Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012306

Physical Location & Seq

Genomic Coordinates Forward (+)

41116385 .. 41125229

Gene Structure 8845 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGCCCCGCTTCCCTCGCTTCTCCACCCCGCGCCTCCTCTACTCCCTCCACACCTCCAAAACGACGCCGTCCCGGTCCCCGCCCTCCTCTCTCCTCGTCGGCTCCTTCCACCTCCGCCAATTCTCCGCCGGCAACCTCGCACGTGCCAAGGACGACAAGGAGCTATGGTGGACGGACGTGATGGCCAGGCTCCGCAACATCGGAATCTCGGCCCATATCGACTCCGGCAAGACCACTCTCACCGAGAGAATTCTCTACTACACCGGAAAGATCCACGAGATTCACGAGGTCAGAGGCCGAGACGGCGTCGGCGCCAAAATGGACTCCATGGATTTGGAGAGAGAGAAGGGAATTACCATTCAGTCCGCTGCCACTTACTGCACTTGGAATGGTTATCAGATTAACATAATTGACACCCCTGGTCACGTTGATTTCACCATTGAGGTTGAGAGAGCTTTGCGTGTTCTTGATGGAGCCATCCTTGTCCTTTGTAGCGTTGGTGGTGTACAGAGTCAGTCAATTACTGTTGATCGGCAAATGAAAAGATACGAGGTTCCAAGAATTGCATTTATAAACAAACTTGATCGAATGGGAGCAGATCCATGGAAAGTTCTGAATCAGATGAGGTCTAAGCTCCGGCATCATGCTGCTGCATTGCAACTTCCTATTGGGTTGGAAGATGATTTTAAGGGTCTTATTGATCTTGTGCAGTTAAAAGCTTTGTATTTTCATGGTTCTAGCGGTCAGGAAATTGTCATTGAAGACATTCCTTCTGATATGGAGGCGTTAGTCGCAGAAAAAAGGCGAGAGCTAATTGAAATTGTTTCCGAAGTTGATGACCAACTGGCTGAAGCATTTCTTGAAGATGTGCCCATTACACCTACTGATCTGGAGGAAGCTGTGCGAAGGGCTACCATTGCAAGGAAATTTATACCTGTGTTCATGGGTAGTGCATTTAAAAACAAGGGTGTACAACCACTTTTGAATGGTGTACTTGGTTATTTGCCTTGTCCATGTGAAGTCAGTAACTATGCTCTTGACCAGACTAAGGATGAAGAGAAGGTTATATTAGGTGGAACTCCAGATGGACCTCTTGTAGCATTGGCCTTTAAATTGGAGGAAGGGCGCTTTGGTCAGTTAACCTTTCTAAGAATCTATGAAGGTGTTATACGGAAGGGTGATTTCATTTTTAACATTAACACTGGCAAGAAGATTAAGGTTCCTCGCTTGGTCCGGATGCATTCTGATGAGATGGAGGATATTCAAGAGGCACATGCTGGACAAATAGTCGCTGTATTTGGTGTGGATTGTGCATCAGGAGATACATTTACTGACGGTTCGGTTAAATATACCATGACTTCTATGAATGTCCCTGAGCCAGTGATGTCATTAGCTGTTCAGCCAGTTTCAAAAGATTCAGGAGGACAATTTTCGAAGGCTTTGAATCGTTTTCAGAAAGAAGATCCTACCTTCCGTGTTGGCTTGGACCCTGAGAGCGGACAGACAATCATATCGGGAATGGGAGAGCTGCATTTGGAAGTTTATGTTGAACGCATTCGGAGAGAATATAAGGTTGATGCAACTGTTGGAAAGCCTCGTGTAAACTTCAGAGAGACTGTTACTCAACGTGCTGACTTTGATTATTTACATAAAAAGCAATCTGGAGGACAGGGTCAATATGGGCGAGTAACTGGATTTATCGAACCGCTGCCTGCAGGATCAGCGACAAAGTTTGAATTTGAAAACAGTATTGTGGGACAAGCTATACCATCAAATTTTATCCCAGCTATTGAGAAGGGTTTTAAAGAAGCAGCCAATTCGGGCTCATTAATTGGCCATCCAGTTGAAAATGTTCGCATTGTTTTAACTGATGGTGCTTCCCATGCTGTGGATTCTAGTGAACTTGCCTTCAAATTAGCTGCAATATATGCCTTTAGAAAGTGCTATACGGTGGCAAAGCCGGTGATACTGGAGCCTGTTATGTTGGTGGAGTTGAAAGTACCTACAGAATTTCAGGGCACTGTTGCTGGTGATATTAACAAGAGAAAAGGTGTCATTATTGGAAATGATCAGGAAGGGGATGACTCTGTTATTACAGCCCAAGTCCCTCTGAACAATATGTTTGGCTATTCAACGTCTCTTCGATCAATGACACAGGGAAAAGGCGAATTCACAATGGAGTACAAAGAGCACTCGCCCGTTTCTCATGATGTGCAGGCGCAATTAGTAAACAATTACAAGGGACCGAATGCCACTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003746 GO:0003824 GO:0003924 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006412 GO:0006414 GO:0006518 GO:0006807 GO:0008135 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019538 GO:0030554 GO:0032543 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0042221 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0070125 GO:0071704 GO:0097159 GO:0097367 GO:0140053 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EFG_C EFG_II EFG_IV GTP_EFTU GTP_EFTU_D2

Protein Analysis

753

Amino Acids

83.41

Weight (kDa)

6.01

Isoelectric Point (pI)

36.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	63 - 336	8.9e-61	Elongation factor Tu GTP binding domain
EF-G_D2	PF22042	377 - 445	8.4e-11	Elongation factor G domain 2
GTP_EFTU_D2	PF03144	378 - 444	4.5e-14	Elongation factor Tu domain 2
EFG_III	PF14492	457 - 531	2.6e-29	Elongation Factor G, domain III
EFG_IV	PF03764	532 - 652	6.2e-38	Elongation factor G, domain IV
EFG_C	PF00679	656 - 741	7.7e-26	Elongation factor G C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0012306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45332 AT1G45332 AT2G45030
fragaria_vesca	FvH4_7g10500 FvH4_7g10500 FvH4_7g10500
malus_domestica	MD07G1111000.v1.1
prunus_persica	Prupe.2G134500_v2.0.a1
pyrus_communis	pycom07g09580
rosa_chinensis	RchiOBHm_Chr1g0348291
rosa_laevigata	RLG00000028669
rosa_multiflora	Rmu_sc0027364.1_g000002
rosa_roxburghii	Rroxscaffold_4G00307040
rosa_rugosa	Rorug01G0194100
rosa_samantha	Rh1AG211300 Rh1BG177800 Rh1CG195700 Rh1DG207300
rosa_wichuraiana	Rw1G017850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	572
AccB1I	GGYRCC	1 cut(s)	311
AccB7I	CCANNNNNTGG	1 cut(s)	1888
