Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0012306

Physical Location & Seq

Genomic Coordinates Forward (+)

42823125 .. 42830981

Gene Structure 7857 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG195700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGCCCCGCTTCCCCCGCTTCTCCACCCCGCGCCTCCTCTACTCCCTCCACACCTCCAAAACGACGCCGTCCCCGTCCCCGTCCCCGTCCCCGTCCTCCTCTCTCCTCGTCGGCTCCTTCCACCTCCGCCAATTCTCCGCCGGCAACCTCGCACGTGCCAAGGACGACAAGGAGCTATGGTGGACGGACGTGATGGCGAGGCTCCGCAACATCGGAATCTCGGCCCATATCGACTCCGGCAAGACCACTCTCACCGAGAGAATTCTCTACTACACCGGAAAGATCCACGAGATTCACGAGGTCAGAGGCCGAGACGGCGTCGGCGCCAAAATGGACTCCATGGATTTGGAGAGAGAGAAGGGAATTACCATTCAGTCCGCTGCCACTTACTGCACTTGGAATGGTTATCAGATTAACATAATTGACACCCCTGGTCACGTTGATTTCACCATTGAGGTTGAGAGAGCTTTGCGTGTTCTTGATGGAGCCATCCTTGTCCTTTGTAGCGTTGGTGGTGTACAGAGTCAGTCAATTACTGTTGATCGGCAAATGAAAAGATACGAGGTTCCAAGAATTGCATTTATAAACAAACTTGATCGAATGGGAGCAGATCCATGGAAAGTTCTGAATCAGATGAGGTCTAAGCTCCGGCATCATGCTGCTGCATTGCAACTTCCTATTGGGTTGGAAGATGATTTTAAGGGTCTTATTGATCTTGTGCAGTTAAAGGCTTTGTATTTTCATGGTTCTAGCGGTCAGGAAATTGTCATTGAAGACATTCCTTCTGATATGGAGGCGTTAGTCGCAGAAAAAAGGCGTGAGCTAATTGAAATTGTTTCCGAAGTTGATGACCAACTTGCCGAAGCATTTCTTGAAGATGTGCCCATTACACCTACTGATCTGGAGGAAGCTGTGCGAAGGGCTACCATTGCAAGGAAATTTATACCTGTGTTCATGGGTAGTGCATTTAAAAACAAGGGTGTACAACCACTTTTGAATGGTGTACTTGGTTATTTGCCTTGTCCATCTGAAGTCAGTAACTATGCTCTTGACCAGACTAAGGATGAAGATAAGGTTATATTAGGTGGAACTCCAGATGGACCTCTTGTAGCATTGGCCTTTAAATTGGAGGAAGGGCGTTTTGGTCAGTTAACCTTTCTAAGAATCTATGAAGGTGTTATACGGAAGGGTGATTTCATTTTTAACATTAACACTGGCAAGAAAATTAAGGTTCCTCGCTTGGTCCGGATGCATTCTGATGAGATGGAGGATATTCAAGAAGCACATGCTGGACAAATAGTCGCTGTATTTGGTGTGGATTGTGCATCAGGAGATACATTTACTGACGGTTCAGTTAAATATACCATGACTTCTATGAATGTCCCTGAGCCAGTGATGTCATTAGCTGTTCAGCCAGTTTCAAAAGATTCAGGAGGACAATTTTCGAAGGCTTTGAATCGTTTTCAGAAAGAAGATCCTACCTTCCGTGTTGGCTTGGACCCTGAGAGCGGACAGACAATCATATCGGGAATGGGAGAGCTGCATTTGGAAGTTTATGTTGAACGCATTCGGAGAGAATATAAGGTTGATGCAACTGTTGGAAAGCCTCGTGTAAACTTCAGAGAGACTGTTACTCAACGTGCTGACTTTGATTATTTACATAAAAAGCAATCTGGAGGACAGGGTCAATATGGGCGAGTAACTGGATTTATCGAACCGCTGCCTGCAGGATCAGCGACAAAGTTTGAATTTGAAAACAGTATTGTGGGACAAGCTATACCATCAAATTTTATCCCAGCTATTGAGAAGGGTTTTAAAGAAGCAGCCAATTCGGGCTCATTAATTGGCCATCCAGTTGAAAATGTTCGCATTGTTTTAACTGATGGTGCTTCCCATGCTGTGGATTCTAGTGAACTTGCCTTCAAATTAGCTGCAATATATGCCTTTAGAAAGTGCTATACGGTGGCAAAGCCGGTGATACTGGAGCCTGTTATGTTGGTGGAGTTGAAAGTACCTACAGAATTTCAGGGCACTGTTGCTGGTGATATTAACAAGAGAAAAGGTGTCATTATTGGAAATGATCAGGAAGGGGATGACTCTGTTATTACGGCCCAAGTAAGTATTTTCTTTTATGTAATTCTACTTAATACATTTACTTTGCTTATGCAACAAAAGGGGTTTTCACAGGTAATTAAGGACACTATTGTATTTGAAATCTTAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003676 GO:0003723 GO:0003746 GO:0003824 GO:0003924 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006412 GO:0006414 GO:0006518 GO:0006807 GO:0008135 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019538 GO:0030554 GO:0032543 GO:0032553 GO:0032555 GO:0032559 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0042221 GO:0043043 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050896 GO:0070125 GO:0071704 GO:0097159 GO:0097367 GO:0140053 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EFG_C EFG_II EFG_IV GTP_EFTU GTP_EFTU_D2

Protein Analysis

741

Amino Acids

82.08

Weight (kDa)

6.01

Isoelectric Point (pI)

38.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GTP_EFTU	PF00009	67 - 340	8.6e-61	Elongation factor Tu GTP binding domain
EF-G_D2	PF22042	381 - 449	8.2e-11	Elongation factor G domain 2
GTP_EFTU_D2	PF03144	382 - 448	4.4e-14	Elongation factor Tu domain 2
EFG_III	PF14492	461 - 535	2.5e-29	Elongation Factor G, domain III
EFG_IV	PF03764	536 - 656	6.1e-38	Elongation factor G, domain IV
EFG_C	PF00679	660 - 706	7.6e-09	Elongation factor G C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0012306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G45332 AT1G45332 AT2G45030
fragaria_vesca	FvH4_7g10500 FvH4_7g10500 FvH4_7g10500
malus_domestica	MD07G1111000.v1.1
prunus_persica	Prupe.2G134500_v2.0.a1
pyrus_communis	pycom07g09580
rosa_chinensis	RchiOBHm_Chr1g0348291
rosa_laevigata	RLG00000028669
rosa_multiflora	Rmu_sc0027364.1_g000002
rosa_roxburghii	Rroxscaffold_4G00307040
rosa_rugosa	Rorug01G0194100
rosa_samantha	Rh1AG211300 Rh1BG177800 Rh1CG195700 Rh1DG207300
rosa_wichuraiana	Rw1G017850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	584
AccB1I	GGYRCC	1 cut(s)	323
AccB7I	CCANNNNNTGG	1 cut(s)	1900
