Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0012306

Physical Location & Seq

Genomic Coordinates Forward (+)

39513683 .. 39522428

Gene Structure 8746 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G017850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGCCCCGCTTCCCTCGCTTCTCCACCCCGCGCCTCCTCTACTCCCTCCACACCTCCAAAACGACGCCGTCCCCGTCCCCGTCCTCCTCTCTCCTCCTCGGCTCCTTCCACCTCCGCCAATTCTCCGCCGGCAACCTCGCACGTGCCAAGGACGACAAGGAGCTATGGTGGACGGACGTGATGGCCAGGCTCCGCAACATCGGAATCTCGGCCCATATCGACTCCGGCAAGACCACTCTCACCGAGAGAATTCTCTACTACACCGGAAAGATCCACGAGATTCACGAGGTCAGAGGCCGAGACGGCAGAGAAGGAATTACCATTCAGTCCGCTGCCACTTACTGCACTTGGAATGGTTATCAGATTAACATAATTGACACCCCTGGTCACGTTGATTTCACCATTGAGGTTGAGAGAGCTTTGCGTGTTCTTGATGGAGCCATCCTTGTCCTTTGTAGCGTTGGTGGTGTACAGAGTCAGTCAATTACTGTTGATCGGCAAATGAAAAGATACGAGGTTCCAAGAATTGCATTTATAAACAAACTTGATCGAATGGGAGCAGATCCATGGAAAGTTCTGAATCAGATGAGGTCTAAGCTCCGGCATCATGCTGCTGCATTGCAACTTCCTATTGGGTTGGAAGATGATTTTAAGGGTCTTATTGATCTTGTGCAGTTAAAAGCTTTGTATTTTCATGGTTCTAGCGGTCAGGAAATTGTCATTGAAGACATTCCTTCTGATATGGAGGCGTTAGTCGCAGAAAAAAGGCGAGAGCTAATTGAAATTGTTTCCGAAGTTGATGACCAACTGGCTGAAGCATTTCTTGAAGATGTGCCCATTACACCTACTGATCTGGAGGAAGCTGTGCGAAGGGCTACCATTGCAAGGAAATTTATACCTGTGTTCATGGGTAGTGCATTTAAAAACAAGGGTGTACAACCACTTTTGAATGGTGTACTTGGTTATTTGCCTTGTCCATCTGAAGTCAGTAACTATGCTCTTGACCAGACTAAGGATGAAGATAAGGTTATATTAGGTGGAACTCCAGATGGACCTCTTGTAGCATTGGCCTTTAAATTGGAGGAAGGGCGCTTTGGTCAGTTAACCTTTCTAAGAATCTATGAAGGTGTTATACGGAAGGGTGATTTCATTTTTAACATTAACACTGGCAAGAAGATTAAGGTTCCTCGCTTGGTCCGGATGCATTCTGATGAGATGGAGGATATTCAAGAGGCACATGCTGGACAAATAGTCGCTGTATTTGGTGTGGATTGTGCATCAGGAGATACATTTACTGACGGTTCGGTTAAATATACCATGACTTCTATGAATGTCCCTGAGCCAGTGATGTCATTAGCTGTTCAGCCAGTTTCAAAAGATTCAGGAGGACAATTTTCGAAGGCTTTGAATCGTTTTCAGAAAGAAGATCCTACCTTCCGTGTTGGCTTGGACCCTGAGAGCGGACAGACAATCATATCGGGAATGGGAGAGCTGCATTTGGAAGTTTATGTTGAACGCATTCGGAGAGAATATAAGGTTGATGCAACTGTTGGAAAGCCTCGTGTAAACTTCAGAGAGACTGTTACTCAACGTGCTGACTTTGATTATTTACATAAAAAGCAATCTGGAGGACAGGGTCAATATGGGCGAGTAACTGGATTTATCGAACCGCTGCCTGCAGGATCAGCGACAAAGTTTGAATTTGAAAACAGTATTGTGGGACAAGCTATACCATCAAATTTTATCCCAGCTATTGAGAAGGGTTTTAAAGAAGCAGCCAATTCGGGCTCATTAATTGGCCATCCAGTTGAAAATGTTCGCATTGTTTTAACTGATGGTGCTTCCCATGCTGTGGATTCTAGTGAACTTGCTTTCAAATTAGCTGCAATATATGCCTTTAGAAAGTGCTATACGGTGGCAAAGCCGGTGATACTGGAGCCTGTTATGTTGGTGGAGTTGAAAGTACCTACAGAATTTCAGGGCACTGTTGCTGGTGATATTAACAAGAGAAAAGGTGTCATTATTGGAAATGATCAGGAAGGGGATGACTCTGTTATTACAGCCCAAGTCCCTCTGAACAATATGTTTGGCTATTCAACGTCTCTTCGATCAATGACACAGGGAAAAGGCGAATTCACAATGGAGTACAAAGAGCACTCGCCCGTTTCTCATGATGTGCAGGCGCAATTAGTAAACAATTACAAGGGACCGAATGCCACCGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003746 GO:0003824 GO:0003924 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006412 GO:0006414 GO:0006518 GO:0006807 GO:0008135 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019538 GO:0030554 GO:0032543 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0042221 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0070125 GO:0071704 GO:0097159 GO:0097367 GO:0140053 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EFG_C EFG_II EFG_IV GTP_EFTU GTP_EFTU_D2

Protein Analysis

741

Amino Acids

82.02

Weight (kDa)

6.01

Isoelectric Point (pI)

37.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	63 - 324	1.7e-52	Elongation factor Tu GTP binding domain
EF-G_D2	PF22042	365 - 433	8.2e-11	Elongation factor G domain 2
GTP_EFTU_D2	PF03144	366 - 432	4.4e-14	Elongation factor Tu domain 2
EFG_III	PF14492	445 - 519	2.5e-29	Elongation Factor G, domain III
EFG_IV	PF03764	520 - 640	6.1e-38	Elongation factor G, domain IV
EFG_C	PF00679	644 - 729	7.6e-26	Elongation factor G C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45332 AT1G45332 AT2G45030
fragaria_vesca	FvH4_7g10500 FvH4_7g10500 FvH4_7g10500
malus_domestica	MD07G1111000.v1.1
prunus_persica	Prupe.2G134500_v2.0.a1
pyrus_communis	pycom07g09580
rosa_chinensis	RchiOBHm_Chr1g0348291
rosa_laevigata	RLG00000028669
rosa_multiflora	Rmu_sc0027364.1_g000002
rosa_roxburghii	Rroxscaffold_4G00307040
rosa_rugosa	Rorug01G0194100
rosa_samantha	Rh1AG211300 Rh1BG177800 Rh1CG195700 Rh1DG207300
rosa_wichuraiana	Rw1G017850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	536
AccB7I	CCANNNNNTGG	1 cut(s)	1852
AccBSI	CCGCTC	1 cut(s)	1461
AccII	CGCG	1 cut(s)	31
AccIII	TCCGGA	1 cut(s)	1197