AccBSI	CCGCTC	1 cut(s)	1497
AccII	CGCG	1 cut(s)	31
AccIII	TCCGGA	1 cut(s)	1233
AclWI	GGATC	4 cut(s)	265, 593, 1457, 1726
AcoI	YGGCCR	2 cut(s)	183, 1834
AcsI	RAATTY	6 cut(s)	249, 926, 1736, 1774, 2009, 2168
AcuI	CTGAAG	2 cut(s)	870, 1591
AcvI	CACGTG	1 cut(s)	143
AcyI	GRCGYC	3 cut(s)	65, 306, 312
AfaI	GTAC	5 cut(s)	507, 972, 993, 2001, 2183
AfiI	CCNNNNNNNGG	4 cut(s)	921, 1048, 1496, 1888
AhdI	GACNNNNNGTC	1 cut(s)	1286
AjiI	CACGTC	1 cut(s)	178
AjnI	CCWGG	2 cut(s)	185, 418
AjuI	GAANNNNNNNTTGG	2 cut(s)	1113, 1145
Alw21I	GWGCWC	1 cut(s)	2193
Alw26I	GTCTC	3 cut(s)	294, 1607, 2142
AlwI	GGATC	4 cut(s)	265, 593, 1457, 1726
Aor13HI	TCCGGA	1 cut(s)	1233
AoxI	GGCC	5 cut(s)	183, 210, 295, 1104, 1834
ApeKI	GCWGC	7 cut(s)	368, 647, 650, 1528, 1708, 1811, 1919
ApoI	RAATTY	6 cut(s)	249, 926, 1736, 1774, 2009, 2168
AseI	ATTAAT	1 cut(s)	1829
Asp700I	GAANNNNTTC	4 cut(s)	765, 855, 1554, 1851
AspLEI	GCGC	4 cut(s)	33, 314, 1128, 2221
AspS9I	GGNCC	6 cut(s)	75, 211, 1088, 1231, 1486, 2243
AsuC2I	CCSGG	1 cut(s)	73
AsuHPI	GGTGA	5 cut(s)	232, 427, 1190, 1975, 2042
AsuII	TTCGAA	1 cut(s)	1433
AvaII	GGWCC	5 cut(s)	75, 1088, 1231, 1486, 2243
BaeGI	GKGCMC	2 cut(s)	873, 2021
BalI	TGGCCA	2 cut(s)	185, 1836
BanI	GGYRCC	1 cut(s)	311
BanII	GRGCYC	1 cut(s)	1826
BarI	GAAGNNNNNNTAC	2 cut(s)	1152, 1184
BauI	CACGAG	3 cut(s)	275, 284, 1596
BbrPI	CACGTG	1 cut(s)	143
BbsI	GAAGAC	1 cut(s)	768
Bbv12I	GWGCWC	1 cut(s)	2193
BbvI	GCAGC	7 cut(s)	355, 634, 637, 1515, 1695, 1823, 1906
BccI	CCATC	8 cut(s)	175, 464, 485, 1079, 1246, 1777, 1845, 1865
BceAI	ACGGC	2 cut(s)	52, 319
BcgI	CGANNNNNNTGC	2 cut(s)	1800, 1834
BciT130I	CCWGG	2 cut(s)	187, 420
BclI	TGATCA	1 cut(s)	2068
BcnI	CCSGG	1 cut(s)	73
BcoDI	GTCTC	3 cut(s)	294, 1607, 2142
BfaI	CTAG	2 cut(s)	738, 1896
BfmI	CTRYAG	2 cut(s)	1713, 2004
BfoI	RGCGCY	2 cut(s)	315, 1129
BglI	GCCNNNNNGGC	1 cut(s)	303
BisI	GCNGC	7 cut(s)	369, 648, 651, 1529, 1709, 1812, 1920
BlsI	GCNGC	7 cut(s)	370, 649, 652, 1530, 1710, 1813, 1921
Bme1390I	CCNGG	3 cut(s)	73, 187, 420
Bme18I	GGWCC	5 cut(s)	75, 1088, 1231, 1486, 2243
BmeRI	GACNNNNNGTC	1 cut(s)	1286
BmgBI	CACGTC	1 cut(s)	178