AccBSI	CCGCTC	1 cut(s)	1509
AccII	CGCG	1 cut(s)	31
AccIII	TCCGGA	1 cut(s)	1245
AclWI	GGATC	4 cut(s)	277, 605, 1469, 1738
AcoI	YGGCCR	1 cut(s)	1846
AcsI	RAATTY	5 cut(s)	261, 938, 1748, 1786, 2021
AcuI	CTGAAG	2 cut(s)	1050, 1603
AcvI	CACGTG	1 cut(s)	155
AcyI	GRCGYC	3 cut(s)	65, 318, 324
AfaI	GTAC	4 cut(s)	519, 984, 1005, 2013
AfiI	CCNNNNNNNGG	4 cut(s)	933, 1060, 1508, 1900
AhdI	GACNNNNNGTC	1 cut(s)	1298
AjiI	CACGTC	1 cut(s)	190
AjnI	CCWGG	1 cut(s)	430
AjuI	GAANNNNNNNTTGG	2 cut(s)	1125, 1157
Alw26I	GTCTC	2 cut(s)	306, 1619
AlwI	GGATC	4 cut(s)	277, 605, 1469, 1738
Aor13HI	TCCGGA	1 cut(s)	1245
AoxI	GGCC	5 cut(s)	222, 307, 1116, 1846, 2109
ApeKI	GCWGC	7 cut(s)	380, 659, 662, 1540, 1720, 1823, 1931
ApoI	RAATTY	5 cut(s)	261, 938, 1748, 1786, 2021
AseI	ATTAAT	1 cut(s)	1841
Asp700I	GAANNNNTTC	4 cut(s)	777, 867, 1566, 1863
AspLEI	GCGC	2 cut(s)	33, 326
AspS9I	GGNCC	5 cut(s)	223, 1100, 1243, 1498, 2110
AsuHPI	GGTGA	5 cut(s)	244, 439, 1202, 1987, 2054
AsuII	TTCGAA	1 cut(s)	1445
AvaII	GGWCC	3 cut(s)	1100, 1243, 1498
BaeGI	GKGCMC	2 cut(s)	885, 2033
BalI	TGGCCA	1 cut(s)	1848
BanI	GGYRCC	1 cut(s)	323
BanII	GRGCYC	1 cut(s)	1838
BarI	GAAGNNNNNNTAC	2 cut(s)	1164, 1196
BauI	CACGAG	3 cut(s)	287, 296, 1608
BbrPI	CACGTG	1 cut(s)	155
BbsI	GAAGAC	1 cut(s)	780
BbvI	GCAGC	7 cut(s)	367, 646, 649, 1527, 1707, 1835, 1918
BccI	CCATC	9 cut(s)	187, 476, 497, 1033, 1091, 1258, 1789, 1857, 1877
BceAI	ACGGC	3 cut(s)	52, 331, 2124
BcgI	CGANNNNNNTGC	2 cut(s)	1812, 1846
BciT130I	CCWGG	1 cut(s)	432
BclI	TGATCA	1 cut(s)	2080
BcoDI	GTCTC	2 cut(s)	306, 1619
BfaI	CTAG	2 cut(s)	750, 1908
BfmI	CTRYAG	2 cut(s)	1725, 2016
BfoI	RGCGCY	1 cut(s)	327
BglI	GCCNNNNNGGC	1 cut(s)	315
BisI	GCNGC	7 cut(s)	381, 660, 663, 1541, 1721, 1824, 1932
BlsI	GCNGC	7 cut(s)	382, 661, 664, 1542, 1722, 1825, 1933
Bme1390I	CCNGG	1 cut(s)	432
Bme18I	GGWCC	3 cut(s)	1100, 1243, 1498
BmeRI	GACNNNNNGTC	1 cut(s)	1298
BmgBI	CACGTC	1 cut(s)	190
BmgT120I	GGNCC	5 cut(s)	223, 1100, 1243, 1498, 2110
BmiI	GGNNCC	8 cut(s)	115, 203, 325, 487, 567, 1233, 1500, 1986
BmrFI	CCNGG	1 cut(s)	432
BmsI	GCATC	4 cut(s)	661, 1239, 1334, 1579
BpiI	GAAGAC	1 cut(s)	780
BpmI	CTGGAG	4 cut(s)	923, 1077, 1695, 2003
