Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0012306

Physical Location & Seq

Genomic Coordinates Forward (+)

40412615 .. 40420471

Gene Structure 7857 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG211300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGCCCCGCTTCCCCCGCTTCTCCACCCCGCGCCTCCTCTACTCCCTCCACACCTCCAAAACGACGCCGTCCCCGTCCCCGTCCCCGTCCCCGTCCTCCTCTCTCCTCGTCGGCTCCTTCCACCTCCGCCAATTCTCCGCCGGCAACCTCGCACGTGCCAAGGACGACAAGGAGCTATGGTGGACGGACGTGATGGCGAGGCTCCGCAACATCGGAATCTCGGCCCATATCGACTCCGGCAAGACCACTCTCACCGAGAGAATTCTCTACTACACCGGAAAGATCCACGAGATTCACGAGGTCAGAGGCCGAGACGGCGTCGGCGCCAAAATGGACTCCATGGATTTGGAGAGAGAGAAGGGAATTACCATTCAGTCCGCTGCCACTTACTGCACTTGGAATGGTTATCAGATTAACATAATTGACACCCCTGGTCACGTTGATTTCACCATTGAGGTTGAGAGAGCTTTGCGTGTTCTTGATGGAGCCATCCTTGTCCTTTGTAGCGTTGGTGGTGTACAGAGTCAGTCAATTACTGTTGATCGGCAAATGAAAAGATACGAGGTTCCAAGAATTGCATTTATAAACAAACTTGATCGAATGGGAGCAGATCCATGGAAAGTTCTGAATCAGATGAGGTCTAAGCTCCGGCATCATGCTGCTGCATTGCAACTTCCTATTGGGTTGGAAGATGATTTTAAGGGTCTTATTGATCTTGTGCAGTTAAAGGCTTTGTATTTTCATGGTTCTAGCGGTCAGGAAATTGTCATTGAAGACATTCCTTCTGATATGGAGGCGTTAGTCGCAGAAAAAAGGCGTGAGCTAATTGAAATTGTTTCCGAAGTTGATGACCAACTTGCCGAAGCATTTCTTGAAGATGTGCCCATTACACCTACTGATCTGGAGGAAGCTGTGCGAAGGGCTACCATTGCAAGGAAATTTATACCTGTGTTCATGGGTAGTGCATTTAAAAACAAGGGTGTACAACCACTTTTGAATGGTGTACTTGGTTATTTGCCTTGTCCATCTGAAGTCAGTAACTATGCTCTTGACCAGACTAAGGATGAAGATAAGGTTATATTAGGTGGAACTCCAGATGGACCTCTTGTAGCATTGGCCTTTAAATTGGAGGAAGGGCGTTTTGGTCAGTTAACCTTTCTAAGAATCTATGAAGGTGTTATACGGAAGGGTGATTTCATTTTTAACATTAACACTGGCAAGAAAATTAAGGTTCCTCGCTTGGTCCGGATGCATTCTGATGAGATGGAGGATATTCAAGAAGCACATGCTGGACAAATAGTCGCTGTATTTGGTGTGGATTGTGCATCAGGAGATACATTTACTGACGGTTCAGTTAAATATACCATGACTTCTATGAATGTCCCTGAGCCAGTGATGTCATTAGCTGTTCAGCCAGTTTCAAAAGATTCAGGAGGACAATTTTCGAAGGCTTTGAATCGTTTTCAGAAAGAAGATCCTACCTTCCGTGTTGGCTTGGACCCTGAGAGCGGACAGACAATCATATCGGGAATGGGAGAGCTGCATTTGGAAGTTTATGTTGAACGCATTCGGAGAGAATATAAGGTTGATGCAACTGTTGGAAAGCCTCGTGTAAACTTCAGAGAGACTGTTACTCAACGTGCTGACTTTGATTATTTACATAAAAAGCAATCTGGAGGACAGGGTCAATATGGGCGAGTAACTGGATTTATCGAACCGCTGCCTGCAGGATCAGCGACAAAGTTTGAATTTGAAAACAGTATTGTGGGACAAGCTATACCATCAAATTTTATCCCAGCTATTGAGAAGGGTTTTAAAGAAGCAGCCAATTCGGGCTCATTAATTGGCCATCCAGTTGAAAATGTTCGCATTGTTTTAACTGATGGTGCTTCCCATGCTGTGGATTCTAGTGAACTTGCCTTCAAATTAGCTGCAATATATGCCTTTAGAAAGTGCTATACGGTGGCAAAGCCGGTGATACTGGAGCCTGTTATGTTGGTGGAGTTGAAAGTACCTACAGAATTTCAGGGCACTGTTGCTGGTGATATTAACAAGAGAAAAGGTGTCATTATTGGAAATGATCAGGAAGGGGATGACTCTGTTATTACGGCCCAAGTAAGTATTTTCTTTTATGTAATTCTACTTAATACATTTACTTTGCTTATGCAACAAAAGGGGTTTTCACAGGTAATTAAGGACACTATTGTATTTGAAATCTTAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003746 GO:0003824 GO:0003924 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006412 GO:0006414 GO:0006518 GO:0006807 GO:0008135 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019538 GO:0030554 GO:0032543 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0042221 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0070125 GO:0071704 GO:0097159 GO:0097367 GO:0140053 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EFG_C EFG_II EFG_IV GTP_EFTU GTP_EFTU_D2

Protein Analysis

741

Amino Acids

82.08

Weight (kDa)

6.01

Isoelectric Point (pI)

38.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	67 - 340	8.6e-61	Elongation factor Tu GTP binding domain
EF-G_D2	PF22042	381 - 449	8.2e-11	Elongation factor G domain 2
GTP_EFTU_D2	PF03144	382 - 448	4.4e-14	Elongation factor Tu domain 2
EFG_III	PF14492	461 - 535	2.5e-29	Elongation Factor G, domain III
EFG_IV	PF03764	536 - 656	6.1e-38	Elongation factor G, domain IV
EFG_C	PF00679	660 - 706	7.6e-09	Elongation factor G C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45332 AT1G45332 AT2G45030
fragaria_vesca	FvH4_7g10500 FvH4_7g10500 FvH4_7g10500
malus_domestica	MD07G1111000.v1.1
prunus_persica	Prupe.2G134500_v2.0.a1
pyrus_communis	pycom07g09580
rosa_chinensis	RchiOBHm_Chr1g0348291
rosa_laevigata	RLG00000028669
rosa_multiflora	Rmu_sc0027364.1_g000002
rosa_roxburghii	Rroxscaffold_4G00307040
rosa_rugosa	Rorug01G0194100
rosa_samantha	Rh1AG211300 Rh1BG177800 Rh1CG195700 Rh1DG207300
rosa_wichuraiana	Rw1G017850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	584
AccB1I	GGYRCC	1 cut(s)	323
AccB7I	CCANNNNNTGG	1 cut(s)	1900
AccBSI	CCGCTC	1 cut(s)	1509
AccII	CGCG	1 cut(s)	31
AccIII	TCCGGA	1 cut(s)	1245
AclWI	GGATC	4 cut(s)	277, 605, 1469, 1738