BmgT120I	GGNCC	6 cut(s)	75, 211, 1088, 1231, 1486, 2243
BmrFI	CCNGG	3 cut(s)	73, 187, 420
BmsI	GCATC	4 cut(s)	649, 1227, 1322, 1567
BpiI	GAAGAC	1 cut(s)	768
BpmI	CTGGAG	4 cut(s)	911, 1065, 1683, 1991
Bpu10I	CCTNAGC	1 cut(s)	1374
Bpu14I	TTCGAA	1 cut(s)	1433
BpuMI	CCSGG	1 cut(s)	73
BsaAI	YACGTR	1 cut(s)	143
BsaHI	GRCGYC	3 cut(s)	65, 306, 312
BsaJI	CCNNGG	4 cut(s)	147, 327, 418, 602
BsaWI	WCCGGW	2 cut(s)	263, 1233
BsaXI	ACNNNNNCTCC	2 cut(s)	152, 182
Bsc4I	CCNNNNNNNGG	4 cut(s)	921, 1048, 1496, 1888
Bse118I	RCCGGY	2 cut(s)	128, 1960
Bse1I	ACTGG	7 cut(s)	849, 1207, 1379, 1403, 1696, 1841, 1974
Bse3DI	GCAATG	2 cut(s)	653, 915
BseAI	TCCGGA	1 cut(s)	1233
BseBI	CCWGG	2 cut(s)	187, 420
BseDI	CCNNGG	4 cut(s)	147, 327, 418, 602
BseGI	GGATG	5 cut(s)	477, 1057, 1242, 1837, 2086
BseLI	CCNNNNNNNGG	4 cut(s)	921, 1048, 1496, 1888
BseMI	GCAATG	2 cut(s)	653, 915
BseMII	CTCAG	2 cut(s)	1365, 1482
BseNI	ACTGG	7 cut(s)	849, 1207, 1379, 1403, 1696, 1841, 1974
BseRI	GAGGAG	3 cut(s)	26, 76, 83
BseSI	GKGCMC	2 cut(s)	873, 2021
BseXI	GCAGC	7 cut(s)	355, 634, 637, 1515, 1695, 1823, 1906
BseYI	CCCAGC	1 cut(s)	1783
BsgI	GTGCAG	3 cut(s)	364, 728, 2234
Bsh1236I	CGCG	1 cut(s)	31
BshFI	GGCC	5 cut(s)	185, 212, 297, 1106, 1836
BshNI	GGYRCC	1 cut(s)	311
BsiHKAI	GWGCWC	1 cut(s)	2193
BsiSI	CCGG	7 cut(s)	73, 129, 225, 264, 637, 1234, 1961
BslFI	GGGAC	6 cut(s)	55, 61, 1355, 1770, 2090, 2256
BslI	CCNNNNNNNGG	4 cut(s)	921, 1048, 1496, 1888
BsmAI	GTCTC	3 cut(s)	294, 1607, 2142
BsmBI	CGTCTC	2 cut(s)	294, 2142
BsmFI	GGGAC	6 cut(s)	55, 61, 1355, 1770, 2090, 2256
BsmI	GAATGC	3 cut(s)	1240, 1554, 2254
BsnI	GGCC	5 cut(s)	185, 212, 297, 1106, 1836
Bsp119I	TTCGAA	1 cut(s)	1433
Bsp1286I	GDGCHC	4 cut(s)	873, 1826, 2021, 2193
Bsp13I	TCCGGA	1 cut(s)	1233
Bsp1407I	TGTACA	2 cut(s)	505, 970
Bsp19I	CCATGG	2 cut(s)	327, 602
BspANI	GGCC	5 cut(s)	185, 212, 297, 1106, 1836
BspCNI	CTCAG	2 cut(s)	1366, 1483
BspEI	TCCGGA	1 cut(s)	1233
BspFNI	CGCG	1 cut(s)	31
BspHI	TCATGA	1 cut(s)	2206
BspMAI	CTGCAG	1 cut(s)	1717
BspPI	GGATC	4 cut(s)	265, 593, 1457, 1726
BspT104I	TTCGAA	1 cut(s)	1433
BspT107I	GGYRCC	1 cut(s)	311
BsrBI	CCGCTC	1 cut(s)	1497
