RchiOBHm_Chr1g0359841
ERF Family

A domain family that is part of the cupin metalloenzyme superfamily.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0002674
Physical Location & Seq
Reverse (-)
51662103 .. 51670948
8846 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2643 bp
ATGAAGAAGAGTAAACTAAAAGAGGAAAAGCCAATGGAAGAGGGTAAGTCTAACAAAAACAAGGGGAGCTTGATGTGTCACCAGTGTCAGCGGAACGATAAGAGTGGTGTTGTACACTGCTCTCTGTGTAAATCAAAGCGGTTTTGCTATGAGTGCATTGAAAGATGGTACCCTGGGAAATCAAGAGAGGAATTTGAGGATGCTTGCCCATTTTGCCGTGGCAACTGCAACTGCAAAGCGTGCCTGCGCGAGTTTTTGGTTAAACCTTGCCGAGAAGTTGAGCCCAGTGTTAAGTTACAGCGACTGCGTTACCTGTTATATAAGGCTTTACCTGTGCTGAGGCATATATATAGTGAGCAGAGCTCTGAACTGGAGATAGAAGCCAAAATCAGAGGTGTACACTTGACTGAACTGGACATAAAGAGAACTAAAGTACACCAAAAGGAGCGAATGTACTGTGACAATTGTTCTACATCTATTGTGGATTTCCACAGAAGCTGTCCAAACCCCAATTGTTCCTATGACCTGTGTCTTACTTGTTGCAAAGAGCTAAGGGACGGTCGGCAACCTGGAGGTAATGAAGGAGAAACATCTCACCAGCAAGCTCTAGAAAGAGCTCATAAAGAAGTGAAAGGACATTGCTCGGAGAGTAAAGTTGCCTCTACTTCTGATGATTCTAAAGTGGACCCATCCATTTCTTTTCCTAATTGGAGAGCTGATTCTGATGGCAGTATTCCATGTCCTCCAAAAGAACGTGGAGGTTGTGGCAATGGGAAGCTGGAATTGAGGCGTAAATTCAAGGCTAATTGGGTAATGAAGCTGCTAAAAAATGCAGAAGATGTTACTACTGACTTCAAGTGGCAAGAAGTTGATATTTCTCAAGGATGTTCCTGGTGCCAGCCAAATGATTCCGAGGAAACCAATGATAGGAAGCCTGAAAGGAGGCAAGCAGCTTTCAGGAAAAACAGTCATGATAACTTCTTATACTGTTCAGATGCTATTGACATTTCAGATGATGAGATCGAGCATTTTCAGAGGCACTGGATGAAAGGGGAACCAGTGATTGTCAGAAATGTTCTTGACAAGACATCTGGTCTTAGTTGGGAACCTATGGTTATGTGGAGGGCTTTTAGAGAAACGGGTGCTAAAGTAAAGTTCAAAGAGGAGACAAAAAGTGTAAAAGCCATTGATTGCTTGGATTGGAATGAGGTTGAGATTAATATTCACCAATTTTTCACGGGCTACTTAGCGGGTCGCATGCATAAAGATAAGTGGCCAGAGATGTTAAAATTAAAGGATTGGCCATCATCAACTTTGTTTGAGGAACGCTTGCCAAGACACTGTGCGGAATTCATTGCAGCGCTCCCCTACAGTGACTATACTGATCCCAAAGATTCAAATGCTGGTATTCTCAATCTAGCTACAAGACTTCCTGAAGGGTCGCTGAAACCTGATATGGGACCAAAAACATACATTGCTTATGGATTCTCCGAAGAGCTTGGTAGAGGTGATTCAGTGACTAAGCTGCACTGTGATATGTCTGATGCGGTAAATGTTCTGACACACACAGCAACAGTGAAGATTGAGCCGTGGCAGCACAATGCCATAAAGAATGTGAAGAGCAAACATGAAGCTGAAGACCTTTGTGATCTCTACAATGAAAAAAATCACAAAAAGGGCAGGGTTAGAGGAACATTGTTGAAGAAAACTCGCAACGTCCTGGTTAAGGGTGCTGATTCTTCTGAATATACTAAAAGTGGTAAAGTTGTGGAGAATGACCATCTAGTGTCAACTCTGCAGGATGGGAAGGGAAACAAACTGGACAGAGCACAGTCATGTAGAACTTCACTTTTGTCAGATTCTGTCGATCCAGGCATCCTTAGATCTGACGAAACAGAACATGTTCCGGAACCTCTTGCTACTACTGAACTAAATGAAGTAAAGGTTGCGAGTGTTGGTCATCAGAGGAATGATGTGCTAAAATCCACCTCGCCTCGTGCAAATGGAGTTGAAAAAGAGCAAGAGTGTGCTCAATGTTCCAGTGACATGATCAGTGGAAGGCTTGAAGGGAAAGATGCTTCAAGGGATGCAAGTGTAAACACACATGCAACAAAGGATTTCAAAGGTAGTGACAAGTTGGACATTGTCCATGGTGGTGCTGTTTGGGACATCTTTCGTATCCAGGACACTCCCAAGTTAATAGAGTACCTGGAGAAACACAAAAAAGAATTTCGCCACCTTAATAATCATCCTGTAGATTCTGTTGTTCATCCTATTCATGATCAGACTCTGTACTTGAATGAGAGACATAAGAAACAACTAAAGGAGGAGTTCGATGTGGAGCCTTGGACATTTGAGCAACATCTTGGTGAGGCAGTTTTTATTCCAGCTGGATGTCCTCATCAAGTGAGAAATAGACAATCTTGTATAAAGGTAGCACTTGATTTTGTATCTCCTGAGAATCTTGAAGTATGTCTGCGATTAACTGAAGAGTTCCGTTTACTCCCAAAAACCCACAGAGCCAAGGAAGATAAATTGGAGGTGAAGAAGATGACACTCTATGCTGTAAGTTCAGCACTTCGAGAAGCCAAAAATTTGATGCCGGGGCTTGGAACGTCAAATGCCGAGAAAGATGACAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005102 GO:0005488 GO:0005506 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006081 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0007154 GO:0007165 GO:0008134 GO:0008150 GO:0008152 GO:0008214 GO:0009058 GO:0009719 GO:0009725 GO:0009755 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0014070 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0016999 GO:0017000 GO:0017144 GO:0019219 GO:0019222 GO:0019538 GO:0023052 GO:0030518 GO:0030521 GO:0030522 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0032870 GO:0033169 GO:0033993 GO:0035257 GO:0035258 GO:0036211 GO:0042221 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0045893 GO:0045935 GO:0046184 GO:0046292 GO:0046293 GO:0046872 GO:0046914 GO:0048518 GO:0048522 GO:0048545 GO:0050681 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051276 GO:0051427 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070887 GO:0070988 GO:0071310 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC WRC zf-4CXXC_R1

Protein Analysis

880

Amino Acids

100.42

Weight (kDa)

7.49

Isoelectric Point (pI)

42.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-4CXXC_R1 PF10497 23 - 93 9.5e-06 Zinc-finger domain of monoamine-oxidase A repressor R1
JmjC PF02373 720 - 816 1.7e-15 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 168