AcoI	YGGCCR	1 cut(s)	1846
AcsI	RAATTY	5 cut(s)	261, 938, 1748, 1786, 2021
AcuI	CTGAAG	2 cut(s)	1050, 1603
AcvI	CACGTG	1 cut(s)	155
AcyI	GRCGYC	3 cut(s)	65, 318, 324
AfaI	GTAC	4 cut(s)	519, 984, 1005, 2013
AfiI	CCNNNNNNNGG	4 cut(s)	933, 1060, 1508, 1900
AhdI	GACNNNNNGTC	1 cut(s)	1298
AjiI	CACGTC	1 cut(s)	190
AjnI	CCWGG	1 cut(s)	430
AjuI	GAANNNNNNNTTGG	2 cut(s)	1125, 1157
Alw26I	GTCTC	2 cut(s)	306, 1619
AlwI	GGATC	4 cut(s)	277, 605, 1469, 1738
Aor13HI	TCCGGA	1 cut(s)	1245
AoxI	GGCC	5 cut(s)	222, 307, 1116, 1846, 2109
ApeKI	GCWGC	7 cut(s)	380, 659, 662, 1540, 1720, 1823, 1931
ApoI	RAATTY	5 cut(s)	261, 938, 1748, 1786, 2021
AseI	ATTAAT	1 cut(s)	1841
Asp700I	GAANNNNTTC	4 cut(s)	777, 867, 1566, 1863
AspLEI	GCGC	2 cut(s)	33, 326
AspS9I	GGNCC	5 cut(s)	223, 1100, 1243, 1498, 2110
AsuHPI	GGTGA	5 cut(s)	244, 439, 1202, 1987, 2054
AsuII	TTCGAA	1 cut(s)	1445
AvaII	GGWCC	3 cut(s)	1100, 1243, 1498
BaeGI	GKGCMC	2 cut(s)	885, 2033
BalI	TGGCCA	1 cut(s)	1848
BanI	GGYRCC	1 cut(s)	323
BanII	GRGCYC	1 cut(s)	1838
BarI	GAAGNNNNNNTAC	2 cut(s)	1164, 1196
BauI	CACGAG	3 cut(s)	287, 296, 1608
BbrPI	CACGTG	1 cut(s)	155
BbsI	GAAGAC	1 cut(s)	780
BbvI	GCAGC	7 cut(s)	367, 646, 649, 1527, 1707, 1835, 1918
BccI	CCATC	9 cut(s)	187, 476, 497, 1033, 1091, 1258, 1789, 1857, 1877
BceAI	ACGGC	3 cut(s)	52, 331, 2124
BcgI	CGANNNNNNTGC	2 cut(s)	1812, 1846
BciT130I	CCWGG	1 cut(s)	432
BclI	TGATCA	1 cut(s)	2080
BcoDI	GTCTC	2 cut(s)	306, 1619
BfaI	CTAG	2 cut(s)	750, 1908
BfmI	CTRYAG	2 cut(s)	1725, 2016
BfoI	RGCGCY	1 cut(s)	327
BglI	GCCNNNNNGGC	1 cut(s)	315
BisI	GCNGC	7 cut(s)	381, 660, 663, 1541, 1721, 1824, 1932
BlsI	GCNGC	7 cut(s)	382, 661, 664, 1542, 1722, 1825, 1933
Bme1390I	CCNGG	1 cut(s)	432
Bme18I	GGWCC	3 cut(s)	1100, 1243, 1498
BmeRI	GACNNNNNGTC	1 cut(s)	1298
BmgBI	CACGTC	1 cut(s)	190
BmgT120I	GGNCC	5 cut(s)	223, 1100, 1243, 1498, 2110
BmiI	GGNNCC	8 cut(s)	115, 203, 325, 487, 567, 1233, 1500, 1986
BmrFI	CCNGG	1 cut(s)	432
BmsI	GCATC	4 cut(s)	661, 1239, 1334, 1579
BpiI	GAAGAC	1 cut(s)	780
BpmI	CTGGAG	4 cut(s)	923, 1077, 1695, 2003
Bpu10I	CCTNAGC	1 cut(s)	1386
Bpu14I	TTCGAA	1 cut(s)	1445
BsaAI	YACGTR	1 cut(s)	155
BsaHI	GRCGYC	3 cut(s)	65, 318, 324