Bpu10I	CCTNAGC	1 cut(s)	1386
Bpu14I	TTCGAA	1 cut(s)	1445
BsaAI	YACGTR	1 cut(s)	155
BsaHI	GRCGYC	3 cut(s)	65, 318, 324
BsaJI	CCNNGG	4 cut(s)	159, 339, 430, 614
BsaWI	WCCGGW	2 cut(s)	275, 1245
BsaXI	ACNNNNNCTCC	2 cut(s)	164, 194
Bsc4I	CCNNNNNNNGG	4 cut(s)	933, 1060, 1508, 1900
Bse118I	RCCGGY	2 cut(s)	140, 1972
Bse1I	ACTGG	6 cut(s)	1219, 1391, 1415, 1708, 1853, 1986
Bse3DI	GCAATG	2 cut(s)	665, 927
BseAI	TCCGGA	1 cut(s)	1245
BseBI	CCWGG	1 cut(s)	432
BseDI	CCNNGG	4 cut(s)	159, 339, 430, 614
BseGI	GGATG	5 cut(s)	489, 1069, 1254, 1849, 2098
BseLI	CCNNNNNNNGG	4 cut(s)	933, 1060, 1508, 1900
BseMI	GCAATG	2 cut(s)	665, 927
BseMII	CTCAG	2 cut(s)	1377, 1494
BseNI	ACTGG	6 cut(s)	1219, 1391, 1415, 1708, 1853, 1986
BseRI	GAGGAG	3 cut(s)	26, 88, 95
BseSI	GKGCMC	2 cut(s)	885, 2033
BseXI	GCAGC	7 cut(s)	367, 646, 649, 1527, 1707, 1835, 1918
BseYI	CCCAGC	1 cut(s)	1795
BsgI	GTGCAG	2 cut(s)	376, 740
Bsh1236I	CGCG	1 cut(s)	31
BshFI	GGCC	5 cut(s)	224, 309, 1118, 1848, 2111
BshNI	GGYRCC	1 cut(s)	323
BsiSI	CCGG	6 cut(s)	141, 237, 276, 649, 1246, 1973
BslFI	GGGAC	6 cut(s)	55, 61, 67, 73, 1367, 1782
BslI	CCNNNNNNNGG	4 cut(s)	933, 1060, 1508, 1900
BsmAI	GTCTC	2 cut(s)	306, 1619
BsmBI	CGTCTC	1 cut(s)	306
BsmFI	GGGAC	6 cut(s)	55, 61, 67, 73, 1367, 1782
BsmI	GAATGC	2 cut(s)	1252, 1566
BsnI	GGCC	5 cut(s)	224, 309, 1118, 1848, 2111
Bsp119I	TTCGAA	1 cut(s)	1445
Bsp1286I	GDGCHC	3 cut(s)	885, 1838, 2033
Bsp13I	TCCGGA	1 cut(s)	1245
Bsp1407I	TGTACA	2 cut(s)	517, 982
Bsp143I	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
Bsp19I	CCATGG	2 cut(s)	339, 614
BspANI	GGCC	5 cut(s)	224, 309, 1118, 1848, 2111
BspCNI	CTCAG	2 cut(s)	1378, 1495
BspEI	TCCGGA	1 cut(s)	1245
BspFNI	CGCG	1 cut(s)	31
BspLI	GGNNCC	8 cut(s)	115, 203, 325, 487, 567, 1233, 1500, 1986
BspMAI	CTGCAG	1 cut(s)	1729
BspPI	GGATC	4 cut(s)	277, 605, 1469, 1738
BspT104I	TTCGAA	1 cut(s)	1445
BspT107I	GGYRCC	1 cut(s)	323
BsrBI	CCGCTC	1 cut(s)	1509
BsrDI	GCAATG	2 cut(s)	665, 927
BsrFI	RCCGGY	2 cut(s)	140, 1972
BsrGI	TGTACA	2 cut(s)	517, 982
BsrI	ACTGG	6 cut(s)	1219, 1391, 1415, 1708, 1853, 1986
BssAI	RCCGGY	2 cut(s)	140, 1972
BssECI	CCNNGG	4 cut(s)	159, 339, 430, 614
BssMI	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
