I TTAA 1 cut(s) 11
TseFI GTSAC 1 cut(s) 4
Tsp45I GTSAC 1 cut(s) 4
VpaK11BI GGWCC 1 cut(s) 19
VspI ATTAAT 1 cut(s) 11
XagI CCTNNNNNAGG 1 cut(s) 320
XapI RAATTY 1 cut(s) 361
XceI RCATGY 1 cut(s) 280
XmiI GTMKAC 1 cut(s) 35
XspI CTAG 2 cut(s) 113, 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.