BsaJI	CCNNGG	4 cut(s)	159, 339, 430, 614
BsaWI	WCCGGW	2 cut(s)	275, 1245
BsaXI	ACNNNNNCTCC	2 cut(s)	164, 194
Bsc4I	CCNNNNNNNGG	4 cut(s)	933, 1060, 1508, 1900
Bse118I	RCCGGY	2 cut(s)	140, 1972
Bse1I	ACTGG	6 cut(s)	1219, 1391, 1415, 1708, 1853, 1986
Bse3DI	GCAATG	2 cut(s)	665, 927
BseAI	TCCGGA	1 cut(s)	1245
BseBI	CCWGG	1 cut(s)	432
BseDI	CCNNGG	4 cut(s)	159, 339, 430, 614
BseGI	GGATG	5 cut(s)	489, 1069, 1254, 1849, 2098
BseLI	CCNNNNNNNGG	4 cut(s)	933, 1060, 1508, 1900
BseMI	GCAATG	2 cut(s)	665, 927
BseMII	CTCAG	2 cut(s)	1377, 1494
BseNI	ACTGG	6 cut(s)	1219, 1391, 1415, 1708, 1853, 1986
BseRI	GAGGAG	3 cut(s)	26, 88, 95
BseSI	GKGCMC	2 cut(s)	885, 2033
BseXI	GCAGC	7 cut(s)	367, 646, 649, 1527, 1707, 1835, 1918
BseYI	CCCAGC	1 cut(s)	1795
BsgI	GTGCAG	2 cut(s)	376, 740
Bsh1236I	CGCG	1 cut(s)	31
BshFI	GGCC	5 cut(s)	224, 309, 1118, 1848, 2111
BshNI	GGYRCC	1 cut(s)	323
BsiSI	CCGG	6 cut(s)	141, 237, 276, 649, 1246, 1973
BslFI	GGGAC	6 cut(s)	55, 61, 67, 73, 1367, 1782
BslI	CCNNNNNNNGG	4 cut(s)	933, 1060, 1508, 1900
BsmAI	GTCTC	2 cut(s)	306, 1619
BsmBI	CGTCTC	1 cut(s)	306
BsmFI	GGGAC	6 cut(s)	55, 61, 67, 73, 1367, 1782
BsmI	GAATGC	2 cut(s)	1252, 1566
BsnI	GGCC	5 cut(s)	224, 309, 1118, 1848, 2111
Bsp119I	TTCGAA	1 cut(s)	1445
Bsp1286I	GDGCHC	3 cut(s)	885, 1838, 2033
Bsp13I	TCCGGA	1 cut(s)	1245
Bsp1407I	TGTACA	2 cut(s)	517, 982
Bsp143I	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
Bsp19I	CCATGG	2 cut(s)	339, 614
BspANI	GGCC	5 cut(s)	224, 309, 1118, 1848, 2111
BspCNI	CTCAG	2 cut(s)	1378, 1495
BspEI	TCCGGA	1 cut(s)	1245
BspFNI	CGCG	1 cut(s)	31
BspLI	GGNNCC	8 cut(s)	115, 203, 325, 487, 567, 1233, 1500, 1986
BspMAI	CTGCAG	1 cut(s)	1729
BspPI	GGATC	4 cut(s)	277, 605, 1469, 1738
BspT104I	TTCGAA	1 cut(s)	1445
BspT107I	GGYRCC	1 cut(s)	323
BsrBI	CCGCTC	1 cut(s)	1509
BsrDI	GCAATG	2 cut(s)	665, 927
BsrFI	RCCGGY	2 cut(s)	140, 1972
BsrGI	TGTACA	2 cut(s)	517, 982
BsrI	ACTGG	6 cut(s)	1219, 1391, 1415, 1708, 1853, 1986
BssAI	RCCGGY	2 cut(s)	140, 1972
BssECI	CCNNGG	4 cut(s)	159, 339, 430, 614
BssMI	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
BssNI	GRCGYC	3 cut(s)	65, 318, 324
BssSI	CACGAG	3 cut(s)	287, 296, 1608