AciI	CCGC	9 cut(s)	7, 29, 115, 126, 193, 330, 705, 1461, 1670
AclWI	GGATC	4 cut(s)	265, 557, 1421, 1690
AcoI	YGGCCR	2 cut(s)	183, 1798
AcsI	RAATTY	6 cut(s)	249, 890, 1700, 1738, 1973, 2132
AcuI	CTGAAG	3 cut(s)	834, 1002, 1555
AcvI	CACGTG	1 cut(s)	143
AcyI	GRCGYC	1 cut(s)	65
AfaI	GTAC	5 cut(s)	471, 936, 957, 1965, 2147
AfiI	CCNNNNNNNGG	4 cut(s)	885, 1012, 1460, 1852
AhdI	GACNNNNNGTC	1 cut(s)	1250
AjiI	CACGTC	1 cut(s)	178
AjnI	CCWGG	2 cut(s)	185, 382
AjuI	GAANNNNNNNTTGG	2 cut(s)	1077, 1109
Alw21I	GWGCWC	1 cut(s)	2157
Alw26I	GTCTC	3 cut(s)	294, 1571, 2106
AlwI	GGATC	4 cut(s)	265, 557, 1421, 1690
Aor13HI	TCCGGA	1 cut(s)	1197
AoxI	GGCC	5 cut(s)	183, 210, 295, 1068, 1798
ApeKI	GCWGC	7 cut(s)	332, 611, 614, 1492, 1672, 1775, 1883
ApoI	RAATTY	6 cut(s)	249, 890, 1700, 1738, 1973, 2132
AseI	ATTAAT	1 cut(s)	1793
Asp700I	GAANNNNTTC	4 cut(s)	729, 819, 1518, 1815
AspLEI	GCGC	3 cut(s)	33, 1092, 2185
AspS9I	GGNCC	5 cut(s)	211, 1052, 1195, 1450, 2207
AsuHPI	GGTGA	5 cut(s)	232, 391, 1154, 1939, 2006
AsuII	TTCGAA	1 cut(s)	1397
AvaII	GGWCC	4 cut(s)	1052, 1195, 1450, 2207
BaeGI	GKGCMC	2 cut(s)	837, 1985
BalI	TGGCCA	2 cut(s)	185, 1800
BanII	GRGCYC	1 cut(s)	1790
BarI	GAAGNNNNNNTAC	2 cut(s)	1116, 1148
BauI	CACGAG	3 cut(s)	275, 284, 1560
BbrPI	CACGTG	1 cut(s)	143
BbsI	GAAGAC	1 cut(s)	732
Bbv12I	GWGCWC	1 cut(s)	2157
BbvI	GCAGC	7 cut(s)	319, 598, 601, 1479, 1659, 1787, 1870
BccI	CCATC	9 cut(s)	175, 428, 449, 985, 1043, 1210, 1741, 1809, 1829
BceAI	ACGGC	2 cut(s)	52, 319
BcgI	CGANNNNNNTGC	2 cut(s)	1764, 1798
BciT130I	CCWGG	2 cut(s)	187, 384
BclI	TGATCA	1 cut(s)	2032
BcoDI	GTCTC	3 cut(s)	294, 1571, 2106
BfaI	CTAG	2 cut(s)	702, 1860
BfmI	CTRYAG	2 cut(s)	1677, 1968
BfoI	RGCGCY	1 cut(s)	1093
BglI	GCCNNNNNGGC	1 cut(s)	303
BisI	GCNGC	7 cut(s)	333, 612, 615, 1493, 1673, 1776, 1884
BlsI	GCNGC	7 cut(s)	334, 613, 616, 1494, 1674, 1777, 1885
Bme1390I	CCNGG	2 cut(s)	187, 384
Bme18I	GGWCC	4 cut(s)	1052, 1195, 1450, 2207
BmeRI	GACNNNNNGTC	1 cut(s)	1250
BmgBI	CACGTC	1 cut(s)	178
BmgT120I	GGNCC	5 cut(s)	211, 1052, 1195, 1450, 2207
BmiI	GGNNCC	8 cut(s)	103, 191, 439, 519, 1185, 1452, 1938, 2208