AccB1I GGYRCC 2 cut(s) 168, 894
AccII CGCG 1 cut(s) 249
AccIII TCCGGA 1 cut(s) 1906
AciI CCGC 5 cut(s) 91, 139, 1250, 1346, 1547
AclWI GGATC 2 cut(s) 1379, 1862
AcoI YGGCCR 2 cut(s) 1274, 1301
AcsI RAATTY 5 cut(s) 191, 794, 1349, 2228, 2593
AcuI CTGAAG 3 cut(s) 1455, 1656, 2508
AfaI GTAC 7 cut(s) 114, 170, 399, 435, 455, 2207, 2294
AfeI AGCGCT 1 cut(s) 1362
AfiI CCNNNNNNNGG 4 cut(s) 927, 1457, 1726, 2609
AflIII ACRYGT 1 cut(s) 1900
AhdI GACNNNNNGTC 1 cut(s) 1092
AjnI CCWGG 7 cut(s) 172, 568, 890, 1719, 1870, 2181, 2208
Alw21I GWGCWC 4 cut(s) 365, 619, 1831, 2032
Alw26I GTCTC 2 cut(s) 1160, 2299
AlwI GGATC 2 cut(s) 1379, 1862
AlwNI CAGNNNCTG 4 cut(s) 304, 498, 1862, 2290
Aor13HI TCCGGA 1 cut(s) 1906
Aor51HI AGCGCT 1 cut(s) 1362
AoxI GGCC 2 cut(s) 1274, 1301
ApeKI GCWGC 5 cut(s) 820, 950, 1358, 1525, 1594
ApoI RAATTY 5 cut(s) 191, 794, 1349, 2228, 2593
AseI ATTAAT 1 cut(s) 1218
Asp700I GAANNNNTTC 1 cut(s) 1902
Asp718I GGTACC 1 cut(s) 168
AspLEI GCGC 2 cut(s) 249, 1363
AspS9I GGNCC 2 cut(s) 685, 1460
AsuC2I CCSGG 1 cut(s) 2604
AsuHPI GGTGA 6 cut(s) 71, 587, 1217, 1520, 2381, 2554
AvaII GGWCC 2 cut(s) 685, 1460
BalI TGGCCA 2 cut(s) 1276, 1303
BanI GGYRCC 2 cut(s) 168, 894
BanII GRGCYC 3 cut(s) 285, 365, 619
BauI CACGAG 1 cut(s) 1995
BbsI GAAGAC 1 cut(s) 1644
Bbv12I GWGCWC 4 cut(s) 365, 619, 1831, 2032
BbvCI CCTCAGC 1 cut(s) 338
BbvI GCAGC 5 cut(s) 807, 962, 1370, 1512, 1606
BccI CCATC 6 cut(s) 159, 697, 719, 1312, 1788, 1796
BceAI ACGGC 2 cut(s) 201, 1573
BciT130I CCWGG 7 cut(s) 174, 570, 892, 1721, 1872, 2183, 2210
BciVI GTATCC 1 cut(s) 2189
BclI TGATCA 2 cut(s) 2049, 2281
BcnI CCSGG 1 cut(s) 2604
BcoDI GTCTC 2 cut(s) 1160, 2299
BfaI CTAG 3 cut(s) 608, 1418, 1784
BfmI CTRYAG 3 cut(s) 1369, 1796, 2253
BfoI RGCGCY 1 cut(s) 1364
BfuI GTATCC 1 cut(s) 2189
BglII AGATCT 1 cut(s) 1883
BisI GCNGC 5 cut(s) 821, 951, 1359, 1526, 1595
BlsI GCNGC 5 cut(s) 822, 952, 1360, 1527, 1596
Bme1390I CCNGG 8 cut(s) 174, 570, 892, 1721, 1872, 2183, 2210, 2604
Bme18I GGWCC 2 cut(s) 685, 1460
BmeRI GACNNNNNGTC 1 cut(s) 1092
BmgT120I GGNCC 2 cut(s) 685, 1460
BmiI GGNNCC 8 cut(s) 170, 687, 896, 1056, 1107, 1461, 1911, 2343