BssT1I	CCWWGG	3 cut(s)	159, 339, 614
Bst2BI	CACGAG	3 cut(s)	287, 296, 1608
Bst2UI	CCWGG	1 cut(s)	432
Bst4CI	ACNGT	7 cut(s)	538, 1349, 1597, 1630, 1760, 1963, 2035
BstACI	GRCGYC	3 cut(s)	65, 318, 324
BstAPI	GCANNNNNTGC	1 cut(s)	1940
BstAUI	TGTACA	2 cut(s)	517, 982
BstBAI	YACGTR	1 cut(s)	155
BstBI	TTCGAA	1 cut(s)	1445
BstC8I	GCNNGC	2 cut(s)	142, 1725
BstDEI	CTNAG	5 cut(s)	642, 1059, 1160, 1386, 1503
BstDSI	CCRYGG	2 cut(s)	339, 614
BstF5I	GGATG	5 cut(s)	489, 1069, 1254, 1849, 2098
BstFNI	CGCG	1 cut(s)	31
BstH2I	RGCGCY	1 cut(s)	327
BstHHI	GCGC	2 cut(s)	33, 326
BstKTI	GATC	9 cut(s)	285, 544, 598, 613, 715, 901, 1477, 1733, 2083
BstMAI	GTCTC	2 cut(s)	306, 1619
BstMBI	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
BstMWI	GCNNNNNNNGC	7 cut(s)	15, 315, 803, 929, 1733, 1895, 1940
BstNI	CCWGG	1 cut(s)	432
BstNSI	RCATGY	1 cut(s)	1289
BstSCI	CCNGG	1 cut(s)	430
BstSFI	CTRYAG	2 cut(s)	1725, 2016
BstSLI	GKGCMC	2 cut(s)	885, 2033
BstUI	CGCG	1 cut(s)	31
BstV1I	GCAGC	7 cut(s)	367, 646, 649, 1527, 1707, 1835, 1918
BstV2I	GAAGAC	1 cut(s)	780
BstX2I	RGATCY	3 cut(s)	282, 610, 1474
BstXI	CCANNNNNNTGG	1 cut(s)	346
BstYI	RGATCY	3 cut(s)	282, 610, 1474
BsuRI	GGCC	5 cut(s)	224, 309, 1118, 1848, 2111
BtgI	CCRYGG	2 cut(s)	339, 614
BtrI	CACGTC	1 cut(s)	190
BtsCI	GGATG	5 cut(s)	489, 1069, 1254, 1849, 2098
BtsIMutI	CAGTG	3 cut(s)	1212, 1398, 2031
Cac8I	GCNNGC	2 cut(s)	142, 1725
CfoI	GCGC	2 cut(s)	33, 326
Cfr10I	RCCGGY	2 cut(s)	140, 1972
Cfr13I	GGNCC	5 cut(s)	223, 1100, 1243, 1498, 2110
CseI	GACGC	2 cut(s)	73, 307
Csp6I	GTAC	4 cut(s)	518, 983, 1004, 2012
CviAII	CATG	8 cut(s)	340, 615, 656, 743, 955, 1286, 1366, 1895
CviQI	GTAC	4 cut(s)	518, 983, 1004, 2012
DdeI	CTNAG	5 cut(s)	642, 1059, 1160, 1386, 1503
DinI	GGCGCC	1 cut(s)	325
DpnI	GATC	9 cut(s)	284, 543, 597, 612, 714, 900, 1476, 1732, 2082
DpnII	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
DraI	TTTAAA	3 cut(s)	970, 1123, 1816
DriI	GACNNNNNGTC	1 cut(s)	1298
EaeI	YGGCCR	1 cut(s)	1846
Eam1105I	GACNNNNNGTC	1 cut(s)	1298
EciI	GGCGGA	2 cut(s)	116, 127
Eco130I	CCWWGG	3 cut(s)	159, 339, 614
Eco24I	GRGCYC	1 cut(s)	1838
Eco47I	GGWCC	3 cut(s)	1100, 1243, 1498
