Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009148

Physical Location & Seq

Genomic Coordinates Reverse (-)

66907558 .. 66912484

Gene Structure 4927 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGGAGAGGTCTAGATCGAAGAGATCGTACTACTATGAACAGCAGCAACACCAGGACTATGATACGGAGACCGTCGGCCGGACGAGGCCGAGGTACAACCACCACTACGCCAACTGCAACAACAGCCACCGCCACCGCGGAAGCGGCGGCGGAGGAGGTAGGGCGGCGAAGGCGCAGCAGCAGCAGCAGCAGGAGACGGCGTCGGTGACGGTGACGACGACGTATCGGATACTGTGCCACGATATGAAGGCCGGAGGGGTGATTGGGAAGTCCGGCAGCATTATCAAGTCGATCCGGCAGCACACCGGCGCGTGGATCAACGTGCACGAGCTGGTTCCCGGAGACGAGGAGCGGATTATCGAGATTTCGGACACGCGGCGGCGGGACCCGGAGGGAAGGATCCCGGCGTTCTCTCCGGCGCAGGAGGCTCTGTTTCTGATCCACGAGCGGATTCTGGAGAGTGAGGTCGGCGGCGCCGATGAGGAGGATGAGTACGGCGGCGGCGGCGGTGGAGGTGGTAGAGGAGGTGGTGGTGGGACACGTGTCGCGACGAGGCTTGTGGTGTCGAGAATGCATGTGGGGAGTTTGCTGGGGAAAGGAGGGAAGATAATAGAGCAAATGAGGATGGAGACAAAGACCCAGATTAGGGTTTTGCCAAGGGATCATAATCTGCCTCGCTGTGTTTCAATGTCTGAGGAGATTGTTCAGGTAGTAGGCGATCCGAATAATGTAAAGTCTGCTGTGGAAATTATTTCATCTCGCTTGAGGGAGAGTCAGCACCGTGACCGCAATAATTTCCATGGACGAGCACATTCACCAGAACGGTTCTTTCCTCCTGATGATGATTATATTCCTCATATGAACAATGCAGGACGTAAGTCATCCATGGATGGGGCTGGTTTTGGATCAAGATTATCTGGCCCCAATACGAGGAACAACAACTATGGCTCCCGTTCATCTGGTTATATGATGGAACCAGGGTCTGCTCCAATGGATGATAATGTACAGCCCTTTTACGGAGAAGACCTTGTGTTTCGAATGCTTTGCCCAATTGATAAAGTTGATCTTGTAGTTGGAGAGTCTGATGGAATTATAGAATTGCTTCAAAATGAAATTGGTGTGGATGTCAGGGCTACTGACCGTGTGGCCGGAGCAGATGAACAGATAATCATCATTTCTTCTGAGGAGGGTCCTGATGATGAGCTGTTTCCAGCTCAGGAAGCTTTGCTGCACATCCAAACTCGCATTGTCGATCTTATACCAGACAGAGACAACATTATAACTACTAGGTTGCTTGTTTCGTCAAGTGATATTGGATGCTTAGAGGGAAGAGATGGGTCTTTATCAGACATGAGGCGACTTACTGGCGCAAATATACAAATTCTGCCCAGAGAAGAACTTCCTCTTTGTGTATCAGGGAATGATATGCTTTTACAGATAGTAGGGGAAATAAAAGCAGCTCGAGATGCTCTAGTTGAGGTGACATCAAGACTAAGGAGTCACTTATACAGGGAGTTGTTTCAAAAGGATACCATGCCACTTTCTGCGCCTGGCCCTGCAAGCAGTGCTCTAGATTACATAAATCCTGTTCGTGAAGCTCGTACCGGAAATGGTCCTTCTATAGTTACCTATCAGAATGTGCAAACTGCACAGCCATCAAAGGACTCTGGAGTGGTTGTTAGTGAAGCAGTAAAGCAGAATGAAAGTGAACGACGTGAAGATGTTCCGACTGGGATGAATAGAATACCTGTGACACTTGTCACTCGGAGTATACTTGAAGTTGTCATACCCGAGAAGGCTGTTTCAAAGCTCATAACAAAATCGAAAAACATGCTTGCTCAAATTAGCGAGTTATCAGGAGCCAGGGTAACCCTGGTAGATGAGAGTCCAGAGGTAACCCAAAAGATCATTCAAATTTCAGGTACTCCAGAGCAGACTGAGAGGGCTCAGAGCTTGCTCCAGGGTTTTATTTTAAGCACACAAGAAGACGACCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002831 