RchiOBHm_Chr1g0365411

Domain of unknown function (DUF4378)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0006066
Physical Location & Seq
Reverse (-)
56292854 .. 56295186
2333 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2031 bp
ATGGAATCCACACGAGTTTCACCAAGTGTTATAGCAAAGTTAATGGGTCTTGCTGAATCGCCACAGCAGCAGCCTGTCCAAAAAAGACGAAGAGTACTGTCTGAGAATTACTTTCACAGAGTTGCTTCTATTGGCGTCAGAGAGAAATGTCATTCATTGAGGTCGGTAGTAGGCCATCAAGATTGTAAGGATGTCTTTGAAGTTGTAAGTCCACTAAAAGGGGATAATGACTTTAACCTGTCAGTTCATAAGGGAACAGAAAACTCGGGATTGTCAGAATTGAAGATGGAGACTAGGCAGGAGGAATTTCAAGTGTCATCAGAGAAGTATGAATGTCTACCAGGGGAAGTTGGTCTTGATGGCTTACATAAGTTTTTGAGGTCTCCATTGAAGTCAAATAGAAAAGGATGCTCCCCCAGTACTGGAGTTGTTGCTTTGAAACCCAAGCATGGTTTGGCCGACAGTTCTGCAAGATCCTTCCCTCCAATGAGTTCCCTTGAAGCTTATCAGTTAGTTGATGAGAAGTGCACCGAGTTTCCTAGTCCTAGCAATGGGAAGATACACGGTAAAGGAATAGAACCAATTGGAAAGGTATCAAGGCCAAGGTCCAGAGGTGGCAACTCCATTGCAATGGCATCTGAACTCCTGAGGTCTCCTTCCTTGAATTTATCTGATCGGAGGAACCAATACCAGTCTTTTTCTTATTCAGATGAATCATACGTAGCCAGGGAAGCCAAAGGGCAACTCTCAGAACAATGGAAGAAGACTGAGAAGTTTGAAGGGTGTGGAAGGGCTGACAGAGGCATTACCCTTGGCGATTCACTTGCCATGCCTGTCCATGAAATAGGGCCAAGAAACTTGAATTACAAGCTTGGTATGCATTTTCGACCAAGAAAAAAGCCTGTTAAGCATGATCTGAAGGACCTGGACCTCAGTAAGTTTAGAAAACATCAAGATAAATATGAAGCTCTCTGTAATGAGTGGCCTTTCACGCCTAAAAGGTCTGTCAATTGGGCGCAAAGCAGGTCATGTGAGTACAAGTTCAACCATAAGGATCGTTCGAGACCTATAAATTTGAGAACCAACAATAAGAAATTTCAATCTTTTCCTAGCCTGGAATCAGAAGGTAGTTTTACAGTAGAAAATACTTGCATGGTCCACAATGATCTGAAGAATGGAACTGAGGAGAAAGACAGTAAAACTACAGATACTTCAGTCCAAAAGGAAACATCCATGGAAGTTGATGAAGAAAGCAATTTTCCTTTGCACTGCTTCACCACATCAGATTGTATGGCAAGCTTGGAGGATGTTTACCAGCCTAGTCCAGTTTCAGTTCTGGAACCACCATTTAGAGGAGATAATTCACCTTCGCCGGAACGCTTGGGAAGTGTCAATGTTGACACCAGTGAATACTCCGATACATGCTCCGAAGGTTCTGGAATGATTGTGTCAAGTGATGATGATACTAGTGAAAGATCTGTGAAAGACTATAAGGAAAGCAGTTTAGTGGGGTTGTTCAATGTTGAAGAAAGTAGAGACTTTTCCTACCTCATTGATGTGTTATTGGAGGCAGGCTTTTATTGTCGGGGAGTAGAAATGGACTGTGATACCTGGTGCTTTCAAGAATGCCCAATGAGCCATTATGTCTTTGAGAGCCTGGAGAAGAAATTTGGTGATCAGTTGTCTTGGAATAGGTCAGACCGGAGGCTTTTGTTTGATCGTATAAATGATTGGCTAATAGAGATTCTCCAGCCATCTATGGGTGAACCCATATGGACCAAGCCTGTATCTAGAAGGATTAGAACCCAGTCTGGTCAGGAGATGATAGAGGAAAATCTGTGGATGTTGCTTGTTAATCAAGAGAAGGAAGGAATGGAAGCAAGAAAGAACTTGGAAGAGAAGCTGCTGAGAAGTGGAATTGGGAATTTAGATTTAGGAGATGAAATTGATTTTATTGGTAGAGAAGTAGAGAGATTGTTGATTGATGAGCTTGTCGAAGAGTTAGTTAGCAACTTAGCACAGAGAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4378 VARLMGL