BmrFI CCNGG 8 cut(s) 174, 570, 892, 1721, 1872, 2183, 2210, 2604
BmrI ACTGGG 1 cut(s) 279
BmsI GCATC 7 cut(s) 190, 985, 1534, 1884, 2065, 2077, 2589
BmuI ACTGGG 1 cut(s) 279
BoxI GACNNNNGTC 1 cut(s) 528
BpiI GAAGAC 1 cut(s) 1644
BplI GAGNNNNNCTC 2 cut(s) 347, 379
BpmI CTGGAG 3 cut(s) 392, 591, 2231
Bpu10I CCTNAGC 2 cut(s) 338, 551
BpuEI CTTGAG 1 cut(s) 864
BpuMI CCSGG 1 cut(s) 2604
BsaJI CCNNGG 9 cut(s) 172, 173, 217, 912, 1589, 2149, 2345, 2523, 2603
BsaWI WCCGGW 1 cut(s) 1906
BsaXI ACNNNNNCTCC 2 cut(s) 437, 467
Bsc4I CCNNNNNNNGG 4 cut(s) 927, 1457, 1726, 2609
Bse1I ACTGG 8 cut(s) 82, 285, 375, 417, 1046, 1058, 1824, 2040
Bse3DI GCAATG 4 cut(s) 637, 775, 1353, 1473
BseAI TCCGGA 1 cut(s) 1906
BseBI CCWGG 7 cut(s) 174, 570, 892, 1721, 1872, 2183, 2210
BseDI CCNNGG 9 cut(s) 172, 173, 217, 912, 1589, 2149, 2345, 2523, 2603
BseLI CCNNNNNNNGG 4 cut(s) 927, 1457, 1726, 2609
BseMI GCAATG 4 cut(s) 637, 775, 1353, 1473
BseMII CTCAG 2 cut(s) 329, 2448
BseNI ACTGG 8 cut(s) 82, 285, 375, 417, 1046, 1058, 1824, 2040
BseRI GAGGAG 2 cut(s) 1178, 2342
BseXI GCAGC 5 cut(s) 807, 962, 1370, 1512, 1606
BsgI GTGCAG 1 cut(s) 1511
Bsh1236I CGCG 1 cut(s) 249
Bsh1285I CGRYCG 1 cut(s) 562
BshFI GGCC 2 cut(s) 1276, 1303
BshNI GGYRCC 2 cut(s) 168, 894
BsiEI CGRYCG 1 cut(s) 562
BsiHKAI GWGCWC 4 cut(s) 365, 619, 1831, 2032
BsiSI CCGG 2 cut(s) 1907, 2603
BslFI GGGAC 3 cut(s) 569, 1473, 2180
BslI CCNNNNNNNGG 4 cut(s) 927, 1457, 1726, 2609
BsmAI GTCTC 2 cut(s) 1160, 2299
BsmFI GGGAC 3 cut(s) 569, 1473, 2180
BsnI GGCC 2 cut(s) 1276, 1303
Bsp1286I GDGCHC 5 cut(s) 285, 365, 619, 1831, 2032
Bsp13I TCCGGA 1 cut(s) 1906
Bsp1407I TGTACA 2 cut(s) 112, 397
Bsp143I GATC 7 cut(s) 1020, 1384, 1648, 1867, 1883, 2049, 2281
Bsp19I CCATGG 1 cut(s) 2149
BspACI CCGC 5 cut(s) 91, 139, 1250, 1346, 1547
BspANI GGCC 2 cut(s) 1276, 1303
BspCNI CTCAG 2 cut(s) 330, 2449
BspEI TCCGGA 1 cut(s) 1906
BspFNI CGCG 1 cut(s) 249
BspHI TCATGA 2 cut(s) 970, 2278
BspLI GGNNCC 8 cut(s) 170, 687, 896, 1056, 1107, 1461, 1911, 2343
BspMAI CTGCAG 1 cut(s) 1800
BspPI GGATC 2 cut(s) 1379, 1862
BspQI GCTCTTC 2 cut(s) 1488, 1613
BspT107I GGYRCC 2 cut(s) 168, 894