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009266 GO:0009408 GO:0009628 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009892 GO:0009987 GO:0010033 GO:0010286 GO:0010445 GO:0010467 GO:0010468 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016441 GO:0016458 GO:0016604 GO:0019222 GO:0023052 GO:0031047 GO:0031050 GO:0031053 GO:0031347 GO:0031974 GO:0031981 GO:0032101 GO:0032870 GO:0034470 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043331 GO:0043900 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048519 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070878 GO:0070887 GO:0070918 GO:0071229 GO:0071310 GO:0071359 GO:0071395 GO:0071407 GO:0071495 GO:0071704 GO:0080134 GO:0090304 GO:0097159 GO:1900150 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_1

Protein Analysis

665

Amino Acids

73.17

Weight (kDa)

5.63

Isoelectric Point (pI)

52.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	74 - 123	1.4e-10	KH domain
KH_1	PF00013	185 - 252	4.2e-12	KH domain
KH_1	PF00013	592 - 654	4.5e-10	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009148)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53060 AT5G53060 AT5G53060
fragaria_vesca	FvH4_7g32010 FvH4_7g32010
malus_domestica	MD01G1222900.v1.1 MD07G1293700.v1.1
prunus_persica	Prupe.2G313500_v2.0.a1
pyrus_communis	pycom01g23230 pycom07g26650
rosa_chinensis	RchiOBHm_Chr1g0381621
rosa_laevigata	RLG00000026220
rosa_multiflora	Rmu_sc0003688.1_g000012 Rmu_sc0005891.1_g000007
rosa_roxburghii	Rroxscaffold_4G00278580
rosa_rugosa	Rorug01G0429700
rosa_samantha	Rh1AG453000 Rh1BG410000 Rh1CG424600 Rh1DG441800 Rh2CG399100
rosa_wichuraiana	Rw1G039520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1280
AasI	GACNNNNNNGTC	1 cut(s)	1497
AccB1I	GGYRCC	1 cut(s)	473
AccBSI	CCGCTC	2 cut(s)	352, 448
AccI	GTMKAC	1 cut(s)	1771
AccII	CGCG	4 cut(s)	138, 311, 376, 548
AclWI	GGATC	8 cut(s)	286, 323, 394, 407, 433, 669, 713, 913
AcoI	YGGCCR	2 cut(s)	76, 1146
AcsI	RAATTY	2 cut(s)	1380, 1914
AcvI	CACGTG	1 cut(s)	542
AcyI	GRCGYC	2 cut(s)	200, 474
AfaI	GTAC	6 cut(s)	29, 95, 494, 1005, 1603, 1924
AfiI	CCNNNNNNNGG	7 cut(s)	78, 312, 645, 646, 891, 930, 1016