BssNI	GRCGYC	3 cut(s)	65, 318, 324
BssSI	CACGAG	3 cut(s)	287, 296, 1608
BssT1I	CCWWGG	3 cut(s)	159, 339, 614
Bst2BI	CACGAG	3 cut(s)	287, 296, 1608
Bst2UI	CCWGG	1 cut(s)	432
Bst4CI	ACNGT	7 cut(s)	538, 1349, 1597, 1630, 1760, 1963, 2035
BstACI	GRCGYC	3 cut(s)	65, 318, 324
BstAPI	GCANNNNNTGC	1 cut(s)	1940
BstAUI	TGTACA	2 cut(s)	517, 982
BstBAI	YACGTR	1 cut(s)	155
BstBI	TTCGAA	1 cut(s)	1445
BstC8I	GCNNGC	2 cut(s)	142, 1725
BstDEI	CTNAG	5 cut(s)	642, 1059, 1160, 1386, 1503
BstDSI	CCRYGG	2 cut(s)	339, 614
BstF5I	GGATG	5 cut(s)	489, 1069, 1254, 1849, 2098
BstFNI	CGCG	1 cut(s)	31
BstH2I	RGCGCY	1 cut(s)	327
BstHHI	GCGC	2 cut(s)	33, 326
BstKTI	GATC	9 cut(s)	285, 544, 598, 613, 715, 901, 1477, 1733, 2083
BstMAI	GTCTC	2 cut(s)	306, 1619
BstMBI	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
BstMWI	GCNNNNNNNGC	7 cut(s)	15, 315, 803, 929, 1733, 1895, 1940
BstNI	CCWGG	1 cut(s)	432
BstNSI	RCATGY	1 cut(s)	1289
BstSCI	CCNGG	1 cut(s)	430
BstSFI	CTRYAG	2 cut(s)	1725, 2016
BstSLI	GKGCMC	2 cut(s)	885, 2033
BstUI	CGCG	1 cut(s)	31
BstV1I	GCAGC	7 cut(s)	367, 646, 649, 1527, 1707, 1835, 1918
BstV2I	GAAGAC	1 cut(s)	780
BstX2I	RGATCY	3 cut(s)	282, 610, 1474
BstXI	CCANNNNNNTGG	1 cut(s)	346
BstYI	RGATCY	3 cut(s)	282, 610, 1474
BsuRI	GGCC	5 cut(s)	224, 309, 1118, 1848, 2111
BtgI	CCRYGG	2 cut(s)	339, 614
BtrI	CACGTC	1 cut(s)	190
BtsCI	GGATG	5 cut(s)	489, 1069, 1254, 1849, 2098
BtsIMutI	CAGTG	3 cut(s)	1212, 1398, 2031
Cac8I	GCNNGC	2 cut(s)	142, 1725
CfoI	GCGC	2 cut(s)	33, 326
Cfr10I	RCCGGY	2 cut(s)	140, 1972
Cfr13I	GGNCC	5 cut(s)	223, 1100, 1243, 1498, 2110
CseI	GACGC	2 cut(s)	73, 307
Csp6I	GTAC	4 cut(s)	518, 983, 1004, 2012
CviAII	CATG	8 cut(s)	340, 615, 656, 743, 955, 1286, 1366, 1895
CviQI	GTAC	4 cut(s)	518, 983, 1004, 2012
DdeI	CTNAG	5 cut(s)	642, 1059, 1160, 1386, 1503
DinI	GGCGCC	1 cut(s)	325
DpnI	GATC	9 cut(s)	284, 543, 597, 612, 714, 900, 1476, 1732, 2082
DpnII	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
DraI	TTTAAA	3 cut(s)	970, 1123, 1816
DriI	GACNNNNNGTC	1 cut(s)	1298
EaeI	YGGCCR	1 cut(s)	1846
Eam1105I	GACNNNNNGTC	1 cut(s)	1298
EciI	GGCGGA	2 cut(s)	116, 127
Eco130I	CCWWGG	3 cut(s)	159, 339, 614
Eco24I	GRGCYC	1 cut(s)	1838