BsrDI GCAATG 4 cut(s) 637, 775, 1353, 1473
BsrGI TGTACA 2 cut(s) 112, 397
BsrI ACTGG 8 cut(s) 82, 285, 375, 417, 1046, 1058, 1824, 2040
BssECI CCNNGG 9 cut(s) 172, 173, 217, 912, 1589, 2149, 2345, 2523, 2603
BssMI GATC 7 cut(s) 1020, 1384, 1648, 1867, 1883, 2049, 2281
BssSI CACGAG 1 cut(s) 1995
BssT1I CCWWGG 3 cut(s) 2149, 2345, 2523
Bst2BI CACGAG 1 cut(s) 1995
Bst2UI CCWGG 7 cut(s) 174, 570, 892, 1721, 1872, 2183, 2210
Bst4CI ACNGT 9 cut(s) 458, 560, 968, 989, 1343, 1373, 1532, 1576, 1833
Bst6I CTCTTC 5 cut(s) 2, 33, 1488, 1613, 2484
BstAPI GCANNNNNTGC 1 cut(s) 240
BstAUI TGTACA 2 cut(s) 112, 397
BstC8I GCNNGC 8 cut(s) 205, 241, 245, 603, 899, 948, 1259, 1331
BstDEI CTNAG 7 cut(s) 338, 551, 1097, 1246, 1521, 1880, 2457
BstDSI CCRYGG 3 cut(s) 217, 1589, 2149
BstENI CCTNNNNNAGG 1 cut(s) 1724
BstFNI CGCG 1 cut(s) 249
BstH2I RGCGCY 1 cut(s) 1364
BstHHI GCGC 2 cut(s) 249, 1363
BstKTI GATC 7 cut(s) 1023, 1387, 1651, 1870, 1886, 2052, 2284
BstMAI GTCTC 2 cut(s) 1160, 2299
BstMBI GATC 7 cut(s) 1020, 1384, 1648, 1867, 1883, 2049, 2281
BstMCI CGRYCG 1 cut(s) 562
BstMWI GCNNNNNNNGC 4 cut(s) 153, 213, 240, 1594
BstNI CCWGG 7 cut(s) 174, 570, 892, 1721, 1872, 2183, 2210
BstNSI RCATGY 3 cut(s) 1261, 1904, 2108
BstPAI GACNNNNGTC 1 cut(s) 528
BstSCI CCNGG 8 cut(s) 172, 568, 890, 1719, 1870, 2181, 2208, 2602
BstSFI CTRYAG 3 cut(s) 1369, 1796, 2253
BstUI CGCG 1 cut(s) 249
BstV1I GCAGC 5 cut(s) 807, 962, 1370, 1512, 1606
BstV2I GAAGAC 1 cut(s) 1644
BstX2I RGATCY 1 cut(s) 1883
BstYI RGATCY 1 cut(s) 1883
BsuI GTATCC 1 cut(s) 2189
BsuRI GGCC 2 cut(s) 1276, 1303
BtgI CCRYGG 3 cut(s) 217, 1589, 2149
BtsI GCAGTG 1 cut(s) 115
Cac8I GCNNGC 8 cut(s) 205, 241, 245, 603, 899, 948, 1259, 1331
CaiI CAGNNNCTG 4 cut(s) 304, 498, 1862, 2290
CciI TCATGA 2 cut(s) 970, 2278
CfoI GCGC 2 cut(s) 249, 1363
Cfr13I GGNCC 2 cut(s) 685, 1460
Csp6I GTAC 7 cut(s) 113, 169, 398, 434, 454, 2206, 2293
CviQI GTAC 7 cut(s) 113, 169, 398, 434, 454, 2206, 2293
DdeI CTNAG 7 cut(s) 338, 551, 1097, 1246, 1521, 1880, 2457
DpnI GATC 7 cut(s) 1022, 1386, 1650, 1869, 1885, 2051, 2283
DpnII GATC 7 cut(s) 1020, 1384, 1648, 1867, 1883, 2049, 2281
DriI GACNNNNNGTC 1 cut(s) 1092