Protein Analysis

676

Amino Acids

76.79

Weight (kDa)

5.66

Isoelectric Point (pI)

63.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 513 - 667 2.5e-26 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1014
AccI GTMKAC 1 cut(s) 337
AclWI GGATC 2 cut(s) 468, 1062
AcoI YGGCCR 1 cut(s) 456
AcsI RAATTY 6 cut(s) 305, 664, 1072, 1094, 1667, 1924
AcuI CTGAAG 3 cut(s) 938, 1190, 1197
AcyI GRCGYC 1 cut(s) 135
AdeI CACNNNGTG 1 cut(s) 26
AfaI GTAC 3 cut(s) 96, 421, 1037
AfiI CCNNNNNNNGG 6 cut(s) 218, 422, 449, 551, 1352, 1760
AhlI ACTAGT 1 cut(s) 1466
AjnI CCWGG 6 cut(s) 340, 725, 924, 1113, 1610, 1656
AluBI AGCT 6 cut(s) 503, 871, 968, 1299, 1903, 1990
AluI AGCT 6 cut(s) 503, 871, 968, 1299, 1903, 1990
Alw21I GWGCWC 1 cut(s) 530
Alw26I GTCTC 5 cut(s) 284, 387, 657, 1057, 1530
Alw44I GTGCAC 1 cut(s) 526
AlwI GGATC 2 cut(s) 468, 1062
Ama87I CYCGRG 1 cut(s) 265
AoxI GGCC 5 cut(s) 172, 456, 599, 848, 983
ApaLI GTGCAC 1 cut(s) 526
ApeKI GCWGC 3 cut(s) 67, 70, 1903
ApoI RAATTY 6 cut(s) 305, 664, 1072, 1094, 1667, 1924
AspLEI GCGC 1 cut(s) 1018
AspS9I GGNCC 6 cut(s) 606, 848, 922, 928, 1156, 1776
AsuHPI GGTGA 5 cut(s) 12, 1267, 1356, 1685, 1775
AvaI CYCGRG 1 cut(s) 265
AvaII GGWCC 5 cut(s) 606, 922, 928, 1156, 1776
AxyI CCTNAGG 1 cut(s) 647
BaeGI GKGCMC 1 cut(s) 530
BaeI ACNNNNGTAYC 2 cut(s) 1200, 1233
BauI CACGAG 1 cut(s) 12
BbsI GAAGAC 1 cut(s) 770
Bbv12I GWGCWC 1 cut(s) 530
BbvI GCAGC 3 cut(s) 79, 82, 1890
BccI CCATC 4 cut(s) 183, 280, 353, 1762
BcgI CGANNNNNNTGC 4 cut(s) 449, 483, 806, 840
BciT130I CCWGG 6 cut(s) 342, 727, 926, 1115, 1612, 1658
BclI TGATCA 1 cut(s) 1675
BcoDI GTCTC 5 cut(s) 284, 387, 657, 1057, 1530
BcuI ACTAGT 1 cut(s) 1466
BfaI CTAG 7 cut(s) 294, 540, 546, 1110, 1320, 1467, 1791
BfmI CTRYAG 1 cut(s) 1203
BfuAI ACCTGC 1 cut(s) 1014
BglII AGATCT 1 cut(s) 1475
BisI GCNGC 3 cut(s) 68, 71, 1904
BlsI GCNGC 3 cut(s) 69, 72, 1905
BmcAI AGTACT 2 cut(s) 96, 421
Bme1390I CCNGG 6 cut(s) 342, 727, 926, 1115, 1612, 1658
Bme18I GGWCC 5 cut(s) 606, 922, 928, 1156, 1776
BmeT110I CYCGRG 1 cut(s) 265
BmgT120I GGNCC 6 cut(s) 606, 848, 922, 928, 1156, 1776
BmiI GGNNCC 2 cut(s) 683, 1341
BmrFI CCNGG 6 cut(s) 342, 727, 926, 1115, 1612, 1658
