Rh3DG364300

MORN repeat

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
45430448 .. 45440995
10548 bp
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UTR
Exon/CDS
Intron
Rh3DG364300.1

Sequence Viewer

Length: 315 bp
ATGCATTGGAATCTCCTGAAGAAGGAAGTTGTTAGATTCTTTTTAATTAACTTTGTTCTTTATAATCTTAATCAGGATTCATTCGAATCTCCTGAAGAAGGAAGACTTCCAGATGTCAAAAAAGTGGTTAGGGAAGAGAGGGGCCCGTATAGTGATCCTCAACATCCCTATTTCTATGAAGATGAAGATGTTTGGATGGCACCAGGCTTCATAAACCAATTCTATGAAACAGCATTAGATGATAAAGTAGCAAAGTCCACCACATTGTGCCTCCCTAGAGTAAGTGGGACTAAACAGTCAGGGTCACTGTTTTGA

Protein Analysis

104

Amino Acids

12.19

Weight (kDa)

5.1

Isoelectric Point (pI)

51.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 63
AasI GACNNNNNNGTC 1 cut(s) 295
AccB1I GGYRCC 1 cut(s) 199
AclWI GGATC 1 cut(s) 149
AcuI CTGAAG 2 cut(s) 38, 114
AdeI CACNNNGTG 1 cut(s) 267
AfiI CCNNNNNNNGG 2 cut(s) 22, 98
AjnI CCWGG 1 cut(s) 202
AlwI GGATC 1 cut(s) 149
AoxI GGCC 1 cut(s) 142
ApaI GGGCCC 1 cut(s) 146
AspS9I GGNCC 2 cut(s) 142, 143
AsuII TTCGAA 1 cut(s) 84
BaeGI GKGCMC 1 cut(s) 146
BanI GGYRCC 1 cut(s) 199
BanII GRGCYC 1 cut(s) 146
BbsI GAAGAC 1 cut(s) 109
BccI CCATC 1 cut(s) 190
BciT130I CCWGG 1 cut(s) 204
BfaI CTAG 1 cut(s) 276
Bme1390I CCNGG 1 cut(s) 204
BmgT120I GGNCC 2 cut(s) 142, 143
BmiI GGNNCC 3 cut(s) 143, 144, 201
BmrFI CCNGG 1 cut(s) 204
BpiI GAAGAC 1 cut(s) 109
Bpu14I TTCGAA 1 cut(s) 84
Bsc4I CCNNNNNNNGG 2 cut(s) 22, 98
BseBI CCWGG 1 cut(s) 204
BseGI GGATG 2 cut(s) 163, 201
BseLI CCNNNNNNNGG 2 cut(s) 22, 98
BseSI GKGCMC 1 cut(s) 146
BshFI GGCC 1 cut(s) 144
BshNI GGYRCC 1 cut(s) 199
BslFI GGGAC 1 cut(s) 301
BslI CCNNNNNNNGG 2 cut(s) 22, 98
BsmFI GGGAC 1 cut(s) 301
BsnI GGCC 1 cut(s) 144
Bsp119I TTCGAA 1 cut(s) 84
Bsp120I GGGCCC 1 cut(s) 142
Bsp1286I GDGCHC 1 cut(s) 146
Bsp143I GATC 1 cut(s) 154
BspANI GGCC 1 cut(s) 144
BspLI GGNNCC 3 cut(s) 143, 144, 201
BspPI GGATC 1 cut(s) 149
BspT104I TTCGAA 1 cut(s) 84
BspT107I GGYRCC 1 cut(s) 199
BssMI GATC 1 cut(s) 154
Bst2UI CCWGG 1 cut(s) 204
Bst4CI ACNGT 2 cut(s) 297, 309
Bst6I CTCTTC 1 cut(s) 129
BstBI TTCGAA 1 cut(s) 84
BstENI CCTNNNNNAGG 2 cut(s) 20, 96
BstF5I GGATG 2 cut(s) 163, 201
BstKTI GATC 1 cut(s) 157
BstMBI GATC 1 cut(s) 154
BstNI CCWGG 1 cut(s) 204
BstSCI CCNGG 1 cut(s) 202
BstSLI GKGCMC 1 cut(s) 146
BstV2I GAAGAC 1 cut(s) 109
BsuRI GGCC 1 cut(s) 144
BtsCI GGATG 2 cut(s) 163, 201
BtsIMutI CAGTG 1 cut(s) 305
Cfr13I GGNCC 2 cut(s) 142, 143