BmrFI	CCNGG	2 cut(s)	187, 384
BmsI	GCATC	4 cut(s)	613, 1191, 1286, 1531
BpiI	GAAGAC	1 cut(s)	732
BpmI	CTGGAG	4 cut(s)	875, 1029, 1647, 1955
Bpu10I	CCTNAGC	1 cut(s)	1338
Bpu14I	TTCGAA	1 cut(s)	1397
BsaAI	YACGTR	1 cut(s)	143
BsaHI	GRCGYC	1 cut(s)	65
BsaJI	CCNNGG	4 cut(s)	97, 147, 382, 566
BsaWI	WCCGGW	2 cut(s)	263, 1197
BsaXI	ACNNNNNCTCC	2 cut(s)	152, 182
Bsc4I	CCNNNNNNNGG	4 cut(s)	885, 1012, 1460, 1852
Bse118I	RCCGGY	2 cut(s)	128, 1924
Bse1I	ACTGG	7 cut(s)	813, 1171, 1343, 1367, 1660, 1805, 1938
Bse3DI	GCAATG	2 cut(s)	617, 879
BseAI	TCCGGA	1 cut(s)	1197
BseBI	CCWGG	2 cut(s)	187, 384
BseDI	CCNNGG	4 cut(s)	97, 147, 382, 566
BseGI	GGATG	5 cut(s)	441, 1021, 1206, 1801, 2050
BseLI	CCNNNNNNNGG	4 cut(s)	885, 1012, 1460, 1852
BseMI	GCAATG	2 cut(s)	617, 879
BseMII	CTCAG	2 cut(s)	1329, 1446
BseNI	ACTGG	7 cut(s)	813, 1171, 1343, 1367, 1660, 1805, 1938
BseRI	GAGGAG	4 cut(s)	26, 76, 83, 86
BseSI	GKGCMC	2 cut(s)	837, 1985
BseXI	GCAGC	7 cut(s)	319, 598, 601, 1479, 1659, 1787, 1870
BseYI	CCCAGC	1 cut(s)	1747
BsgI	GTGCAG	3 cut(s)	328, 692, 2198
Bsh1236I	CGCG	1 cut(s)	31
BshFI	GGCC	5 cut(s)	185, 212, 297, 1070, 1800
BsiHKAI	GWGCWC	1 cut(s)	2157
BsiSI	CCGG	6 cut(s)	129, 225, 264, 601, 1198, 1925
BslFI	GGGAC	6 cut(s)	55, 61, 1319, 1734, 2054, 2220
BslI	CCNNNNNNNGG	4 cut(s)	885, 1012, 1460, 1852
BsmAI	GTCTC	3 cut(s)	294, 1571, 2106
BsmBI	CGTCTC	2 cut(s)	294, 2106
BsmFI	GGGAC	6 cut(s)	55, 61, 1319, 1734, 2054, 2220
BsmI	GAATGC	3 cut(s)	1204, 1518, 2218
BsnI	GGCC	5 cut(s)	185, 212, 297, 1070, 1800
Bsp119I	TTCGAA	1 cut(s)	1397
Bsp1286I	GDGCHC	4 cut(s)	837, 1790, 1985, 2157
Bsp13I	TCCGGA	1 cut(s)	1197
Bsp1407I	TGTACA	2 cut(s)	469, 934
Bsp19I	CCATGG	1 cut(s)	566
BspACI	CCGC	9 cut(s)	7, 29, 115, 126, 193, 330, 705, 1461, 1670
BspANI	GGCC	5 cut(s)	185, 212, 297, 1070, 1800
BspCNI	CTCAG	2 cut(s)	1330, 1447
BspEI	TCCGGA	1 cut(s)	1197
BspFNI	CGCG	1 cut(s)	31
BspHI	TCATGA	1 cut(s)	2170
BspLI	GGNNCC	8 cut(s)	103, 191, 439, 519, 1185, 1452, 1938, 2208
BspMAI	CTGCAG	1 cut(s)	1681
BspPI	GGATC	4 cut(s)	265, 557, 1421, 1690
BspT104I	TTCGAA	1 cut(s)	1397
BsrBI	CCGCTC	1 cut(s)	1461
BsrDI	GCAATG	2 cut(s)	617, 879