BmrI ACTGGG 2 cut(s) 411, 1801
BmsI GCATC 2 cut(s) 398, 644
BmuI ACTGGG 2 cut(s) 411, 1801
BpiI GAAGAC 1 cut(s) 770
BpmI CTGGAG 3 cut(s) 444, 1679, 1733
BsaAI YACGTR 1 cut(s) 721
BsaHI GRCGYC 1 cut(s) 135
BsaI GGTCTC 3 cut(s) 387, 657, 1057
BsaJI CCNNGG 5 cut(s) 341, 602, 726, 811, 1233
BsaWI WCCGGW 1 cut(s) 1701
Bsc4I CCNNNNNNNGG 6 cut(s) 218, 422, 449, 551, 1352, 1760
Bse1I ACTGG 6 cut(s) 417, 427, 691, 1325, 1404, 1807
Bse21I CCTNAGG 1 cut(s) 647
Bse3DI GCAATG 3 cut(s) 556, 624, 636
BseBI CCWGG 6 cut(s) 342, 727, 926, 1115, 1612, 1658
BseDI CCNNGG 5 cut(s) 341, 602, 726, 811, 1233
BseGI GGATG 5 cut(s) 196, 413, 1229, 1312, 1848
BseLI CCNNNNNNNGG 6 cut(s) 218, 422, 449, 551, 1352, 1760
BseMI GCAATG 3 cut(s) 556, 624, 636
BseMII CTCAG 7 cut(s) 93, 638, 759, 762, 946, 1173, 1898
BseNI ACTGG 6 cut(s) 417, 427, 691, 1325, 1404, 1807
BseRI GAGGAG 2 cut(s) 1199, 1368
BseSI GKGCMC 1 cut(s) 530
BseXI GCAGC 3 cut(s) 79, 82, 1890
BshFI GGCC 5 cut(s) 174, 458, 601, 850, 985
BsiHKAI GWGCWC 1 cut(s) 530
BsiHKCI CYCGRG 1 cut(s) 265
BsiSI CCGG 2 cut(s) 1373, 1702
BslI CCNNNNNNNGG 6 cut(s) 218, 422, 449, 551, 1352, 1760
BsmAI GTCTC 5 cut(s) 284, 387, 657, 1057, 1530
BsmI GAATGC 1 cut(s) 1631
BsnI GGCC 5 cut(s) 174, 458, 601, 850, 985
Bso31I GGTCTC 3 cut(s) 387, 657, 1057
BsoBI CYCGRG 1 cut(s) 265
Bsp1286I GDGCHC 1 cut(s) 530
Bsp143I GATC 8 cut(s) 473, 673, 913, 1054, 1165, 1475, 1675, 1717
Bsp19I CCATGG 1 cut(s) 1233
BspANI GGCC 5 cut(s) 174, 458, 601, 850, 985
BspCNI CTCAG 7 cut(s) 94, 639, 760, 761, 945, 1174, 1899
BspLI GGNNCC 2 cut(s) 683, 1341
BspMI ACCTGC 1 cut(s) 1014
BspPI GGATC 2 cut(s) 468, 1062
BspTNI GGTCTC 3 cut(s) 387, 657, 1057
BsrDI GCAATG 3 cut(s) 556, 624, 636
BsrI ACTGG 6 cut(s) 417, 427, 691, 1325, 1404, 1807
BssECI CCNNGG 5 cut(s) 341, 602, 726, 811, 1233
BssMI GATC 8 cut(s) 473, 673, 913, 1054, 1165, 1475, 1675, 1717
BssNI GRCGYC 1 cut(s) 135
BssSI CACGAG 1 cut(s) 12
BssT1I CCWWGG 3 cut(s) 602, 811, 1233
Bst2BI CACGAG 1 cut(s) 12
Bst2UI CCWGG 6 cut(s) 342, 727, 926, 1115, 1612, 1658
Bst4CI ACNGT 6 cut(s) 99, 464, 566, 1138, 1196, 1604
Bst6I CTCTTC 3 cut(s) 85, 1890, 1992
BstACI GRCGYC 1 cut(s) 135
BstBAI YACGTR 1 cut(s) 721
BstC8I GCNNGC 2 cut(s) 1297, 1573