EaeI YGGCCR 2 cut(s) 1274, 1301
Eam1104I CTCTTC 5 cut(s) 2, 33, 1488, 1613, 2484
Eam1105I GACNNNNNGTC 1 cut(s) 1092
EarI CTCTTC 5 cut(s) 2, 33, 1488, 1613, 2484
Ecl136II GAGCTC 2 cut(s) 363, 617
Eco130I CCWWGG 3 cut(s) 2149, 2345, 2523
Eco24I GRGCYC 3 cut(s) 285, 365, 619
Eco47I GGWCC 2 cut(s) 685, 1460
Eco47III AGCGCT 1 cut(s) 1362
Eco53kI GAGCTC 2 cut(s) 363, 617
Eco57I CTGAAG 3 cut(s) 1455, 1656, 2508
EcoICRI GAGCTC 2 cut(s) 363, 617
EcoNI CCTNNNNNAGG 1 cut(s) 1724
EcoRI GAATTC 1 cut(s) 1349
EcoRII CCWGG 7 cut(s) 172, 568, 890, 1719, 1870, 2181, 2208
EcoT14I CCWWGG 3 cut(s) 2149, 2345, 2523
EcoT22I ATGCAT 1 cut(s) 1263
EcoT38I GRGCYC 3 cut(s) 285, 365, 619
ErhI CCWWGG 3 cut(s) 2149, 2345, 2523
FalI AAGNNNNNCTT 2 cut(s) 53, 85
FaqI GGGAC 3 cut(s) 569, 1473, 2180
FauI CCCGC 1 cut(s) 1243
FbaI TGATCA 2 cut(s) 2049, 2281
Fnu4HI GCNGC 5 cut(s) 821, 951, 1359, 1526, 1595
FriOI GRGCYC 3 cut(s) 285, 365, 619
Fsp4HI GCNGC 5 cut(s) 821, 951, 1359, 1526, 1595
FspBI CTAG 3 cut(s) 608, 1418, 1784
GlaI GCGC 2 cut(s) 248, 1362
GluI GCNGC 5 cut(s) 821, 951, 1359, 1526, 1595
GsuI CTGGAG 3 cut(s) 392, 591, 2231
HaeII RGCGCY 1 cut(s) 1364
HaeIII GGCC 2 cut(s) 1276, 1303
HapII CCGG 2 cut(s) 1907, 2603
HhaI GCGC 2 cut(s) 249, 1363
Hin6I GCGC 2 cut(s) 247, 1361
HinP1I GCGC 2 cut(s) 247, 1361
HincII GTYRAC 1 cut(s) 1791
HindII GTYRAC 1 cut(s) 1791
HpaII CCGG 2 cut(s) 1907, 2603
HphI GGTGA 6 cut(s) 71, 587, 1217, 1520, 2381, 2554
Hpy166II GTNNAC 9 cut(s) 14, 115, 398, 400, 436, 685, 1791, 2098, 2501
Hpy8I GTNNAC 9 cut(s) 14, 115, 398, 400, 436, 685, 1791, 2098, 2501
HpyAV CCTTC 5 cut(s) 575, 1430, 1801, 2052, 2060
HpyCH4III ACNGT 9 cut(s) 458, 560, 968, 989, 1343, 1373, 1532, 1576, 1833
HpyCH4IV ACGT 3 cut(s) 754, 1716, 2615
HpyF10VI GCNNNNNNNGC 4 cut(s) 153, 213, 240, 1594
HpyF3I CTNAG 7 cut(s) 338, 551, 1097, 1246, 1521, 1880, 2457
HpySE526I ACGT 3 cut(s) 754, 1716, 2615
HspAI GCGC 2 cut(s) 247, 1361
Kpn2I TCCGGA 1 cut(s) 1906
KpnI GGTACC 1 cut(s) 172
Ksp22I TGATCA 2 cut(s) 2049, 2281
Kzo9I GATC 7 cut(s) 1020, 1384, 1648, 1867, 1883, 2049, 2281
LguI GCTCTTC 2 cut(s) 1488, 1613
LmnI GCTCC 4 cut(s) 66, 445, 1368, 2341