AflIII	ACRYGT	2 cut(s)	539, 541
AgsI	TTSAA	6 cut(s)	687, 1106, 1523, 1778, 1806, 1913
AjiI	CACGTC	1 cut(s)	1715
AjnI	CCWGG	6 cut(s)	51, 976, 1549, 1862, 1872, 1959
AjuI	GAANNNNNNNTTGG	2 cut(s)	1893, 1925
AluBI	AGCT	8 cut(s)	331, 1204, 1214, 1223, 1460, 1598, 1810, 1953
AluI	AGCT	8 cut(s)	331, 1204, 1214, 1223, 1460, 1598, 1810, 1953
Alw21I	GWGCWC	3 cut(s)	327, 811, 1570
Alw26I	GTCTC	5 cut(s)	62, 188, 336, 623, 1263
Alw44I	GTGCAC	1 cut(s)	323
AlwI	GGATC	8 cut(s)	286, 323, 394, 407, 433, 669, 713, 913
AlwNI	CAGNNNCTG	1 cut(s)	983
Ama87I	CYCGRG	2 cut(s)	1461, 1790
AoxI	GGCC	6 cut(s)	76, 86, 249, 919, 1146, 1552
ApaLI	GTGCAC	1 cut(s)	323
ApoI	RAATTY	2 cut(s)	1380, 1914
Asp700I	GAANNNNTTC	3 cut(s)	1101, 1398, 1722
AspLEI	GCGC	6 cut(s)	175, 311, 421, 476, 1370, 1549
AspS9I	GGNCC	5 cut(s)	385, 920, 1190, 1553, 1613
AsuC2I	CCSGG	3 cut(s)	339, 389, 404
AsuHPI	GGTGA	5 cut(s)	217, 223, 271, 807, 1492
AsuII	TTCGAA	1 cut(s)	1036
AvaI	CYCGRG	2 cut(s)	1461, 1790
AvaII	GGWCC	3 cut(s)	385, 1190, 1613
BaeGI	GKGCMC	1 cut(s)	327
BamHI	GGATCC	1 cut(s)	399
BanI	GGYRCC	1 cut(s)	473
BanII	GRGCYC	1 cut(s)	1948
BarI	GAAGNNNNNNTAC	4 cut(s)	11, 43, 1770, 1802
BauI	CACGAG	2 cut(s)	326, 443
BbrPI	CACGTG	1 cut(s)	542
BbsI	GAAGAC	2 cut(s)	1029, 1992
Bbv12I	GWGCWC	3 cut(s)	327, 811, 1570
BccI	CCATC	6 cut(s)	619, 884, 964, 1079, 1328, 1663
BceAI	ACGGC	2 cut(s)	213, 511
BcgI	CGANNNNNNTGC	4 cut(s)	1026, 1060, 1813, 1847
BciT130I	CCWGG	6 cut(s)	53, 978, 1551, 1864, 1874, 1961
BciVI	GTATCC	2 cut(s)	222, 1522
BcnI	CCSGG	3 cut(s)	339, 389, 404
BcoDI	GTCTC	5 cut(s)	62, 188, 336, 623, 1263
BfaI	CTAG	4 cut(s)	12, 1287, 1472, 1571
BfmI	CTRYAG	1 cut(s)	1620
BfoI	RGCGCY	1 cut(s)	477
BfuI	GTATCC	2 cut(s)	222, 1522
Bme1390I	CCNGG	9 cut(s)	53, 339, 389, 404, 978, 1551, 1864, 1874, 1961
Bme18I	GGWCC	3 cut(s)	385, 1190, 1613
BmeT110I	CYCGRG	2 cut(s)	1461, 1790
BmgBI	CACGTC	1 cut(s)	1715
BmgT120I	GGNCC	5 cut(s)	385, 920, 1190, 1553, 1613
BmrFI	CCNGG	9 cut(s)	53, 339, 389, 404, 978, 1551, 1864, 1874, 1961
BmrI	ACTGGG	1 cut(s)	1740
BmsI	GCATC	2 cut(s)	1307, 1456
BmuI	ACTGGG	1 cut(s)	1740
BoxI	GACNNNNGTC	3 cut(s)	542, 877, 1757
BpiI	GAAGAC	2 cut(s)	1029, 1992
BpmI	CTGGAG	4 cut(s)	476, 1689, 1911, 1943
Bpu10I	CCTNAGC	1 cut(s)	1215