Eco57I	CTGAAG	2 cut(s)	1050, 1603
Eco72I	CACGTG	1 cut(s)	155
EcoRI	GAATTC	1 cut(s)	261
EcoRII	CCWGG	1 cut(s)	430
EcoT14I	CCWWGG	3 cut(s)	159, 339, 614
EcoT22I	ATGCAT	1 cut(s)	1254
EcoT38I	GRGCYC	1 cut(s)	1838
EgeI	GGCGCC	1 cut(s)	325
EheI	GGCGCC	1 cut(s)	325
ErhI	CCWWGG	3 cut(s)	159, 339, 614
Esp3I	CGTCTC	1 cut(s)	306
FaeI	CATG	8 cut(s)	343, 618, 659, 746, 958, 1289, 1369, 1898
FalI	AAGNNNNNCTT	2 cut(s)	855, 887
FaqI	GGGAC	6 cut(s)	55, 61, 67, 73, 1367, 1782
FatI	CATG	8 cut(s)	339, 614, 655, 742, 954, 1285, 1365, 1894
FauI	CCCGC	3 cut(s)	14, 23, 36
FbaI	TGATCA	1 cut(s)	2080
Fnu4HI	GCNGC	7 cut(s)	381, 660, 663, 1541, 1721, 1824, 1932
FokI	GGATG	5 cut(s)	476, 1076, 1261, 1836, 2105
FriOI	GRGCYC	1 cut(s)	1838
Fsp4HI	GCNGC	7 cut(s)	381, 660, 663, 1541, 1721, 1824, 1932
FspBI	CTAG	2 cut(s)	750, 1908
GlaI	GCGC	2 cut(s)	32, 325
GluI	GCNGC	7 cut(s)	381, 660, 663, 1541, 1721, 1824, 1932
GsaI	CCCAGC	1 cut(s)	1799
GsuI	CTGGAG	4 cut(s)	923, 1077, 1695, 2003
HaeII	RGCGCY	1 cut(s)	327
HaeIII	GGCC	5 cut(s)	224, 309, 1118, 1848, 2111
HapII	CCGG	6 cut(s)	141, 237, 276, 649, 1246, 1973
HgaI	GACGC	2 cut(s)	73, 307
HhaI	GCGC	2 cut(s)	33, 326
Hin1I	GRCGYC	3 cut(s)	65, 318, 324
Hin1II	CATG	8 cut(s)	343, 618, 659, 746, 958, 1289, 1369, 1898
Hin6I	GCGC	2 cut(s)	31, 324
HinP1I	GCGC	2 cut(s)	31, 324
HincII	GTYRAC	1 cut(s)	1152
HindII	GTYRAC	1 cut(s)	1152
HpaI	GTTAAC	1 cut(s)	1152
HpaII	CCGG	6 cut(s)	141, 237, 276, 649, 1246, 1973
HphI	GGTGA	5 cut(s)	244, 439, 1202, 1987, 2054
Hpy166II	GTNNAC	7 cut(s)	183, 518, 983, 1004, 1152, 1615, 1913
Hpy8I	GTNNAC	7 cut(s)	183, 518, 983, 1004, 1152, 1615, 1913
Hpy99I	CGWCG	3 cut(s)	67, 113, 323
HpyCH4III	ACNGT	7 cut(s)	538, 1349, 1597, 1630, 1760, 1963, 2035
HpyCH4IV	ACGT	4 cut(s)	154, 189, 438, 1639
HpyF10VI	GCNNNNNNNGC	7 cut(s)	15, 315, 803, 929, 1733, 1895, 1940
HpyF3I	CTNAG	5 cut(s)	642, 1059, 1160, 1386, 1503
HpySE526I	ACGT	4 cut(s)	154, 189, 438, 1639
Hsp92I	GRCGYC	3 cut(s)	65, 318, 324
Hsp92II	CATG	8 cut(s)	343, 618, 659, 746, 958, 1289, 1369, 1898
HspAI	GCGC	2 cut(s)	31, 324
KasI	GGCGCC	1 cut(s)	323
Kpn2I	TCCGGA	1 cut(s)	1245
KroI	GCCGGC	1 cut(s)	140
KroNI	GCCGGC	1 cut(s)	142