Lsp1109I GCAGC 5 cut(s) 807, 962, 1370, 1512, 1606
LweI GCATC 7 cut(s) 190, 985, 1534, 1884, 2065, 2077, 2589
MaeI CTAG 3 cut(s) 608, 1418, 1784
MaeII ACGT 3 cut(s) 754, 1716, 2615
MaeIII GTNAC 9 cut(s) 77, 294, 308, 458, 841, 1373, 1516, 2042, 2129
MalI GATC 7 cut(s) 1022, 1386, 1650, 1869, 1885, 2051, 2283
MboI GATC 7 cut(s) 1020, 1384, 1648, 1867, 1883, 2049, 2281
MfeI CAATTG 2 cut(s) 463, 511
MflI RGATCY 1 cut(s) 1883
MhlI GDGCHC 5 cut(s) 285, 365, 619, 1831, 2032
MlsI TGGCCA 2 cut(s) 1276, 1303
MluNI TGGCCA 2 cut(s) 1276, 1303
MlyI GAGTC 1 cut(s) 2281
MmeI TCCRAC 1 cut(s) 2118
Mox20I TGGCCA 2 cut(s) 1276, 1303
Mph1103I ATGCAT 1 cut(s) 1263
MroI TCCGGA 1 cut(s) 1906
MroXI GAANNNNTTC 1 cut(s) 1902
MscI TGGCCA 2 cut(s) 1276, 1303
MseI TTAA 9 cut(s) 261, 291, 1218, 1286, 1292, 1725, 2198, 2241, 2483
MslI CAYNNNNRTG 3 cut(s) 1834, 2154, 2367
Msp20I TGGCCA 2 cut(s) 1276, 1303
MspA1I CMGCKG 2 cut(s) 91, 2390
MspI CCGG 2 cut(s) 1907, 2603
MspR9I CCNGG 8 cut(s) 174, 570, 892, 1721, 1872, 2183, 2210, 2604
MunI CAATTG 2 cut(s) 463, 511
MvaI CCWGG 7 cut(s) 174, 570, 892, 1721, 1872, 2183, 2210
MvnI CGCG 1 cut(s) 249
MwoI GCNNNNNNNGC 4 cut(s) 153, 213, 240, 1594
NciI CCSGG 1 cut(s) 2604
NcoI CCATGG 1 cut(s) 2149
NdeII GATC 7 cut(s) 1020, 1384, 1648, 1867, 1883, 2049, 2281
NlaIV GGNNCC 8 cut(s) 170, 687, 896, 1056, 1107, 1461, 1911, 2343
NmeAIII GCCGAG 1 cut(s) 296
NmuCI GTSAC 6 cut(s) 77, 458, 1373, 1516, 2042, 2129
NsiI ATGCAT 1 cut(s) 1263
NspI RCATGY 3 cut(s) 1261, 1904, 2108
PaeI GCATGC 1 cut(s) 1261
PagI TCATGA 2 cut(s) 970, 2278
PasI CCCWGGG 1 cut(s) 173
PciI ACATGT 1 cut(s) 1900
PciSI GCTCTTC 2 cut(s) 1488, 1613
PdmI GAANNNNTTC 1 cut(s) 1902
PflFI GACNNNGTC 1 cut(s) 2144
PfoI TCCNGGA 1 cut(s) 2181
PkrI GCNGC 5 cut(s) 822, 952, 1360, 1527, 1596
PleI GAGTC 1 cut(s) 2281
PpsI GAGTC 1 cut(s) 2281
PscI ACATGT 1 cut(s) 1900
PshAI GACNNNNGTC 1 cut(s) 528
PshBI ATTAAT 1 cut(s) 1218
Psp124BI GAGCTC 2 cut(s) 365, 619
Psp6I CCWGG 7 cut(s) 172, 568, 890, 1719, 1870, 2181, 2208
PspGI CCWGG 7 cut(s) 172, 568, 890, 1719, 1870, 2181, 2208
PspN4I GGNNCC 8 cut(s) 170, 687, 896, 1056, 1107, 1461, 1911, 2343
PspPI GGNCC 2 cut(s) 685, 1460