Bpu14I	TTCGAA	1 cut(s)	1036
BpuEI	CTTGAG	1 cut(s)	784
BpuMI	CCSGG	3 cut(s)	339, 389, 404
BsaAI	YACGTR	1 cut(s)	542
BsaBI	GATNNNNATC	2 cut(s)	666, 1169
BsaHI	GRCGYC	2 cut(s)	200, 474
BsaI	GGTCTC	1 cut(s)	62
BsaJI	CCNNGG	9 cut(s)	89, 136, 656, 799, 885, 977, 1863, 1872, 1960
BsaWI	WCCGGW	1 cut(s)	1604
Bsc4I	CCNNNNNNNGG	7 cut(s)	78, 312, 645, 646, 891, 930, 1016
Bse118I	RCCGGY	1 cut(s)	305
Bse1I	ACTGG	2 cut(s)	1369, 1735
Bse8I	GATNNNNATC	2 cut(s)	666, 1169
BseBI	CCWGG	6 cut(s)	53, 978, 1551, 1864, 1874, 1961
BseDI	CCNNGG	9 cut(s)	89, 136, 656, 799, 885, 977, 1863, 1872, 1960
BseGI	GGATG	9 cut(s)	493, 630, 881, 895, 1000, 1129, 1233, 1322, 1740
BseJI	GATNNNNATC	2 cut(s)	666, 1169
BseLI	CCNNNNNNNGG	7 cut(s)	78, 312, 645, 646, 891, 930, 1016
BseMII	CTCAG	5 cut(s)	684, 1173, 1229, 1929, 1961
BseNI	ACTGG	2 cut(s)	1369, 1735
BseRI	GAGGAG	6 cut(s)	168, 362, 497, 537, 710, 1199
BseSI	GKGCMC	1 cut(s)	327
BseX3I	CGGCCG	1 cut(s)	76
BseYI	CCCAGC	1 cut(s)	589
BsgI	GTGCAG	2 cut(s)	1214, 1632
Bsh1236I	CGCG	4 cut(s)	138, 311, 376, 548
Bsh1285I	CGRYCG	1 cut(s)	79
BshFI	GGCC	6 cut(s)	78, 88, 251, 921, 1148, 1554
BshNI	GGYRCC	1 cut(s)	473
BsiEI	CGRYCG	1 cut(s)	79
BsiHKAI	GWGCWC	3 cut(s)	327, 811, 1570
BsiHKCI	CYCGRG	2 cut(s)	1461, 1790
BslFI	GGGAC	2 cut(s)	398, 550
BslI	CCNNNNNNNGG	7 cut(s)	78, 312, 645, 646, 891, 930, 1016
BsmAI	GTCTC	5 cut(s)	62, 188, 336, 623, 1263
BsmBI	CGTCTC	2 cut(s)	188, 336
BsmFI	GGGAC	2 cut(s)	398, 550
BsmI	GAATGC	2 cut(s)	576, 1044
BsnI	GGCC	6 cut(s)	78, 88, 251, 921, 1148, 1554
Bso31I	GGTCTC	1 cut(s)	62
BsoBI	CYCGRG	2 cut(s)	1461, 1790
Bsp119I	TTCGAA	1 cut(s)	1036
Bsp1286I	GDGCHC	4 cut(s)	327, 811, 1570, 1948
Bsp1407I	TGTACA	1 cut(s)	1003
Bsp19I	CCATGG	2 cut(s)	799, 885
Bsp68I	TCGCGA	1 cut(s)	548
BspANI	GGCC	6 cut(s)	78, 88, 251, 921, 1148, 1554
BspCNI	CTCAG	5 cut(s)	685, 1174, 1228, 1930, 1960
BspFNI	CGCG	4 cut(s)	138, 311, 376, 548
BspPI	GGATC	8 cut(s)	286, 323, 394, 407, 433, 669, 713, 913
BspT104I	TTCGAA	1 cut(s)	1036
BspT107I	GGYRCC	1 cut(s)	473
BspTNI	GGTCTC	1 cut(s)	62
BsrBI	CCGCTC	2 cut(s)	352, 448
BsrFI	RCCGGY	1 cut(s)	305
BsrGI	TGTACA	1 cut(s)	1003
BsrI	ACTGG	2 cut(s)	1369, 1735
BssAI	RCCGGY	1 cut(s)	305
BssECI	CCNNGG	9 cut(s)	89, 136, 656, 799, 885, 977, 1863, 1872, 1960
