RchiOBHm_Chr1g0328921

Acetyltransferase NSI-like

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
18391272 .. 18394336
3065 bp
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UTR
Exon/CDS
Intron
PRQ55827

Sequence Viewer

Length: 240 bp
ATGTGCCATTGTTTTGGTTGCCTGTTTCTGACGAGGTGCCCTATTGCTTCATTTGATTTGGATCGTCAAGTATCGCATAAGTTATTGTTTCCTTGGAATTTAAGCCACAGCCTTATTAAAGGAAGCAGAATTCATAAGACATATCGTCTCAAAGCTGGCTTTTGGGAATCGATTAAATCTGGTTTTCAGTCAGCATGTCTTTGCACGATACAACCTTTGGCTTTATTTGCACTCATTTAA

Protein Analysis

79

Amino Acids

9.02

Weight (kDa)

9.3

Isoelectric Point (pI)

49.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 36
AclWI GGATC 1 cut(s) 69
AcsI RAATTY 2 cut(s) 97, 129
AhdI GACNNNNNGTC 1 cut(s) 144
AluBI AGCT 1 cut(s) 155
AluI AGCT 1 cut(s) 155
Alw26I GTCTC 1 cut(s) 152
AlwI GGATC 1 cut(s) 69
ApoI RAATTY 2 cut(s) 97, 129
BaeGI GKGCMC 1 cut(s) 41
BanI GGYRCC 1 cut(s) 36
BcoDI GTCTC 1 cut(s) 152
BmeRI GACNNNNNGTC 1 cut(s) 144
BmiI GGNNCC 1 cut(s) 38
Bsa29I ATCGAT 1 cut(s) 170
BsaBI GATNNNNATC 1 cut(s) 60
BsaJI CCNNGG 1 cut(s) 92
Bse8I GATNNNNATC 1 cut(s) 60
BseCI ATCGAT 1 cut(s) 170
BseDI CCNNGG 1 cut(s) 92
BseJI GATNNNNATC 1 cut(s) 60
BseSI GKGCMC 1 cut(s) 41
BshNI GGYRCC 1 cut(s) 36
BshVI ATCGAT 1 cut(s) 170
BsmAI GTCTC 1 cut(s) 152
BsmBI CGTCTC 1 cut(s) 152
Bsp1286I GDGCHC 1 cut(s) 41
Bsp143I GATC 1 cut(s) 61
BspDI ATCGAT 1 cut(s) 170
BspLI GGNNCC 1 cut(s) 38
BspPI GGATC 1 cut(s) 69
BspT107I GGYRCC 1 cut(s) 36
BssECI CCNNGG 1 cut(s) 92
BssMI GATC 1 cut(s) 61
BssT1I CCWWGG 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 157
BstKTI GATC 1 cut(s) 64
BstMAI GTCTC 1 cut(s) 152
BstMBI GATC 1 cut(s) 61
BstMWI GCNNNNNNNGC 1 cut(s) 227
BstNSI RCATGY 1 cut(s) 198
BstSLI GKGCMC 1 cut(s) 41
BstXI CCANNNNNNTGG 1 cut(s) 14
Bsu15I ATCGAT 1 cut(s) 170
BsuTUI ATCGAT 1 cut(s) 170
Cac8I GCNNGC 1 cut(s) 157
ClaI ATCGAT 1 cut(s) 170
CviAII CATG 1 cut(s) 195
CviJI RGCY 5 cut(s) 105, 111, 155, 159, 221
CviKI_1 RGCY 5 cut(s) 105, 111, 155, 159, 221
DpnI GATC 1 cut(s) 63
DpnII GATC 1 cut(s) 61
DriI GACNNNNNGTC 1 cut(s) 144
Eam1105I GACNNNNNGTC 1 cut(s) 144
Eco130I CCWWGG 1 cut(s) 92
EcoRI GAATTC 1 cut(s) 129
EcoT14I CCWWGG 1 cut(s) 92
ErhI CCWWGG 1 cut(s) 92
Esp3I CGTCTC 1 cut(s) 152
FaeI CATG 1 cut(s) 198
FaiI YATR 4 cut(s) 78, 135, 142, 196
FatI CATG 1 cut(s) 194
Hin1II CATG 1 cut(s) 198
HinfI GANTC 1 cut(s) 167
Hpy188I TCNGA 1 cut(s) 30
HpyCH4V TGCA 2 cut(s) 204, 230
HpyF10VI GCNNNNNNNGC 1 cut(s) 227
Hsp92II CATG 1 cut(s) 198
Kzo9I GATC 1 cut(s) 61
LpnPI CCDG 3 cut(s) 35, 141, 165
MalI GATC 1 cut(s) 63
MboI GATC 1 cut(s) 61
MhlI GDGCHC 1 cut(s) 41
MluCI AATT 2 cut(s) 97, 129
MnlI CCTC 1 cut(s) 27
MseI TTAA 4 cut(s) 101, 117, 174, 238
MwoI GCNNNNNNNGC 1 cut(s) 227
NdeII GATC 1 cut(s) 61
NlaIII CATG 1 cut(s) 198
NlaIV GGNNCC 1 cut(s) 38
NspI RCATGY 1 cut(s) 198
PfeI GAWTC 1 cut(s) 167
PspN4I GGNNCC 1 cut(s) 38
SaqAI TTAA 4 cut(s) 101, 117, 174, 238
Sau3AI GATC 1 cut(s) 61
SduI GDGCHC 1 cut(s) 41
SetI ASST 3 cut(s) 38, 157, 217
SgeI CNNG 8 cut(s) 34, 45, 80, 105, 168, 192, 207, 217
Sse9I AATT 2 cut(s) 97, 129
StyI CCWWGG 1 cut(s) 92
TaqI TCGA 1 cut(s) 170
TasI AATT 2 cut(s) 97, 129
TfiI GAWTC 1 cut(s) 167
Tru1I TTAA 4 cut(s) 101, 117, 174, 238
Tru9I TTAA 4 cut(s) 101, 117, 174, 238
TspDTI ATGAA 2 cut(s) 39, 122
XapI RAATTY 2 cut(s) 97, 129
XceI RCATGY 1 cut(s) 198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.