BstDEI CTNAG 8 cut(s) 102, 647, 748, 768, 932, 1182, 1907, 2014
BstDSI CCRYGG 1 cut(s) 1233
BstF5I GGATG 5 cut(s) 196, 413, 1229, 1312, 1848
BstHHI GCGC 1 cut(s) 1018
BstKTI GATC 8 cut(s) 476, 676, 916, 1057, 1168, 1478, 1678, 1720
BstMAI GTCTC 5 cut(s) 284, 387, 657, 1057, 1530
BstMBI GATC 8 cut(s) 473, 673, 913, 1054, 1165, 1475, 1675, 1717
BstMWI GCNNNNNNNGC 6 cut(s) 67, 731, 877, 907, 991, 1635
BstNI CCWGG 6 cut(s) 342, 727, 926, 1115, 1612, 1658
BstNSI RCATGY 1 cut(s) 1425
BstSCI CCNGG 6 cut(s) 340, 725, 924, 1113, 1610, 1656
BstSFI CTRYAG 1 cut(s) 1203
BstSLI GKGCMC 1 cut(s) 530
BstSNI TACGTA 1 cut(s) 721
BstV1I GCAGC 3 cut(s) 79, 82, 1890
BstV2I GAAGAC 1 cut(s) 770
BstX2I RGATCY 2 cut(s) 473, 1475
BstXI CCANNNNNNTGG 1 cut(s) 631
BstYI RGATCY 2 cut(s) 473, 1475
Bsu36I CCTNAGG 1 cut(s) 647
BsuRI GGCC 5 cut(s) 174, 458, 601, 850, 985
BtgI CCRYGG 1 cut(s) 1233
BtsCI GGATG 5 cut(s) 196, 413, 1229, 1312, 1848
BtsI GCAGTG 1 cut(s) 1267
BtsIMutI CAGTG 2 cut(s) 1267, 1411
BveI ACCTGC 1 cut(s) 1014
Cac8I GCNNGC 2 cut(s) 1297, 1573
CfoI GCGC 1 cut(s) 1018
Cfr13I GGNCC 6 cut(s) 606, 848, 922, 928, 1156, 1776
CseI GACGC 1 cut(s) 124
CsiI ACCWGGT 1 cut(s) 1610
Csp6I GTAC 3 cut(s) 95, 420, 1036
CviAII CATG 8 cut(s) 449, 829, 839, 911, 1029, 1153, 1234, 1422
CviQI GTAC 3 cut(s) 95, 420, 1036
DdeI CTNAG 8 cut(s) 102, 647, 748, 768, 932, 1182, 1907, 2014
DpnI GATC 8 cut(s) 475, 675, 915, 1056, 1167, 1477, 1677, 1719
DpnII GATC 8 cut(s) 473, 673, 913, 1054, 1165, 1475, 1675, 1717
DraIII CACNNNGTG 1 cut(s) 26
EaeI YGGCCR 1 cut(s) 456
Eam1104I CTCTTC 3 cut(s) 85, 1890, 1992
EarI CTCTTC 3 cut(s) 85, 1890, 1992
Eco105I TACGTA 1 cut(s) 721
Eco130I CCWWGG 3 cut(s) 602, 811, 1233
Eco31I GGTCTC 3 cut(s) 387, 657, 1057
Eco47I GGWCC 5 cut(s) 606, 922, 928, 1156, 1776
Eco57I CTGAAG 3 cut(s) 938, 1190, 1197
Eco81I CCTNAGG 1 cut(s) 647
Eco88I CYCGRG 1 cut(s) 265
EcoO109I RGGNCCY 1 cut(s) 922
EcoRII CCWGG 6 cut(s) 340, 725, 924, 1113, 1610, 1656
EcoT14I CCWWGG 3 cut(s) 602, 811, 1233
EcoT22I ATGCAT 1 cut(s) 882
ErhI CCWWGG 3 cut(s) 602, 811, 1233
FaeI CATG 8 cut(s) 452, 832, 842, 914, 1032, 1156, 1237, 1425
FalI AAGNNNNNCTT 4 cut(s) 179, 211, 339, 371
FatI CATG 8 cut(s) 448, 828, 838, 910, 1028, 1152, 1233, 1421
FauNDI CATATG 1 cut(s) 1772