BssNAI	GTATAC	1 cut(s)	1772
BssNI	GRCGYC	2 cut(s)	200, 474
BssSI	CACGAG	2 cut(s)	326, 443
BssT1I	CCWWGG	3 cut(s)	656, 799, 885
Bst1107I	GTATAC	1 cut(s)	1772
Bst2BI	CACGAG	2 cut(s)	326, 443
Bst2UI	CCWGG	6 cut(s)	53, 978, 1551, 1864, 1874, 1961
Bst4CI	ACNGT	6 cut(s)	73, 211, 234, 782, 825, 1142
Bst6I	CTCTTC	2 cut(s)	14, 1324
BstACI	GRCGYC	2 cut(s)	200, 474
BstAPI	GCANNNNNTGC	1 cut(s)	1565
BstAUI	TGTACA	1 cut(s)	1003
BstBAI	YACGTR	1 cut(s)	542
BstBI	TTCGAA	1 cut(s)	1036
BstC8I	GCNNGC	3 cut(s)	1561, 1836, 1955
BstDEI	CTNAG	7 cut(s)	693, 1182, 1215, 1321, 1493, 1938, 1947
BstDSI	CCRYGG	3 cut(s)	136, 799, 885
BstEII	GGTNACC	2 cut(s)	1867, 1894
BstF5I	GGATG	9 cut(s)	493, 630, 881, 895, 1000, 1129, 1233, 1322, 1740
BstFNI	CGCG	4 cut(s)	138, 311, 376, 548
BstH2I	RGCGCY	1 cut(s)	477
BstHHI	GCGC	6 cut(s)	175, 311, 421, 476, 1370, 1549
BstMAI	GTCTC	5 cut(s)	62, 188, 336, 623, 1263
BstMCI	CGRYCG	1 cut(s)	79
BstNI	CCWGG	6 cut(s)	53, 978, 1551, 1864, 1874, 1961
BstNSI	RCATGY	2 cut(s)	578, 1834
BstPAI	GACNNNNGTC	3 cut(s)	542, 877, 1757
BstPI	GGTNACC	2 cut(s)	1867, 1894
BstSCI	CCNGG	9 cut(s)	51, 337, 387, 402, 976, 1549, 1862, 1872, 1959
BstSFI	CTRYAG	1 cut(s)	1620
BstSLI	GKGCMC	1 cut(s)	327
BstUI	CGCG	4 cut(s)	138, 311, 376, 548
BstV2I	GAAGAC	2 cut(s)	1029, 1992
BstX2I	RGATCY	1 cut(s)	399
BstYI	RGATCY	1 cut(s)	399
BstZ17I	GTATAC	1 cut(s)	1772
BstZI	CGGCCG	1 cut(s)	76
BsuI	GTATCC	2 cut(s)	222, 1522
BsuRI	GGCC	6 cut(s)	78, 88, 251, 921, 1148, 1554
BtgI	CCRYGG	3 cut(s)	136, 799, 885
BtrI	CACGTC	1 cut(s)	1715
BtsCI	GGATG	9 cut(s)	493, 630, 881, 895, 1000, 1129, 1233, 1322, 1740
BtsI	GCAGTG	1 cut(s)	1570
BtsIMutI	CAGTG	1 cut(s)	1570
BtuMI	TCGCGA	1 cut(s)	548
Cac8I	GCNNGC	3 cut(s)	1561, 1836, 1955
CaiI	CAGNNNCTG	1 cut(s)	983
CfoI	GCGC	6 cut(s)	175, 311, 421, 476, 1370, 1549
Cfr10I	RCCGGY	1 cut(s)	305
Cfr13I	GGNCC	5 cut(s)	385, 920, 1190, 1553, 1613
Cfr42I	CCGCGG	1 cut(s)	139
CseI	GACGC	1 cut(s)	189
Csp6I	GTAC	6 cut(s)	28, 94, 493, 1004, 1602, 1923
CviAII	CATG	6 cut(s)	575, 800, 886, 1351, 1534, 1831
CviQI	GTAC	6 cut(s)	28, 94, 493, 1004, 1602, 1923
DdeI	CTNAG	7 cut(s)	693, 1182, 1215, 1321, 1493, 1938, 1947
DinI	GGCGCC	1 cut(s)	475
DrdI	GACNNNNNNGTC	1 cut(s)	1497
DseDI	GACNNNNNNGTC	1 cut(s)	1497