Eco47I	GGWCC	3 cut(s)	1100, 1243, 1498
Eco57I	CTGAAG	2 cut(s)	1050, 1603
Eco72I	CACGTG	1 cut(s)	155
EcoRI	GAATTC	1 cut(s)	261
EcoRII	CCWGG	1 cut(s)	430
EcoT14I	CCWWGG	3 cut(s)	159, 339, 614
EcoT22I	ATGCAT	1 cut(s)	1254
EcoT38I	GRGCYC	1 cut(s)	1838
EgeI	GGCGCC	1 cut(s)	325
EheI	GGCGCC	1 cut(s)	325
ErhI	CCWWGG	3 cut(s)	159, 339, 614
Esp3I	CGTCTC	1 cut(s)	306
FaeI	CATG	8 cut(s)	343, 618, 659, 746, 958, 1289, 1369, 1898
FalI	AAGNNNNNCTT	2 cut(s)	855, 887
FaqI	GGGAC	6 cut(s)	55, 61, 67, 73, 1367, 1782
FatI	CATG	8 cut(s)	339, 614, 655, 742, 954, 1285, 1365, 1894
FauI	CCCGC	3 cut(s)	14, 23, 36
FbaI	TGATCA	1 cut(s)	2080
Fnu4HI	GCNGC	7 cut(s)	381, 660, 663, 1541, 1721, 1824, 1932
FokI	GGATG	5 cut(s)	476, 1076, 1261, 1836, 2105
FriOI	GRGCYC	1 cut(s)	1838
Fsp4HI	GCNGC	7 cut(s)	381, 660, 663, 1541, 1721, 1824, 1932
FspBI	CTAG	2 cut(s)	750, 1908
GlaI	GCGC	2 cut(s)	32, 325
GluI	GCNGC	7 cut(s)	381, 660, 663, 1541, 1721, 1824, 1932
GsaI	CCCAGC	1 cut(s)	1799
GsuI	CTGGAG	4 cut(s)	923, 1077, 1695, 2003
HaeII	RGCGCY	1 cut(s)	327
HaeIII	GGCC	5 cut(s)	224, 309, 1118, 1848, 2111
HapII	CCGG	6 cut(s)	141, 237, 276, 649, 1246, 1973
HgaI	GACGC	2 cut(s)	73, 307
HhaI	GCGC	2 cut(s)	33, 326
Hin1I	GRCGYC	3 cut(s)	65, 318, 324
Hin1II	CATG	8 cut(s)	343, 618, 659, 746, 958, 1289, 1369, 1898
Hin6I	GCGC	2 cut(s)	31, 324
HinP1I	GCGC	2 cut(s)	31, 324
HincII	GTYRAC	1 cut(s)	1152
HindII	GTYRAC	1 cut(s)	1152
HpaI	GTTAAC	1 cut(s)	1152
HpaII	CCGG	6 cut(s)	141, 237, 276, 649, 1246, 1973
HphI	GGTGA	5 cut(s)	244, 439, 1202, 1987, 2054
Hpy166II	GTNNAC	7 cut(s)	183, 518, 983, 1004, 1152, 1615, 1913
Hpy8I	GTNNAC	7 cut(s)	183, 518, 983, 1004, 1152, 1615, 1913
Hpy99I	CGWCG	3 cut(s)	67, 113, 323
HpyCH4III	ACNGT	7 cut(s)	538, 1349, 1597, 1630, 1760, 1963, 2035
HpyCH4IV	ACGT	4 cut(s)	154, 189, 438, 1639
HpyF10VI	GCNNNNNNNGC	7 cut(s)	15, 315, 803, 929, 1733, 1895, 1940
HpyF3I	CTNAG	5 cut(s)	642, 1059, 1160, 1386, 1503
HpySE526I	ACGT	4 cut(s)	154, 189, 438, 1639
Hsp92I	GRCGYC	3 cut(s)	65, 318, 324
Hsp92II	CATG	8 cut(s)	343, 618, 659, 746, 958, 1289, 1369, 1898
HspAI	GCGC	2 cut(s)	31, 324
KasI	GGCGCC	1 cut(s)	323
Kpn2I	TCCGGA	1 cut(s)	1245
KroI	GCCGGC	1 cut(s)	140