FbaI TGATCA 1 cut(s) 1675
FblI GTMKAC 1 cut(s) 337
Fnu4HI GCNGC 3 cut(s) 68, 71, 1904
FokI GGATG 5 cut(s) 203, 420, 1216, 1319, 1855
Fsp4HI GCNGC 3 cut(s) 68, 71, 1904
FspBI CTAG 7 cut(s) 294, 540, 546, 1110, 1320, 1467, 1791
GlaI GCGC 1 cut(s) 1017
GluI GCNGC 3 cut(s) 68, 71, 1904
GsuI CTGGAG 3 cut(s) 444, 1679, 1733
HaeIII GGCC 5 cut(s) 174, 458, 601, 850, 985
HapII CCGG 2 cut(s) 1373, 1702
HgaI GACGC 1 cut(s) 124
HhaI GCGC 1 cut(s) 1018
Hin1I GRCGYC 1 cut(s) 135
Hin1II CATG 8 cut(s) 452, 832, 842, 914, 1032, 1156, 1237, 1425
Hin6I GCGC 1 cut(s) 1016
HinP1I GCGC 1 cut(s) 1016
HincII GTYRAC 1 cut(s) 1399
HindII GTYRAC 1 cut(s) 1399
HindIII AAGCTT 3 cut(s) 501, 869, 1297
HinfI GANTC 6 cut(s) 5, 56, 713, 818, 1118, 1744
HpaII CCGG 2 cut(s) 1373, 1702
HphI GGTGA 5 cut(s) 12, 1267, 1356, 1685, 1775
Hpy166II GTNNAC 7 cut(s) 212, 338, 528, 1159, 1312, 1399, 1766
Hpy8I GTNNAC 7 cut(s) 212, 338, 528, 1159, 1312, 1399, 1766
HpyCH4III ACNGT 6 cut(s) 99, 464, 566, 1138, 1196, 1604
HpyCH4IV ACGT 1 cut(s) 720
HpyCH4V TGCA 6 cut(s) 470, 528, 629, 880, 1152, 1267
HpyF10VI GCNNNNNNNGC 6 cut(s) 67, 731, 877, 907, 991, 1635
HpyF3I CTNAG 8 cut(s) 102, 647, 748, 768, 932, 1182, 1907, 2014
HpySE526I ACGT 1 cut(s) 720
Hsp92I GRCGYC 1 cut(s) 135
Hsp92II CATG 8 cut(s) 452, 832, 842, 914, 1032, 1156, 1237, 1425
HspAI GCGC 1 cut(s) 1016
Ksp22I TGATCA 1 cut(s) 1675
Kzo9I GATC 8 cut(s) 473, 673, 913, 1054, 1165, 1475, 1675, 1717
LmnI GCTCC 2 cut(s) 416, 1430
Lsp1109I GCAGC 3 cut(s) 79, 82, 1890
LweI GCATC 2 cut(s) 398, 644
MabI ACCWGGT 1 cut(s) 1610
MaeI CTAG 7 cut(s) 294, 540, 546, 1110, 1320, 1467, 1791
MaeII ACGT 1 cut(s) 720
MalI GATC 8 cut(s) 475, 675, 915, 1056, 1167, 1477, 1677, 1719
MboI GATC 8 cut(s) 473, 673, 913, 1054, 1165, 1475, 1675, 1717
MfeI CAATTG 2 cut(s) 582, 1009
MflI RGATCY 2 cut(s) 473, 1475
MhlI GDGCHC 1 cut(s) 530
Mph1103I ATGCAT 1 cut(s) 882
MseI TTAA 4 cut(s) 41, 234, 906, 1854
MslI CAYNNNNRTG 2 cut(s) 629, 1556
MspI CCGG 2 cut(s) 1373, 1702
MspR9I CCNGG 6 cut(s) 342, 727, 926, 1115, 1612, 1658
MunI CAATTG 2 cut(s) 582, 1009
Mva1269I GAATGC 1 cut(s) 1631
MvaI CCWGG 6 cut(s) 342, 727, 926, 1115, 1612, 1658
MwoI GCNNNNNNNGC 6 cut(s) 67, 731, 877, 907, 991, 1635
NcoI CCATGG 1 cut(s) 1233
NdeI CATATG 1 cut(s) 1772