Ksp22I	TGATCA	1 cut(s)	2080
KspAI	GTTAAC	1 cut(s)	1152
Kzo9I	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
LmnI	GCTCC	7 cut(s)	119, 172, 207, 485, 605, 651, 1984
Lsp1109I	GCAGC	7 cut(s)	367, 646, 649, 1527, 1707, 1835, 1918
LweI	GCATC	4 cut(s)	661, 1239, 1334, 1579
MaeI	CTAG	2 cut(s)	750, 1908
MaeII	ACGT	4 cut(s)	154, 189, 438, 1639
MaeIII	GTNAC	4 cut(s)	434, 1037, 1630, 1699
MalI	GATC	9 cut(s)	284, 543, 597, 612, 714, 900, 1476, 1732, 2082
MbiI	CCGCTC	1 cut(s)	1509
MboI	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
MboII	GAAGA	5 cut(s)	701, 785, 887, 1079, 1484
MflI	RGATCY	3 cut(s)	282, 610, 1474
MhlI	GDGCHC	3 cut(s)	885, 1838, 2033
MlsI	TGGCCA	1 cut(s)	1848
MluNI	TGGCCA	1 cut(s)	1848
Mly113I	GGCGCC	1 cut(s)	324
MlyI	GAGTC	4 cut(s)	227, 329, 532, 2090
MmeI	TCCRAC	2 cut(s)	666, 1579
Mox20I	TGGCCA	1 cut(s)	1848
Mph1103I	ATGCAT	1 cut(s)	1254
MroI	TCCGGA	1 cut(s)	1245
MroNI	GCCGGC	1 cut(s)	140
MroXI	GAANNNNTTC	4 cut(s)	777, 867, 1566, 1863
MscI	TGGCCA	1 cut(s)	1848
MslI	CAYNNNNRTG	1 cut(s)	1257
Msp20I	TGGCCA	1 cut(s)	1848
MspA1I	CMGCKG	2 cut(s)	380, 1720
MspI	CCGG	6 cut(s)	141, 237, 276, 649, 1246, 1973
MspR9I	CCNGG	1 cut(s)	432
Mva1269I	GAATGC	2 cut(s)	1252, 1566
MvaI	CCWGG	1 cut(s)	432
MvnI	CGCG	1 cut(s)	31
MwoI	GCNNNNNNNGC	7 cut(s)	15, 315, 803, 929, 1733, 1895, 1940
NaeI	GCCGGC	1 cut(s)	142
NarI	GGCGCC	1 cut(s)	324
NcoI	CCATGG	2 cut(s)	339, 614
NdeII	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
NgoMIV	GCCGGC	1 cut(s)	140
NlaIII	CATG	8 cut(s)	343, 618, 659, 746, 958, 1289, 1369, 1898
NlaIV	GGNNCC	8 cut(s)	115, 203, 325, 487, 567, 1233, 1500, 1986
NmeAIII	GCCGAG	2 cut(s)	200, 335
NmuCI	GTSAC	1 cut(s)	434
NsiI	ATGCAT	1 cut(s)	1254
NspI	RCATGY	1 cut(s)	1289
NspV	TTCGAA	1 cut(s)	1445
PcsI	WCGNNNNNNNCGW	2 cut(s)	71, 294
PctI	GAATGC	2 cut(s)	1252, 1566
PdiI	GCCGGC	1 cut(s)	142
PdmI	GAANNNNTTC	4 cut(s)	777, 867, 1566, 1863
PfeI	GAWTC	7 cut(s)	216, 292, 628, 1164, 1427, 1456, 1904
PflFI	GACNNNGTC	3 cut(s)	67, 317, 1683
PflMI	CCANNNNNTGG	1 cut(s)	1900
PkrI	GCNGC	7 cut(s)	382, 661, 664, 1542, 1722, 1825, 1933
PleI	GAGTC	4 cut(s)	227, 329, 531, 2090
PluTI	GGCGCC	1 cut(s)	327
PmaCI	CACGTG	1 cut(s)	155