BsrFI	RCCGGY	2 cut(s)	128, 1924
BsrGI	TGTACA	2 cut(s)	469, 934
BsrI	ACTGG	7 cut(s)	813, 1171, 1343, 1367, 1660, 1805, 1938
BssAI	RCCGGY	2 cut(s)	128, 1924
BssECI	CCNNGG	4 cut(s)	97, 147, 382, 566
BssNI	GRCGYC	1 cut(s)	65
BssSI	CACGAG	3 cut(s)	275, 284, 1560
BssT1I	CCWWGG	2 cut(s)	147, 566
Bst2BI	CACGAG	3 cut(s)	275, 284, 1560
Bst2UI	CCWGG	2 cut(s)	187, 384
Bst4CI	ACNGT	7 cut(s)	490, 1301, 1549, 1582, 1712, 1915, 1987
Bst6I	CTCTTC	1 cut(s)	2109
BstACI	GRCGYC	1 cut(s)	65
BstAPI	GCANNNNNTGC	1 cut(s)	1892
BstAUI	TGTACA	2 cut(s)	469, 934
BstBAI	YACGTR	1 cut(s)	143
BstBI	TTCGAA	1 cut(s)	1397
BstC8I	GCNNGC	3 cut(s)	130, 1677, 2181
BstDEI	CTNAG	5 cut(s)	594, 1011, 1112, 1338, 1455
BstDSI	CCRYGG	1 cut(s)	566
BstF5I	GGATG	5 cut(s)	441, 1021, 1206, 1801, 2050
BstFNI	CGCG	1 cut(s)	31
BstH2I	RGCGCY	1 cut(s)	1093
BstHHI	GCGC	3 cut(s)	33, 1092, 2185
BstMAI	GTCTC	3 cut(s)	294, 1571, 2106
BstMWI	GCNNNNNNNGC	7 cut(s)	15, 303, 755, 881, 1685, 1847, 1892
BstNI	CCWGG	2 cut(s)	187, 384
BstNSI	RCATGY	1 cut(s)	1241
BstSCI	CCNGG	2 cut(s)	185, 382
BstSFI	CTRYAG	2 cut(s)	1677, 1968
BstSLI	GKGCMC	2 cut(s)	837, 1985
BstUI	CGCG	1 cut(s)	31
BstV1I	GCAGC	7 cut(s)	319, 598, 601, 1479, 1659, 1787, 1870
BstV2I	GAAGAC	1 cut(s)	732
BstX2I	RGATCY	3 cut(s)	270, 562, 1426
BstYI	RGATCY	3 cut(s)	270, 562, 1426
BsuRI	GGCC	5 cut(s)	185, 212, 297, 1070, 1800
BtgI	CCRYGG	1 cut(s)	566
BtrI	CACGTC	1 cut(s)	178
BtsCI	GGATG	5 cut(s)	441, 1021, 1206, 1801, 2050
BtsIMutI	CAGTG	3 cut(s)	1164, 1350, 1983
Cac8I	GCNNGC	3 cut(s)	130, 1677, 2181
CciI	TCATGA	1 cut(s)	2170
CfoI	GCGC	3 cut(s)	33, 1092, 2185
Cfr10I	RCCGGY	2 cut(s)	128, 1924
Cfr13I	GGNCC	5 cut(s)	211, 1052, 1195, 1450, 2207
CseI	GACGC	1 cut(s)	73
Csp6I	GTAC	5 cut(s)	470, 935, 956, 1964, 2146
CviAII	CATG	8 cut(s)	567, 608, 695, 907, 1238, 1318, 1847, 2171
CviQI	GTAC	5 cut(s)	470, 935, 956, 1964, 2146
DdeI	CTNAG	5 cut(s)	594, 1011, 1112, 1338, 1455
DraI	TTTAAA	3 cut(s)	922, 1075, 1768
DriI	GACNNNNNGTC	1 cut(s)	1250
EaeI	YGGCCR	2 cut(s)	183, 1798
Eam1104I	CTCTTC	1 cut(s)	2109
Eam1105I	GACNNNNNGTC	1 cut(s)	1250
EarI	CTCTTC	1 cut(s)	2109
EciI	GGCGGA	2 cut(s)	104, 115