NdeII GATC 8 cut(s) 473, 673, 913, 1054, 1165, 1475, 1675, 1717
NlaIII CATG 8 cut(s) 452, 832, 842, 914, 1032, 1156, 1237, 1425
NlaIV GGNNCC 2 cut(s) 683, 1341
NsiI ATGCAT 1 cut(s) 882
NspI RCATGY 1 cut(s) 1425
PctI GAATGC 1 cut(s) 1631
PfeI GAWTC 6 cut(s) 5, 56, 713, 818, 1118, 1744
PkrI GCNGC 3 cut(s) 69, 72, 1905
Ppu21I YACGTR 1 cut(s) 721
PpuMI RGGWCCY 1 cut(s) 922
Psp5II RGGWCCY 1 cut(s) 922
Psp6I CCWGG 6 cut(s) 340, 725, 924, 1113, 1610, 1656
PspGI CCWGG 6 cut(s) 340, 725, 924, 1113, 1610, 1656
PspN4I GGNNCC 2 cut(s) 683, 1341
PspPI GGNCC 6 cut(s) 606, 848, 922, 928, 1156, 1776
PspPPI RGGWCCY 1 cut(s) 922
PsuI RGATCY 2 cut(s) 473, 1475
RsaI GTAC 3 cut(s) 96, 421, 1037
RsaNI GTAC 3 cut(s) 95, 420, 1036
RseI CAYNNNNRTG 2 cut(s) 629, 1556
SaqAI TTAA 4 cut(s) 41, 234, 906, 1854
SatI GCNGC 3 cut(s) 68, 71, 1904
Sau3AI GATC 8 cut(s) 473, 673, 913, 1054, 1165, 1475, 1675, 1717
Sau96I GGNCC 6 cut(s) 606, 848, 922, 928, 1156, 1776
ScaI AGTACT 2 cut(s) 96, 421
ScrFI CCNGG 6 cut(s) 342, 727, 926, 1115, 1612, 1658
SduI GDGCHC 1 cut(s) 530
SexAI ACCWGGT 1 cut(s) 1610
SfaNI GCATC 2 cut(s) 398, 644
SfcI CTRYAG 1 cut(s) 1203
SinI GGWCC 5 cut(s) 606, 922, 928, 1156, 1776
SmiMI CAYNNNNRTG 2 cut(s) 629, 1556
SnaBI TACGTA 1 cut(s) 721
SpeI ACTAGT 1 cut(s) 1466
SspMI CTAG 7 cut(s) 294, 540, 546, 1110, 1320, 1467, 1791
StyD4I CCNGG 6 cut(s) 340, 725, 924, 1113, 1610, 1656
StyI CCWWGG 3 cut(s) 602, 811, 1233
TaaI ACNGT 6 cut(s) 99, 464, 566, 1138, 1196, 1604
TaiI ACGT 1 cut(s) 723
TaqI TCGA 3 cut(s) 886, 1061, 1995
TatI WGTACW 3 cut(s) 94, 419, 1035
TfiI GAWTC 6 cut(s) 5, 56, 713, 818, 1118, 1744
Tru1I TTAA 4 cut(s) 41, 234, 906, 1854
Tru9I TTAA 4 cut(s) 41, 234, 906, 1854
TscAI CASTG 2 cut(s) 1274, 1411
TseI GCWGC 3 cut(s) 67, 70, 1903
TspDTI ATGAA 8 cut(s) 144, 236, 345, 726, 855, 978, 1260, 1956
TspRI CASTG 2 cut(s) 1274, 1411
VneI GTGCAC 1 cut(s) 526
VpaK11BI GGWCC 5 cut(s) 606, 922, 928, 1156, 1776
XapI RAATTY 6 cut(s) 305, 664, 1072, 1094, 1667, 1924
XbaI TCTAGA 1 cut(s) 1790
XceI RCATGY 1 cut(s) 1425
XcmI CCANNNNNNNNNTGG 1 cut(s) 451
XmiI GTMKAC 1 cut(s) 337
XspI CTAG 7 cut(s) 294, 540, 546, 1110, 1320, 1467, 1791
ZrmI AGTACT 2 cut(s) 96, 421
Zsp2I ATGCAT 1 cut(s) 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.