EaeI	YGGCCR	2 cut(s)	76, 1146
EagI	CGGCCG	1 cut(s)	76
Eam1104I	CTCTTC	2 cut(s)	14, 1324
EarI	CTCTTC	2 cut(s)	14, 1324
EciI	GGCGGA	1 cut(s)	165
EclXI	CGGCCG	1 cut(s)	76
Eco130I	CCWWGG	3 cut(s)	656, 799, 885
Eco24I	GRGCYC	1 cut(s)	1948
Eco31I	GGTCTC	1 cut(s)	62
Eco47I	GGWCC	3 cut(s)	385, 1190, 1613
Eco52I	CGGCCG	1 cut(s)	76
Eco72I	CACGTG	1 cut(s)	542
Eco88I	CYCGRG	2 cut(s)	1461, 1790
Eco91I	GGTNACC	2 cut(s)	1867, 1894
EcoO109I	RGGNCCY	2 cut(s)	385, 1190
EcoO65I	GGTNACC	2 cut(s)	1867, 1894
EcoRII	CCWGG	6 cut(s)	51, 976, 1549, 1862, 1872, 1959
EcoT14I	CCWWGG	3 cut(s)	656, 799, 885
EcoT22I	ATGCAT	1 cut(s)	576
EcoT38I	GRGCYC	1 cut(s)	1948
EgeI	GGCGCC	1 cut(s)	475
EheI	GGCGCC	1 cut(s)	475
ErhI	CCWWGG	3 cut(s)	656, 799, 885
Esp3I	CGTCTC	2 cut(s)	188, 336
FaeI	CATG	6 cut(s)	578, 803, 889, 1354, 1537, 1834
FalI	AAGNNNNNCTT	2 cut(s)	1050, 1082
FaqI	GGGAC	2 cut(s)	398, 550
FatI	CATG	6 cut(s)	574, 799, 885, 1350, 1533, 1830
FauI	CCCGC	1 cut(s)	375
FauNDI	CATATG	1 cut(s)	858
FblI	GTMKAC	1 cut(s)	1771
FokI	GGATG	9 cut(s)	500, 637, 868, 902, 1007, 1136, 1220, 1329, 1747
FriOI	GRGCYC	1 cut(s)	1948
FspBI	CTAG	4 cut(s)	12, 1287, 1472, 1571
GlaI	GCGC	6 cut(s)	174, 310, 420, 475, 1369, 1548
GsaI	CCCAGC	1 cut(s)	593
GsuI	CTGGAG	4 cut(s)	476, 1689, 1911, 1943
HaeII	RGCGCY	1 cut(s)	477
HaeIII	GGCC	6 cut(s)	78, 88, 251, 921, 1148, 1554
HgaI	GACGC	1 cut(s)	189
HhaI	GCGC	6 cut(s)	175, 311, 421, 476, 1370, 1549
Hin1I	GRCGYC	2 cut(s)	200, 474
Hin1II	CATG	6 cut(s)	578, 803, 889, 1354, 1537, 1834
Hin6I	GCGC	6 cut(s)	173, 309, 419, 474, 1368, 1547
HinP1I	GCGC	6 cut(s)	173, 309, 419, 474, 1368, 1547
HindIII	AAGCTT	1 cut(s)	1221
HinfI	GANTC	6 cut(s)	451, 772, 1079, 1498, 1664, 1885
HphI	GGTGA	5 cut(s)	217, 223, 271, 807, 1492
Hpy166II	GTNNAC	3 cut(s)	325, 1709, 1772
Hpy8I	GTNNAC	3 cut(s)	325, 1709, 1772
Hpy99I	CGWCG	6 cut(s)	77, 205, 220, 223, 553, 1716
HpyAV	CCTTC	5 cut(s)	163, 241, 390, 1626, 1789
HpyCH4III	ACNGT	6 cut(s)	73, 211, 234, 782, 825, 1142
HpyCH4IV	ACGT	5 cut(s)	221, 321, 541, 874, 1714
HpyCH4V	TGCA	8 cut(s)	117, 325, 574, 869, 1231, 1559, 1642, 1649
HpyF3I	CTNAG	7 cut(s)	693, 1182, 1215, 1321, 1493, 1938, 1947
HpySE526I	ACGT	5 cut(s)	221, 321, 541, 874, 1714
Hsp92I	GRCGYC	2 cut(s)	200, 474