KroNI	GCCGGC	1 cut(s)	142
Ksp22I	TGATCA	1 cut(s)	2080
KspAI	GTTAAC	1 cut(s)	1152
Kzo9I	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
LmnI	GCTCC	7 cut(s)	119, 172, 207, 485, 605, 651, 1984
Lsp1109I	GCAGC	7 cut(s)	367, 646, 649, 1527, 1707, 1835, 1918
LweI	GCATC	4 cut(s)	661, 1239, 1334, 1579
MaeI	CTAG	2 cut(s)	750, 1908
MaeII	ACGT	4 cut(s)	154, 189, 438, 1639
MaeIII	GTNAC	4 cut(s)	434, 1037, 1630, 1699
MalI	GATC	9 cut(s)	284, 543, 597, 612, 714, 900, 1476, 1732, 2082
MbiI	CCGCTC	1 cut(s)	1509
MboI	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
MboII	GAAGA	5 cut(s)	701, 785, 887, 1079, 1484
MflI	RGATCY	3 cut(s)	282, 610, 1474
MhlI	GDGCHC	3 cut(s)	885, 1838, 2033
MlsI	TGGCCA	1 cut(s)	1848
MluNI	TGGCCA	1 cut(s)	1848
Mly113I	GGCGCC	1 cut(s)	324
MlyI	GAGTC	4 cut(s)	227, 329, 532, 2090
MmeI	TCCRAC	2 cut(s)	666, 1579
Mox20I	TGGCCA	1 cut(s)	1848
Mph1103I	ATGCAT	1 cut(s)	1254
MroI	TCCGGA	1 cut(s)	1245
MroNI	GCCGGC	1 cut(s)	140
MroXI	GAANNNNTTC	4 cut(s)	777, 867, 1566, 1863
MscI	TGGCCA	1 cut(s)	1848
MslI	CAYNNNNRTG	1 cut(s)	1257
Msp20I	TGGCCA	1 cut(s)	1848
MspA1I	CMGCKG	2 cut(s)	380, 1720
MspI	CCGG	6 cut(s)	141, 237, 276, 649, 1246, 1973
MspR9I	CCNGG	1 cut(s)	432
Mva1269I	GAATGC	2 cut(s)	1252, 1566
MvaI	CCWGG	1 cut(s)	432
MvnI	CGCG	1 cut(s)	31
MwoI	GCNNNNNNNGC	7 cut(s)	15, 315, 803, 929, 1733, 1895, 1940
NaeI	GCCGGC	1 cut(s)	142
NarI	GGCGCC	1 cut(s)	324
NcoI	CCATGG	2 cut(s)	339, 614
NdeII	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
NgoMIV	GCCGGC	1 cut(s)	140
NlaIII	CATG	8 cut(s)	343, 618, 659, 746, 958, 1289, 1369, 1898
NlaIV	GGNNCC	8 cut(s)	115, 203, 325, 487, 567, 1233, 1500, 1986
NmeAIII	GCCGAG	2 cut(s)	200, 335
NmuCI	GTSAC	1 cut(s)	434
NsiI	ATGCAT	1 cut(s)	1254
NspI	RCATGY	1 cut(s)	1289
NspV	TTCGAA	1 cut(s)	1445
PcsI	WCGNNNNNNNCGW	2 cut(s)	71, 294
PctI	GAATGC	2 cut(s)	1252, 1566
PdiI	GCCGGC	1 cut(s)	142
PdmI	GAANNNNTTC	4 cut(s)	777, 867, 1566, 1863
PfeI	GAWTC	7 cut(s)	216, 292, 628, 1164, 1427, 1456, 1904
PflFI	GACNNNGTC	3 cut(s)	67, 317, 1683
PflMI	CCANNNNNTGG	1 cut(s)	1900
PkrI	GCNGC	7 cut(s)	382, 661, 664, 1542, 1722, 1825, 1933
PleI	GAGTC	4 cut(s)	227, 329, 531, 2090
PluTI	GGCGCC	1 cut(s)	327