PmlI	CACGTG	1 cut(s)	155
PpsI	GAGTC	4 cut(s)	227, 329, 531, 2090
Ppu21I	YACGTR	1 cut(s)	155
PshBI	ATTAAT	1 cut(s)	1841
PsiI	TTATAA	1 cut(s)	584
Psp6I	CCWGG	1 cut(s)	430
PspCI	CACGTG	1 cut(s)	155
PspFI	CCCAGC	1 cut(s)	1795
PspGI	CCWGG	1 cut(s)	430
PspN4I	GGNNCC	8 cut(s)	115, 203, 325, 487, 567, 1233, 1500, 1986
PspPI	GGNCC	5 cut(s)	223, 1100, 1243, 1498, 2110
PstI	CTGCAG	1 cut(s)	1729
PsuI	RGATCY	3 cut(s)	282, 610, 1474
PsyI	GACNNNGTC	3 cut(s)	67, 317, 1683
RsaI	GTAC	4 cut(s)	519, 984, 1005, 2013
RsaNI	GTAC	4 cut(s)	518, 983, 1004, 2012
RseI	CAYNNNNRTG	1 cut(s)	1257
SatI	GCNGC	7 cut(s)	381, 660, 663, 1541, 1721, 1824, 1932
Sau3AI	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
Sau96I	GGNCC	5 cut(s)	223, 1100, 1243, 1498, 2110
SbfI	CCTGCAGG	1 cut(s)	1729
SchI	GAGTC	4 cut(s)	227, 329, 532, 2090
ScrFI	CCNGG	1 cut(s)	432
SdaI	CCTGCAGG	1 cut(s)	1729
SduI	GDGCHC	3 cut(s)	885, 1838, 2033
SfaNI	GCATC	4 cut(s)	661, 1239, 1334, 1579
SfcI	CTRYAG	2 cut(s)	1725, 2016
SfoI	GGCGCC	1 cut(s)	325
SfuI	TTCGAA	1 cut(s)	1445
SinI	GGWCC	3 cut(s)	1100, 1243, 1498
SmiMI	CAYNNNNRTG	1 cut(s)	1257
Sse8387I	CCTGCAGG	1 cut(s)	1729
SspDI	GGCGCC	1 cut(s)	323
SspMI	CTAG	2 cut(s)	750, 1908
StyD4I	CCNGG	1 cut(s)	430
StyI	CCWWGG	3 cut(s)	159, 339, 614
TaaI	ACNGT	7 cut(s)	538, 1349, 1597, 1630, 1760, 1963, 2035
TaiI	ACGT	4 cut(s)	157, 192, 441, 1642
TaqI	TCGA	4 cut(s)	231, 598, 1445, 1713
TatI	WGTACW	3 cut(s)	517, 982, 1003
TfiI	GAWTC	7 cut(s)	216, 292, 628, 1164, 1427, 1456, 1904
TscAI	CASTG	3 cut(s)	1219, 1398, 2038
TseFI	GTSAC	1 cut(s)	434
TseI	GCWGC	7 cut(s)	380, 659, 662, 1540, 1720, 1823, 1931
Tsp45I	GTSAC	1 cut(s)	434
TspDTI	ATGAA	7 cut(s)	566, 731, 943, 1080, 1185, 1186, 1391
TspGWI	ACGGA	3 cut(s)	200, 1198, 1475
TspRI	CASTG	3 cut(s)	1219, 1398, 2038
Tth111I	GACNNNGTC	3 cut(s)	67, 317, 1683
Van91I	CCANNNNNTGG	1 cut(s)	1900
VpaK11BI	GGWCC	3 cut(s)	1100, 1243, 1498
VspI	ATTAAT	1 cut(s)	1841
XapI	RAATTY	5 cut(s)	261, 938, 1748, 1786, 2021
XceI	RCATGY	1 cut(s)	1289
XmnI	GAANNNNTTC	4 cut(s)	777, 867, 1566, 1863
XspI	CTAG	2 cut(s)	750, 1908
Zsp2I	ATGCAT	1 cut(s)	1254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.