Eco130I	CCWWGG	2 cut(s)	147, 566
Eco24I	GRGCYC	1 cut(s)	1790
Eco47I	GGWCC	4 cut(s)	1052, 1195, 1450, 2207
Eco57I	CTGAAG	3 cut(s)	834, 1002, 1555
Eco72I	CACGTG	1 cut(s)	143
EcoRI	GAATTC	2 cut(s)	249, 2132
EcoRII	CCWGG	2 cut(s)	185, 382
EcoT14I	CCWWGG	2 cut(s)	147, 566
EcoT22I	ATGCAT	1 cut(s)	1206
EcoT38I	GRGCYC	1 cut(s)	1790
ErhI	CCWWGG	2 cut(s)	147, 566
Esp3I	CGTCTC	2 cut(s)	294, 2106
FaeI	CATG	8 cut(s)	570, 611, 698, 910, 1241, 1321, 1850, 2174
FalI	AAGNNNNNCTT	2 cut(s)	807, 839
FaqI	GGGAC	6 cut(s)	55, 61, 1319, 1734, 2054, 2220
FatI	CATG	8 cut(s)	566, 607, 694, 906, 1237, 1317, 1846, 2170
FauI	CCCGC	2 cut(s)	14, 36
FbaI	TGATCA	1 cut(s)	2032
Fnu4HI	GCNGC	7 cut(s)	333, 612, 615, 1493, 1673, 1776, 1884
FokI	GGATG	5 cut(s)	428, 1028, 1213, 1788, 2057
FriOI	GRGCYC	1 cut(s)	1790
Fsp4HI	GCNGC	7 cut(s)	333, 612, 615, 1493, 1673, 1776, 1884
FspBI	CTAG	2 cut(s)	702, 1860
GlaI	GCGC	3 cut(s)	32, 1091, 2184
GluI	GCNGC	7 cut(s)	333, 612, 615, 1493, 1673, 1776, 1884
GsaI	CCCAGC	1 cut(s)	1751
GsuI	CTGGAG	4 cut(s)	875, 1029, 1647, 1955
HaeII	RGCGCY	1 cut(s)	1093
HaeIII	GGCC	5 cut(s)	185, 212, 297, 1070, 1800
HapII	CCGG	6 cut(s)	129, 225, 264, 601, 1198, 1925
HgaI	GACGC	1 cut(s)	73
HhaI	GCGC	3 cut(s)	33, 1092, 2185
Hin1I	GRCGYC	1 cut(s)	65
Hin1II	CATG	8 cut(s)	570, 611, 698, 910, 1241, 1321, 1850, 2174
Hin6I	GCGC	3 cut(s)	31, 1090, 2183
HinP1I	GCGC	3 cut(s)	31, 1090, 2183
HincII	GTYRAC	1 cut(s)	1104
HindII	GTYRAC	1 cut(s)	1104
HindIII	AAGCTT	1 cut(s)	681
HpaI	GTTAAC	1 cut(s)	1104
HpaII	CCGG	6 cut(s)	129, 225, 264, 601, 1198, 1925
HphI	GGTGA	5 cut(s)	232, 391, 1154, 1939, 2006
Hpy166II	GTNNAC	8 cut(s)	171, 470, 935, 956, 1104, 1567, 1865, 2194
Hpy8I	GTNNAC	8 cut(s)	171, 470, 935, 956, 1104, 1567, 1865, 2194
Hpy99I	CGWCG	1 cut(s)	67
HpyCH4III	ACNGT	7 cut(s)	490, 1301, 1549, 1582, 1712, 1915, 1987
HpyCH4IV	ACGT	5 cut(s)	142, 177, 390, 1591, 2099
HpyF10VI	GCNNNNNNNGC	7 cut(s)	15, 303, 755, 881, 1685, 1847, 1892
HpyF3I	CTNAG	5 cut(s)	594, 1011, 1112, 1338, 1455
HpySE526I	ACGT	5 cut(s)	142, 177, 390, 1591, 2099
Hsp92I	GRCGYC	1 cut(s)	65
Hsp92II	CATG	8 cut(s)	570, 611, 698, 910, 1241, 1321, 1850, 2174