BsrDI	GCAATG	2 cut(s)	653, 915
BsrFI	RCCGGY	2 cut(s)	128, 1960
BsrGI	TGTACA	2 cut(s)	505, 970
BsrI	ACTGG	7 cut(s)	849, 1207, 1379, 1403, 1696, 1841, 1974
BssAI	RCCGGY	2 cut(s)	128, 1960
BssECI	CCNNGG	4 cut(s)	147, 327, 418, 602
BssNI	GRCGYC	3 cut(s)	65, 306, 312
BssSI	CACGAG	3 cut(s)	275, 284, 1596
BssT1I	CCWWGG	3 cut(s)	147, 327, 602
Bst2BI	CACGAG	3 cut(s)	275, 284, 1596
Bst2UI	CCWGG	2 cut(s)	187, 420
Bst4CI	ACNGT	7 cut(s)	526, 1337, 1585, 1618, 1748, 1951, 2023
Bst6I	CTCTTC	2 cut(s)	1050, 2145
BstACI	GRCGYC	3 cut(s)	65, 306, 312
BstAPI	GCANNNNNTGC	1 cut(s)	1928
BstAUI	TGTACA	2 cut(s)	505, 970
BstBAI	YACGTR	1 cut(s)	143
BstBI	TTCGAA	1 cut(s)	1433
BstC8I	GCNNGC	3 cut(s)	130, 1713, 2217
BstDEI	CTNAG	5 cut(s)	630, 1047, 1148, 1374, 1491
BstDSI	CCRYGG	2 cut(s)	327, 602
BstF5I	GGATG	5 cut(s)	477, 1057, 1242, 1837, 2086
BstFNI	CGCG	1 cut(s)	31
BstH2I	RGCGCY	2 cut(s)	315, 1129
BstHHI	GCGC	4 cut(s)	33, 314, 1128, 2221
BstMAI	GTCTC	3 cut(s)	294, 1607, 2142
BstMWI	GCNNNNNNNGC	7 cut(s)	15, 303, 791, 917, 1721, 1883, 1928
BstNI	CCWGG	2 cut(s)	187, 420
BstNSI	RCATGY	1 cut(s)	1277
BstSCI	CCNGG	3 cut(s)	71, 185, 418
BstSFI	CTRYAG	2 cut(s)	1713, 2004
BstSLI	GKGCMC	2 cut(s)	873, 2021
BstUI	CGCG	1 cut(s)	31
BstV1I	GCAGC	7 cut(s)	355, 634, 637, 1515, 1695, 1823, 1906
BstV2I	GAAGAC	1 cut(s)	768
BstX2I	RGATCY	3 cut(s)	270, 598, 1462
BstXI	CCANNNNNNTGG	1 cut(s)	334
BstYI	RGATCY	3 cut(s)	270, 598, 1462
BsuRI	GGCC	5 cut(s)	185, 212, 297, 1106, 1836
BtgI	CCRYGG	2 cut(s)	327, 602
BtrI	CACGTC	1 cut(s)	178
BtsCI	GGATG	5 cut(s)	477, 1057, 1242, 1837, 2086
BtsIMutI	CAGTG	4 cut(s)	1200, 1386, 2019, 2253
Cac8I	GCNNGC	3 cut(s)	130, 1713, 2217
CciI	TCATGA	1 cut(s)	2206
CfoI	GCGC	4 cut(s)	33, 314, 1128, 2221
Cfr10I	RCCGGY	2 cut(s)	128, 1960
Cfr13I	GGNCC	6 cut(s)	75, 211, 1088, 1231, 1486, 2243
CseI	GACGC	2 cut(s)	73, 295
Csp6I	GTAC	5 cut(s)	506, 971, 992, 2000, 2182
CviQI	GTAC	5 cut(s)	506, 971, 992, 2000, 2182
DdeI	CTNAG	5 cut(s)	630, 1047, 1148, 1374, 1491
DinI	GGCGCC	1 cut(s)	313
DraI	TTTAAA	3 cut(s)	958, 1111, 1804
DriI	GACNNNNNGTC	1 cut(s)	1286
EaeI	YGGCCR	2 cut(s)	183, 1834
Eam1104I	CTCTTC	2 cut(s)	1050, 2145