CviJI RGCY 2 cut(s) 144, 207
CviKI_1 RGCY 2 cut(s) 144, 207
DpnI GATC 1 cut(s) 156
DpnII GATC 1 cut(s) 154
DraIII CACNNNGTG 1 cut(s) 267
DrdI GACNNNNNNGTC 1 cut(s) 295
DseDI GACNNNNNNGTC 1 cut(s) 295
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
Eco24I GRGCYC 1 cut(s) 146
Eco57I CTGAAG 2 cut(s) 38, 114
EcoNI CCTNNNNNAGG 2 cut(s) 20, 96
EcoO109I RGGNCCY 1 cut(s) 142
EcoRII CCWGG 1 cut(s) 202
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 146
FaiI YATR 5 cut(s) 63, 150, 177, 212, 225
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FaqI GGGAC 1 cut(s) 301
FokI GGATG 2 cut(s) 150, 208
FriOI GRGCYC 1 cut(s) 146
FspBI CTAG 1 cut(s) 276
HaeIII GGCC 1 cut(s) 144
HinfI GANTC 4 cut(s) 10, 36, 77, 86
Hpy166II GTNNAC 1 cut(s) 258
Hpy188III TCNNGA 4 cut(s) 16, 74, 92, 110
Hpy8I GTNNAC 1 cut(s) 258
HpyAV CCTTC 2 cut(s) 16, 92
HpyCH4III ACNGT 2 cut(s) 297, 309
HpyCH4V TGCA 1 cut(s) 4
Kzo9I GATC 1 cut(s) 154
LpnPI CCDG 7 cut(s) 29, 59, 105, 123, 189, 216, 285
MaeI CTAG 1 cut(s) 276
MaeIII GTNAC 1 cut(s) 303
MalI GATC 1 cut(s) 156
MboI GATC 1 cut(s) 154
MboII GAAGA 6 cut(s) 31, 107, 114, 146, 191, 197
MhlI GDGCHC 1 cut(s) 146
MluCI AATT 2 cut(s) 45, 218
MnlI CCTC 3 cut(s) 132, 168, 281
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 3 cut(s) 44, 48, 69
MspR9I CCNGG 1 cut(s) 204
MvaI CCWGG 1 cut(s) 204
NdeII GATC 1 cut(s) 154
NlaIV GGNNCC 3 cut(s) 143, 144, 201
NmuCI GTSAC 1 cut(s) 303
NsiI ATGCAT 1 cut(s) 6
NspV TTCGAA 1 cut(s) 84
PacI TTAATTAA 1 cut(s) 48
PfeI GAWTC 4 cut(s) 10, 36, 77, 86
PsiI TTATAA 1 cut(s) 63
Psp6I CCWGG 1 cut(s) 202
PspGI CCWGG 1 cut(s) 202
PspN4I GGNNCC 3 cut(s) 143, 144, 201
PspOMI GGGCCC 1 cut(s) 142
PspPI GGNCC 2 cut(s) 142, 143
SaqAI TTAA 3 cut(s) 44, 48, 69
Sau3AI GATC 1 cut(s) 154
Sau96I GGNCC 2 cut(s) 142, 143
ScrFI CCNGG 1 cut(s) 204
SduI GDGCHC 1 cut(s) 146
SfuI TTCGAA 1 cut(s) 84
SgeI CNNG 8 cut(s) 28, 86, 104, 122, 157, 215, 216, 288
Sse9I AATT 2 cut(s) 45, 218
SspMI CTAG 1 cut(s) 276
StyD4I CCNGG 1 cut(s) 202
TaaI ACNGT 2 cut(s) 297, 309
TaqI TCGA 1 cut(s) 84
TasI AATT 2 cut(s) 45, 218
TfiI GAWTC 4 cut(s) 10, 36, 77, 86
Tru1I TTAA 3 cut(s) 44, 48, 69
Tru9I TTAA 3 cut(s) 44, 48, 69
TscAI CASTG 1 cut(s) 312
TseFI GTSAC 1 cut(s) 303
Tsp45I GTSAC 1 cut(s) 303
TspDTI ATGAA 5 cut(s) 69, 192, 198, 199, 240
TspRI CASTG 1 cut(s) 312
XagI CCTNNNNNAGG 2 cut(s) 20, 96
XspI CTAG 1 cut(s) 276
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.