HspAI	GCGC	3 cut(s)	31, 1090, 2183
Kpn2I	TCCGGA	1 cut(s)	1197
KroI	GCCGGC	1 cut(s)	128
KroNI	GCCGGC	1 cut(s)	130
Ksp22I	TGATCA	1 cut(s)	2032
KspAI	GTTAAC	1 cut(s)	1104
LmnI	GCTCC	7 cut(s)	107, 160, 195, 437, 557, 603, 1936
Lsp1109I	GCAGC	7 cut(s)	319, 598, 601, 1479, 1659, 1787, 1870
LweI	GCATC	4 cut(s)	613, 1191, 1286, 1531
MaeI	CTAG	2 cut(s)	702, 1860
MaeII	ACGT	5 cut(s)	142, 177, 390, 1591, 2099
MaeIII	GTNAC	4 cut(s)	386, 989, 1582, 1651
MbiI	CCGCTC	1 cut(s)	1461
MboII	GAAGA	7 cut(s)	653, 737, 839, 1031, 1186, 1436, 2096
MflI	RGATCY	3 cut(s)	270, 562, 1426
MhlI	GDGCHC	4 cut(s)	837, 1790, 1985, 2157
MlsI	TGGCCA	2 cut(s)	185, 1800
MluNI	TGGCCA	2 cut(s)	185, 1800
MlyI	GAGTC	3 cut(s)	215, 484, 2042
MmeI	TCCRAC	2 cut(s)	618, 1531
Mox20I	TGGCCA	2 cut(s)	185, 1800
Mph1103I	ATGCAT	1 cut(s)	1206
MroI	TCCGGA	1 cut(s)	1197
MroNI	GCCGGC	1 cut(s)	128
MroXI	GAANNNNTTC	4 cut(s)	729, 819, 1518, 1815
MscI	TGGCCA	2 cut(s)	185, 1800
MslI	CAYNNNNRTG	1 cut(s)	1209
Msp20I	TGGCCA	2 cut(s)	185, 1800
MspA1I	CMGCKG	2 cut(s)	332, 1672
MspI	CCGG	6 cut(s)	129, 225, 264, 601, 1198, 1925
MspR9I	CCNGG	2 cut(s)	187, 384
Mva1269I	GAATGC	3 cut(s)	1204, 1518, 2218
MvaI	CCWGG	2 cut(s)	187, 384
MvnI	CGCG	1 cut(s)	31
MwoI	GCNNNNNNNGC	7 cut(s)	15, 303, 755, 881, 1685, 1847, 1892
NaeI	GCCGGC	1 cut(s)	130
NcoI	CCATGG	1 cut(s)	566
NgoMIV	GCCGGC	1 cut(s)	128
NlaIII	CATG	8 cut(s)	570, 611, 698, 910, 1241, 1321, 1850, 2174
NlaIV	GGNNCC	8 cut(s)	103, 191, 439, 519, 1185, 1452, 1938, 2208
NmeAIII	GCCGAG	3 cut(s)	78, 188, 323
NmuCI	GTSAC	1 cut(s)	386
NsiI	ATGCAT	1 cut(s)	1206
NspI	RCATGY	1 cut(s)	1241
NspV	TTCGAA	1 cut(s)	1397
PagI	TCATGA	1 cut(s)	2170
PcsI	WCGNNNNNNNCGW	2 cut(s)	71, 282
PctI	GAATGC	3 cut(s)	1204, 1518, 2218
PdiI	GCCGGC	1 cut(s)	130
PdmI	GAANNNNTTC	4 cut(s)	729, 819, 1518, 1815
PfeI	GAWTC	7 cut(s)	204, 280, 580, 1116, 1379, 1408, 1856
PflFI	GACNNNGTC	2 cut(s)	67, 1635
PflMI	CCANNNNNTGG	1 cut(s)	1852
PkrI	GCNGC	7 cut(s)	334, 613, 616, 1494, 1674, 1777, 1885
PleI	GAGTC	3 cut(s)	215, 483, 2042
PmaCI	CACGTG	1 cut(s)	143
PmlI	CACGTG	1 cut(s)	143
PpsI	GAGTC	3 cut(s)	215, 483, 2042