Eam1105I	GACNNNNNGTC	1 cut(s)	1286
EarI	CTCTTC	2 cut(s)	1050, 2145
EciI	GGCGGA	2 cut(s)	104, 115
Eco130I	CCWWGG	3 cut(s)	147, 327, 602
Eco24I	GRGCYC	1 cut(s)	1826
Eco47I	GGWCC	5 cut(s)	75, 1088, 1231, 1486, 2243
Eco57I	CTGAAG	2 cut(s)	870, 1591
Eco72I	CACGTG	1 cut(s)	143
EcoRI	GAATTC	2 cut(s)	249, 2168
EcoRII	CCWGG	2 cut(s)	185, 418
EcoT14I	CCWWGG	3 cut(s)	147, 327, 602
EcoT22I	ATGCAT	1 cut(s)	1242
EcoT38I	GRGCYC	1 cut(s)	1826
EgeI	GGCGCC	1 cut(s)	313
EheI	GGCGCC	1 cut(s)	313
ErhI	CCWWGG	3 cut(s)	147, 327, 602
Esp3I	CGTCTC	2 cut(s)	294, 2142
FalI	AAGNNNNNCTT	2 cut(s)	843, 875
FaqI	GGGAC	6 cut(s)	55, 61, 1355, 1770, 2090, 2256
FauI	CCCGC	3 cut(s)	14, 36, 87
FbaI	TGATCA	1 cut(s)	2068
Fnu4HI	GCNGC	7 cut(s)	369, 648, 651, 1529, 1709, 1812, 1920
FokI	GGATG	5 cut(s)	464, 1064, 1249, 1824, 2093
FriOI	GRGCYC	1 cut(s)	1826
Fsp4HI	GCNGC	7 cut(s)	369, 648, 651, 1529, 1709, 1812, 1920
FspBI	CTAG	2 cut(s)	738, 1896
GlaI	GCGC	4 cut(s)	32, 313, 1127, 2220
GluI	GCNGC	7 cut(s)	369, 648, 651, 1529, 1709, 1812, 1920
GsaI	CCCAGC	1 cut(s)	1787
GsuI	CTGGAG	4 cut(s)	911, 1065, 1683, 1991
HaeII	RGCGCY	2 cut(s)	315, 1129
HaeIII	GGCC	5 cut(s)	185, 212, 297, 1106, 1836
HapII	CCGG	7 cut(s)	73, 129, 225, 264, 637, 1234, 1961
HgaI	GACGC	2 cut(s)	73, 295
HhaI	GCGC	4 cut(s)	33, 314, 1128, 2221
Hin1I	GRCGYC	3 cut(s)	65, 306, 312
Hin6I	GCGC	4 cut(s)	31, 312, 1126, 2219
HinP1I	GCGC	4 cut(s)	31, 312, 1126, 2219
HincII	GTYRAC	1 cut(s)	1140
HindII	GTYRAC	1 cut(s)	1140
HindIII	AAGCTT	1 cut(s)	717
HpaI	GTTAAC	1 cut(s)	1140
HpaII	CCGG	7 cut(s)	73, 129, 225, 264, 637, 1234, 1961
HphI	GGTGA	5 cut(s)	232, 427, 1190, 1975, 2042
Hpy166II	GTNNAC	8 cut(s)	171, 506, 971, 992, 1140, 1603, 1901, 2230
Hpy8I	GTNNAC	8 cut(s)	171, 506, 971, 992, 1140, 1603, 1901, 2230
Hpy99I	CGWCG	3 cut(s)	67, 101, 311
HpyCH4III	ACNGT	7 cut(s)	526, 1337, 1585, 1618, 1748, 1951, 2023
HpyCH4IV	ACGT	5 cut(s)	142, 177, 426, 1627, 2135
HpyF10VI	GCNNNNNNNGC	7 cut(s)	15, 303, 791, 917, 1721, 1883, 1928
HpyF3I	CTNAG	5 cut(s)	630, 1047, 1148, 1374, 1491
HpySE526I	ACGT	5 cut(s)	142, 177, 426, 1627, 2135
Hsp92I	GRCGYC	3 cut(s)	65, 306, 312