Hsp92II	CATG	6 cut(s)	578, 803, 889, 1354, 1537, 1834
HspAI	GCGC	6 cut(s)	173, 309, 419, 474, 1368, 1547
KasI	GGCGCC	1 cut(s)	473
KflI	GGGWCCC	1 cut(s)	385
KspI	CCGCGG	1 cut(s)	139
LmnI	GCTCC	6 cut(s)	349, 953, 991, 1151, 1859, 1962
LweI	GCATC	2 cut(s)	1307, 1456
MaeI	CTAG	4 cut(s)	12, 1287, 1472, 1571
MaeII	ACGT	5 cut(s)	221, 321, 541, 874, 1714
MbiI	CCGCTC	2 cut(s)	352, 448
MboII	GAAGA	8 cut(s)	31, 616, 1034, 1170, 1341, 1406, 1730, 1997
MfeI	CAATTG	1 cut(s)	1050
MflI	RGATCY	1 cut(s)	399
MhlI	GDGCHC	4 cut(s)	327, 811, 1570, 1948
MluCI	AATT	9 cut(s)	747, 793, 1050, 1089, 1097, 1113, 1380, 1842, 1914
Mly113I	GGCGCC	1 cut(s)	474
MlyI	GAGTC	5 cut(s)	781, 1088, 1507, 1658, 1894
MmeI	TCCRAC	2 cut(s)	1054, 1751
Mph1103I	ATGCAT	1 cut(s)	576
MroXI	GAANNNNTTC	3 cut(s)	1101, 1398, 1722
MseI	TTAA	1 cut(s)	1973
MspA1I	CMGCKG	1 cut(s)	138
MspR9I	CCNGG	9 cut(s)	53, 339, 389, 404, 978, 1551, 1864, 1874, 1961
MunI	CAATTG	1 cut(s)	1050
Mva1269I	GAATGC	2 cut(s)	576, 1044
MvaI	CCWGG	6 cut(s)	53, 978, 1551, 1864, 1874, 1961
MvnI	CGCG	4 cut(s)	138, 311, 376, 548
NarI	GGCGCC	1 cut(s)	474
NciI	CCSGG	3 cut(s)	339, 389, 404
NcoI	CCATGG	2 cut(s)	799, 885
NdeI	CATATG	1 cut(s)	858
NlaIII	CATG	6 cut(s)	578, 803, 889, 1354, 1537, 1834
NmeAIII	GCCGAG	1 cut(s)	114
NmuCI	GTSAC	7 cut(s)	205, 211, 782, 1480, 1499, 1750, 1759
NruI	TCGCGA	1 cut(s)	548
NsiI	ATGCAT	1 cut(s)	576
NspI	RCATGY	2 cut(s)	578, 1834
NspV	TTCGAA	1 cut(s)	1036
PaeR7I	CTCGAG	1 cut(s)	1461
PcsI	WCGNNNNNNNCGW	4 cut(s)	23, 215, 474, 1597
PctI	GAATGC	2 cut(s)	576, 1044
PdmI	GAANNNNTTC	3 cut(s)	1101, 1398, 1722
PfeI	GAWTC	1 cut(s)	451
PflFI	GACNNNGTC	1 cut(s)	199
PfoI	TCCNGGA	1 cut(s)	337
PleI	GAGTC	5 cut(s)	780, 1087, 1506, 1658, 1893
PluTI	GGCGCC	1 cut(s)	477
PmaCI	CACGTG	1 cut(s)	542
PmlI	CACGTG	1 cut(s)	542
PpsI	GAGTC	5 cut(s)	780, 1087, 1506, 1658, 1893
Ppu21I	YACGTR	1 cut(s)	542
PpuMI	RGGWCCY	2 cut(s)	385, 1190
PshAI	GACNNNNGTC	3 cut(s)	542, 877, 1757
PsiI	TTATAA	1 cut(s)	1280
Psp5II	RGGWCCY	2 cut(s)	385, 1190
Psp6I	CCWGG	6 cut(s)	51, 976, 1549, 1862, 1872, 1959
PspCI	CACGTG	1 cut(s)	542
PspEI	GGTNACC	2 cut(s)	1867, 1894
PspFI	CCCAGC	1 cut(s)	589
PspGI	CCWGG	6 cut(s)	51, 976, 1549, 1862, 1872, 1959
PspPI	GGNCC	5 cut(s)	385, 920, 1190, 1553, 1613