PstI CTGCAG 1 cut(s) 1800
PstNI CAGNNNCTG 4 cut(s) 304, 498, 1862, 2290
PsuI RGATCY 1 cut(s) 1883
PsyI GACNNNGTC 1 cut(s) 2144
PvuII CAGCTG 1 cut(s) 2390
RsaI GTAC 7 cut(s) 114, 170, 399, 435, 455, 2207, 2294
RsaNI GTAC 7 cut(s) 113, 169, 398, 434, 454, 2206, 2293
RseI CAYNNNNRTG 3 cut(s) 1834, 2154, 2367
SacI GAGCTC 2 cut(s) 365, 619
SapI GCTCTTC 2 cut(s) 1488, 1613
SaqAI TTAA 9 cut(s) 261, 291, 1218, 1286, 1292, 1725, 2198, 2241, 2483
SatI GCNGC 5 cut(s) 821, 951, 1359, 1526, 1595
Sau3AI GATC 7 cut(s) 1020, 1384, 1648, 1867, 1883, 2049, 2281
Sau96I GGNCC 2 cut(s) 685, 1460
SchI GAGTC 1 cut(s) 2281
ScrFI CCNGG 8 cut(s) 174, 570, 892, 1721, 1872, 2183, 2210, 2604
SduI GDGCHC 5 cut(s) 285, 365, 619, 1831, 2032
SfaNI GCATC 7 cut(s) 190, 985, 1534, 1884, 2065, 2077, 2589
SfcI CTRYAG 3 cut(s) 1369, 1796, 2253
SinI GGWCC 2 cut(s) 685, 1460
SmiMI CAYNNNNRTG 3 cut(s) 1834, 2154, 2367
SmlI CTYRAG 1 cut(s) 879
SmoI CTYRAG 1 cut(s) 879
SphI GCATGC 1 cut(s) 1261
SsiI CCGC 5 cut(s) 91, 139, 1250, 1346, 1547
SspI AATATT 1 cut(s) 1222
SspMI CTAG 3 cut(s) 608, 1418, 1784
SstI GAGCTC 2 cut(s) 365, 619
StyD4I CCNGG 8 cut(s) 172, 568, 890, 1719, 1870, 2181, 2208, 2602
StyI CCWWGG 3 cut(s) 2149, 2345, 2523
TaaI ACNGT 9 cut(s) 458, 560, 968, 989, 1343, 1373, 1532, 1576, 1833
TaiI ACGT 3 cut(s) 757, 1719, 2618
TaqI TCGA 4 cut(s) 1023, 1866, 2334, 2581
TatI WGTACW 5 cut(s) 112, 397, 433, 453, 2292
Tru1I TTAA 9 cut(s) 261, 291, 1218, 1286, 1292, 1725, 2198, 2241, 2483
Tru9I TTAA 9 cut(s) 261, 291, 1218, 1286, 1292, 1725, 2198, 2241, 2483
TseFI GTSAC 6 cut(s) 77, 458, 1373, 1516, 2042, 2129
TseI GCWGC 5 cut(s) 820, 950, 1358, 1525, 1594
Tsp45I GTSAC 6 cut(s) 77, 458, 1373, 1516, 2042, 2129
TspGWI ACGGA 1 cut(s) 2486
Tth111I GACNNNGTC 1 cut(s) 2144
VpaK11BI GGWCC 2 cut(s) 685, 1460
VspI ATTAAT 1 cut(s) 1218
XagI CCTNNNNNAGG 1 cut(s) 1724
XapI RAATTY 5 cut(s) 191, 794, 1349, 2228, 2593
XbaI TCTAGA 1 cut(s) 607
XceI RCATGY 3 cut(s) 1261, 1904, 2108
XcmI CCANNNNNNNNNTGG 1 cut(s) 1192
XmnI GAANNNNTTC 1 cut(s) 1902
XspI CTAG 3 cut(s) 608, 1418, 1784
Zsp2I ATGCAT 1 cut(s) 1263
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.