HspAI	GCGC	4 cut(s)	31, 312, 1126, 2219
KasI	GGCGCC	1 cut(s)	311
Kpn2I	TCCGGA	1 cut(s)	1233
KroI	GCCGGC	1 cut(s)	128
KroNI	GCCGGC	1 cut(s)	130
Ksp22I	TGATCA	1 cut(s)	2068
KspAI	GTTAAC	1 cut(s)	1140
LmnI	GCTCC	7 cut(s)	107, 160, 195, 473, 593, 639, 1972
Lsp1109I	GCAGC	7 cut(s)	355, 634, 637, 1515, 1695, 1823, 1906
LweI	GCATC	4 cut(s)	649, 1227, 1322, 1567
MaeI	CTAG	2 cut(s)	738, 1896
MaeII	ACGT	5 cut(s)	142, 177, 426, 1627, 2135
MaeIII	GTNAC	4 cut(s)	422, 1025, 1618, 1687
MbiI	CCGCTC	1 cut(s)	1497
MboII	GAAGA	7 cut(s)	689, 773, 875, 1067, 1222, 1472, 2132
MflI	RGATCY	3 cut(s)	270, 598, 1462
MhlI	GDGCHC	4 cut(s)	873, 1826, 2021, 2193
MlsI	TGGCCA	2 cut(s)	185, 1836
MluNI	TGGCCA	2 cut(s)	185, 1836
Mly113I	GGCGCC	1 cut(s)	312
MlyI	GAGTC	4 cut(s)	215, 317, 520, 2078
MmeI	TCCRAC	2 cut(s)	654, 1567
Mox20I	TGGCCA	2 cut(s)	185, 1836
Mph1103I	ATGCAT	1 cut(s)	1242
MroI	TCCGGA	1 cut(s)	1233
MroNI	GCCGGC	1 cut(s)	128
MroXI	GAANNNNTTC	4 cut(s)	765, 855, 1554, 1851
MscI	TGGCCA	2 cut(s)	185, 1836
MslI	CAYNNNNRTG	1 cut(s)	1245
Msp20I	TGGCCA	2 cut(s)	185, 1836
MspA1I	CMGCKG	2 cut(s)	368, 1708
MspI	CCGG	7 cut(s)	73, 129, 225, 264, 637, 1234, 1961
MspR9I	CCNGG	3 cut(s)	73, 187, 420
Mva1269I	GAATGC	3 cut(s)	1240, 1554, 2254
MvaI	CCWGG	2 cut(s)	187, 420
MvnI	CGCG	1 cut(s)	31
MwoI	GCNNNNNNNGC	7 cut(s)	15, 303, 791, 917, 1721, 1883, 1928
NaeI	GCCGGC	1 cut(s)	130
NarI	GGCGCC	1 cut(s)	312
NciI	CCSGG	1 cut(s)	73
NcoI	CCATGG	2 cut(s)	327, 602
NgoMIV	GCCGGC	1 cut(s)	128
NmeAIII	GCCGAG	2 cut(s)	188, 323
NmuCI	GTSAC	1 cut(s)	422
NsiI	ATGCAT	1 cut(s)	1242
NspI	RCATGY	1 cut(s)	1277
NspV	TTCGAA	1 cut(s)	1433
PagI	TCATGA	1 cut(s)	2206
PcsI	WCGNNNNNNNCGW	1 cut(s)	282
PctI	GAATGC	3 cut(s)	1240, 1554, 2254
PdiI	GCCGGC	1 cut(s)	130
PdmI	GAANNNNTTC	4 cut(s)	765, 855, 1554, 1851
PfeI	GAWTC	7 cut(s)	204, 280, 616, 1152, 1415, 1444, 1892
PflFI	GACNNNGTC	3 cut(s)	67, 305, 1671
PflMI	CCANNNNNTGG	1 cut(s)	1888
PkrI	GCNGC	7 cut(s)	370, 649, 652, 1530, 1710, 1813, 1921
PleI	GAGTC	4 cut(s)	215, 317, 519, 2078
PluTI	GGCGCC	1 cut(s)	315
PmaCI	CACGTG	1 cut(s)	143
PmlI	CACGTG	1 cut(s)	143