PspPPI	RGGWCCY	2 cut(s)	385, 1190
PstNI	CAGNNNCTG	1 cut(s)	983
PsuI	RGATCY	1 cut(s)	399
PsyI	GACNNNGTC	1 cut(s)	199
RruI	TCGCGA	1 cut(s)	548
RsaI	GTAC	6 cut(s)	29, 95, 494, 1005, 1603, 1924
RsaNI	GTAC	6 cut(s)	28, 94, 493, 1004, 1602, 1923
SacII	CCGCGG	1 cut(s)	139
SaqAI	TTAA	1 cut(s)	1973
Sau96I	GGNCC	5 cut(s)	385, 920, 1190, 1553, 1613
SchI	GAGTC	5 cut(s)	781, 1088, 1507, 1658, 1894
ScrFI	CCNGG	9 cut(s)	53, 339, 389, 404, 978, 1551, 1864, 1874, 1961
SduI	GDGCHC	4 cut(s)	327, 811, 1570, 1948
SfaNI	GCATC	2 cut(s)	1307, 1456
SfcI	CTRYAG	1 cut(s)	1620
SfoI	GGCGCC	1 cut(s)	475
Sfr274I	CTCGAG	1 cut(s)	1461
Sfr303I	CCGCGG	1 cut(s)	139
SfuI	TTCGAA	1 cut(s)	1036
SgrAI	CRCCGGYG	1 cut(s)	305
SgrBI	CCGCGG	1 cut(s)	139
SinI	GGWCC	3 cut(s)	385, 1190, 1613
SlaI	CTCGAG	1 cut(s)	1461
SmlI	CTYRAG	2 cut(s)	763, 1461
SmoI	CTYRAG	2 cut(s)	763, 1461
Sse9I	AATT	9 cut(s)	747, 793, 1050, 1089, 1097, 1113, 1380, 1842, 1914
SspDI	GGCGCC	1 cut(s)	473
SspMI	CTAG	4 cut(s)	12, 1287, 1472, 1571
StyD4I	CCNGG	9 cut(s)	51, 337, 387, 402, 976, 1549, 1862, 1872, 1959
StyI	CCWWGG	3 cut(s)	656, 799, 885
TaaI	ACNGT	6 cut(s)	73, 211, 234, 782, 825, 1142
TaiI	ACGT	5 cut(s)	224, 324, 544, 877, 1717
TaqI	TCGA	8 cut(s)	17, 290, 360, 566, 1036, 1251, 1462, 1823
TasI	AATT	9 cut(s)	747, 793, 1050, 1089, 1097, 1113, 1380, 1842, 1914
TatI	WGTACW	1 cut(s)	1003
TauI	GCSGC	9 cut(s)	147, 150, 167, 379, 382, 474, 501, 504, 507
TfiI	GAWTC	1 cut(s)	451
Tru1I	TTAA	1 cut(s)	1973
Tru9I	TTAA	1 cut(s)	1973
TscAI	CASTG	1 cut(s)	1570
TseFI	GTSAC	7 cut(s)	205, 211, 782, 1480, 1499, 1750, 1759
Tsp45I	GTSAC	7 cut(s)	205, 211, 782, 1480, 1499, 1750, 1759
TspDTI	ATGAA	9 cut(s)	51, 260, 744, 875, 945, 1125, 1173, 1716, 1751
TspGWI	ACGGA	2 cut(s)	80, 1032
TspRI	CASTG	1 cut(s)	1570
Tth111I	GACNNNGTC	1 cut(s)	199
VneI	GTGCAC	1 cut(s)	323
VpaK11BI	GGWCC	3 cut(s)	385, 1190, 1613
XapI	RAATTY	2 cut(s)	1380, 1914
XbaI	TCTAGA	2 cut(s)	11, 1570
XceI	RCATGY	2 cut(s)	578, 1834
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1870
XhoI	CTCGAG	1 cut(s)	1461
XmiI	GTMKAC	1 cut(s)	1771
XmnI	GAANNNNTTC	3 cut(s)	1101, 1398, 1722
XspI	CTAG	4 cut(s)	12, 1287, 1472, 1571
Zsp2I	ATGCAT	1 cut(s)	576

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.