Ppu21I	YACGTR	1 cut(s)	143
PshBI	ATTAAT	1 cut(s)	1793
PsiI	TTATAA	1 cut(s)	536
Psp6I	CCWGG	2 cut(s)	185, 382
PspCI	CACGTG	1 cut(s)	143
PspFI	CCCAGC	1 cut(s)	1747
PspGI	CCWGG	2 cut(s)	185, 382
PspN4I	GGNNCC	8 cut(s)	103, 191, 439, 519, 1185, 1452, 1938, 2208
PspPI	GGNCC	5 cut(s)	211, 1052, 1195, 1450, 2207
PstI	CTGCAG	1 cut(s)	1681
PsuI	RGATCY	3 cut(s)	270, 562, 1426
PsyI	GACNNNGTC	2 cut(s)	67, 1635
RsaI	GTAC	5 cut(s)	471, 936, 957, 1965, 2147
RsaNI	GTAC	5 cut(s)	470, 935, 956, 1964, 2146
RseI	CAYNNNNRTG	1 cut(s)	1209
SatI	GCNGC	7 cut(s)	333, 612, 615, 1493, 1673, 1776, 1884
Sau96I	GGNCC	5 cut(s)	211, 1052, 1195, 1450, 2207
SbfI	CCTGCAGG	1 cut(s)	1681
SchI	GAGTC	3 cut(s)	215, 484, 2042
ScrFI	CCNGG	2 cut(s)	187, 384
SdaI	CCTGCAGG	1 cut(s)	1681
SduI	GDGCHC	4 cut(s)	837, 1790, 1985, 2157
SfaNI	GCATC	4 cut(s)	613, 1191, 1286, 1531
SfcI	CTRYAG	2 cut(s)	1677, 1968
SfuI	TTCGAA	1 cut(s)	1397
SinI	GGWCC	4 cut(s)	1052, 1195, 1450, 2207
SmiMI	CAYNNNNRTG	1 cut(s)	1209
Sse8387I	CCTGCAGG	1 cut(s)	1681
SsiI	CCGC	9 cut(s)	7, 29, 115, 126, 193, 330, 705, 1461, 1670
SspMI	CTAG	2 cut(s)	702, 1860
StyD4I	CCNGG	2 cut(s)	185, 382
StyI	CCWWGG	2 cut(s)	147, 566
TaaI	ACNGT	7 cut(s)	490, 1301, 1549, 1582, 1712, 1915, 1987
TaiI	ACGT	5 cut(s)	145, 180, 393, 1594, 2102
TaqI	TCGA	5 cut(s)	219, 550, 1397, 1665, 2107
TaqII	GACCGA	1 cut(s)	2224
TatI	WGTACW	4 cut(s)	469, 934, 955, 2145
TfiI	GAWTC	7 cut(s)	204, 280, 580, 1116, 1379, 1408, 1856
TscAI	CASTG	3 cut(s)	1171, 1350, 1990
TseFI	GTSAC	1 cut(s)	386
TseI	GCWGC	7 cut(s)	332, 611, 614, 1492, 1672, 1775, 1883
Tsp45I	GTSAC	1 cut(s)	386
TspDTI	ATGAA	7 cut(s)	518, 683, 895, 1032, 1137, 1138, 1343
TspGWI	ACGGA	3 cut(s)	188, 1150, 1427
TspRI	CASTG	3 cut(s)	1171, 1350, 1990
Tth111I	GACNNNGTC	2 cut(s)	67, 1635
Van91I	CCANNNNNTGG	1 cut(s)	1852
VpaK11BI	GGWCC	4 cut(s)	1052, 1195, 1450, 2207
VspI	ATTAAT	1 cut(s)	1793
XapI	RAATTY	6 cut(s)	249, 890, 1700, 1738, 1973, 2132
XceI	RCATGY	1 cut(s)	1241
XmnI	GAANNNNTTC	4 cut(s)	729, 819, 1518, 1815
XspI	CTAG	2 cut(s)	702, 1860
Zsp2I	ATGCAT	1 cut(s)	1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.