PpsI	GAGTC	4 cut(s)	215, 317, 519, 2078
Ppu21I	YACGTR	1 cut(s)	143
PshBI	ATTAAT	1 cut(s)	1829
PsiI	TTATAA	1 cut(s)	572
Psp6I	CCWGG	2 cut(s)	185, 418
PspCI	CACGTG	1 cut(s)	143
PspFI	CCCAGC	1 cut(s)	1783
PspGI	CCWGG	2 cut(s)	185, 418
PspPI	GGNCC	6 cut(s)	75, 211, 1088, 1231, 1486, 2243
PstI	CTGCAG	1 cut(s)	1717
PsuI	RGATCY	3 cut(s)	270, 598, 1462
PsyI	GACNNNGTC	3 cut(s)	67, 305, 1671
RsaI	GTAC	5 cut(s)	507, 972, 993, 2001, 2183
RsaNI	GTAC	5 cut(s)	506, 971, 992, 2000, 2182
RseI	CAYNNNNRTG	1 cut(s)	1245
SatI	GCNGC	7 cut(s)	369, 648, 651, 1529, 1709, 1812, 1920
Sau96I	GGNCC	6 cut(s)	75, 211, 1088, 1231, 1486, 2243
SbfI	CCTGCAGG	1 cut(s)	1717
SchI	GAGTC	4 cut(s)	215, 317, 520, 2078
ScrFI	CCNGG	3 cut(s)	73, 187, 420
SdaI	CCTGCAGG	1 cut(s)	1717
SduI	GDGCHC	4 cut(s)	873, 1826, 2021, 2193
SfaNI	GCATC	4 cut(s)	649, 1227, 1322, 1567
SfcI	CTRYAG	2 cut(s)	1713, 2004
SfoI	GGCGCC	1 cut(s)	313
SfuI	TTCGAA	1 cut(s)	1433
SinI	GGWCC	5 cut(s)	75, 1088, 1231, 1486, 2243
SmiMI	CAYNNNNRTG	1 cut(s)	1245
Sse8387I	CCTGCAGG	1 cut(s)	1717
SspDI	GGCGCC	1 cut(s)	311
SspMI	CTAG	2 cut(s)	738, 1896
StyD4I	CCNGG	3 cut(s)	71, 185, 418
StyI	CCWWGG	3 cut(s)	147, 327, 602
TaaI	ACNGT	7 cut(s)	526, 1337, 1585, 1618, 1748, 1951, 2023
TaiI	ACGT	5 cut(s)	145, 180, 429, 1630, 2138
TaqI	TCGA	5 cut(s)	219, 586, 1433, 1701, 2143
TaqII	GACCGA	1 cut(s)	2260
TatI	WGTACW	4 cut(s)	505, 970, 991, 2181
TfiI	GAWTC	7 cut(s)	204, 280, 616, 1152, 1415, 1444, 1892
TscAI	CASTG	4 cut(s)	1207, 1386, 2026, 2260
TseFI	GTSAC	1 cut(s)	422
TseI	GCWGC	7 cut(s)	368, 647, 650, 1528, 1708, 1811, 1919
Tsp45I	GTSAC	1 cut(s)	422
TspDTI	ATGAA	7 cut(s)	554, 719, 931, 1068, 1173, 1174, 1379
TspGWI	ACGGA	3 cut(s)	188, 1186, 1463
TspRI	CASTG	4 cut(s)	1207, 1386, 2026, 2260
Tth111I	GACNNNGTC	3 cut(s)	67, 305, 1671
Van91I	CCANNNNNTGG	1 cut(s)	1888
VpaK11BI	GGWCC	5 cut(s)	75, 1088, 1231, 1486, 2243
VspI	ATTAAT	1 cut(s)	1829
XapI	RAATTY	6 cut(s)	249, 926, 1736, 1774, 2009, 2168
XceI	RCATGY	1 cut(s)	1277
XmnI	GAANNNNTTC	4 cut(s)	765, 855, 1554, 1851
XspI	CTAG	2 cut(s)	738, 1896
Zsp2I	ATGCAT	1 cut(s)	1242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.