PmaCI	CACGTG	1 cut(s)	155
PmlI	CACGTG	1 cut(s)	155
PpsI	GAGTC	4 cut(s)	227, 329, 531, 2090
Ppu21I	YACGTR	1 cut(s)	155
PshBI	ATTAAT	1 cut(s)	1841
PsiI	TTATAA	1 cut(s)	584
Psp6I	CCWGG	1 cut(s)	430
PspCI	CACGTG	1 cut(s)	155
PspFI	CCCAGC	1 cut(s)	1795
PspGI	CCWGG	1 cut(s)	430
PspN4I	GGNNCC	8 cut(s)	115, 203, 325, 487, 567, 1233, 1500, 1986
PspPI	GGNCC	5 cut(s)	223, 1100, 1243, 1498, 2110
PstI	CTGCAG	1 cut(s)	1729
PsuI	RGATCY	3 cut(s)	282, 610, 1474
PsyI	GACNNNGTC	3 cut(s)	67, 317, 1683
RsaI	GTAC	4 cut(s)	519, 984, 1005, 2013
RsaNI	GTAC	4 cut(s)	518, 983, 1004, 2012
RseI	CAYNNNNRTG	1 cut(s)	1257
SatI	GCNGC	7 cut(s)	381, 660, 663, 1541, 1721, 1824, 1932
Sau3AI	GATC	9 cut(s)	282, 541, 595, 610, 712, 898, 1474, 1730, 2080
Sau96I	GGNCC	5 cut(s)	223, 1100, 1243, 1498, 2110
SbfI	CCTGCAGG	1 cut(s)	1729
SchI	GAGTC	4 cut(s)	227, 329, 532, 2090
ScrFI	CCNGG	1 cut(s)	432
SdaI	CCTGCAGG	1 cut(s)	1729
SduI	GDGCHC	3 cut(s)	885, 1838, 2033
SfaNI	GCATC	4 cut(s)	661, 1239, 1334, 1579
SfcI	CTRYAG	2 cut(s)	1725, 2016
SfoI	GGCGCC	1 cut(s)	325
SfuI	TTCGAA	1 cut(s)	1445
SinI	GGWCC	3 cut(s)	1100, 1243, 1498
SmiMI	CAYNNNNRTG	1 cut(s)	1257
Sse8387I	CCTGCAGG	1 cut(s)	1729
SspDI	GGCGCC	1 cut(s)	323
SspMI	CTAG	2 cut(s)	750, 1908
StyD4I	CCNGG	1 cut(s)	430
StyI	CCWWGG	3 cut(s)	159, 339, 614
TaaI	ACNGT	7 cut(s)	538, 1349, 1597, 1630, 1760, 1963, 2035
TaiI	ACGT	4 cut(s)	157, 192, 441, 1642
TaqI	TCGA	4 cut(s)	231, 598, 1445, 1713
TatI	WGTACW	3 cut(s)	517, 982, 1003
TfiI	GAWTC	7 cut(s)	216, 292, 628, 1164, 1427, 1456, 1904
TscAI	CASTG	3 cut(s)	1219, 1398, 2038
TseFI	GTSAC	1 cut(s)	434
TseI	GCWGC	7 cut(s)	380, 659, 662, 1540, 1720, 1823, 1931
Tsp45I	GTSAC	1 cut(s)	434
TspDTI	ATGAA	7 cut(s)	566, 731, 943, 1080, 1185, 1186, 1391
TspGWI	ACGGA	3 cut(s)	200, 1198, 1475
TspRI	CASTG	3 cut(s)	1219, 1398, 2038
Tth111I	GACNNNGTC	3 cut(s)	67, 317, 1683
Van91I	CCANNNNNTGG	1 cut(s)	1900
VpaK11BI	GGWCC	3 cut(s)	1100, 1243, 1498
VspI	ATTAAT	1 cut(s)	1841
XapI	RAATTY	5 cut(s)	261, 938, 1748, 1786, 2021
XceI	RCATGY	1 cut(s)	1289
XmnI	GAANNNNTTC	4 cut(s)	777, 867, 1566, 1863
XspI	CTAG	2 cut(s)	750, 1908
Zsp2I	ATGCAT	1 cut(s)	1254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.