RchiOBHm_Chr2g0111451

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
23099768 .. 23100358
591 bp
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UTR
Exon/CDS
Intron
PRQ48504

Sequence Viewer

Length: 144 bp
ATGACGCGTCGGGGAATCTGGAGTACGATTTCTATTGGAACCCAAAAAAGTGAAGGCAGAGACCATTGTGAGGTCGAAGATGGCTTGGATTTACGGCCAGCAGAGGAATGTCTCGGCTCAGTTGCTGCGTCTCTTTTTCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

47

Amino Acids

5.12

Weight (kDa)

4.79

Isoelectric Point (pI)

59.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018133)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 7
AcoI YGGCCR 1 cut(s) 95
AfaI GTAC 1 cut(s) 25
AfiI CCNNNNNNNGG 1 cut(s) 70
AflIII ACRYGT 1 cut(s) 5
Alw26I GTCTC 3 cut(s) 54, 116, 135
AlwNI CAGNNNCTG 1 cut(s) 125
AoxI GGCC 1 cut(s) 95
ApeKI GCWGC 1 cut(s) 125
BbvI GCAGC 1 cut(s) 112
BccI CCATC 1 cut(s) 74
BceAI ACGGC 1 cut(s) 110
BcoDI GTCTC 3 cut(s) 54, 116, 135
BisI GCNGC 1 cut(s) 126
BlsI GCNGC 1 cut(s) 127
BmiI GGNNCC 1 cut(s) 40
BpmI CTGGAG 1 cut(s) 40
BsaI GGTCTC 1 cut(s) 54
Bsc4I CCNNNNNNNGG 1 cut(s) 70
BseLI CCNNNNNNNGG 1 cut(s) 70
BseMII CTCAG 1 cut(s) 132
BseXI GCAGC 1 cut(s) 112
Bsh1236I CGCG 1 cut(s) 7
BshFI GGCC 1 cut(s) 97
BslI CCNNNNNNNGG 1 cut(s) 70
BsmAI GTCTC 3 cut(s) 54, 116, 135
BsmBI CGTCTC 1 cut(s) 135
BsnI GGCC 1 cut(s) 97
Bso31I GGTCTC 1 cut(s) 54
BspANI GGCC 1 cut(s) 97
BspCNI CTCAG 1 cut(s) 131
BspFNI CGCG 1 cut(s) 7
BspLI GGNNCC 1 cut(s) 40
BspTNI GGTCTC 1 cut(s) 54
BstC8I GCNNGC 1 cut(s) 99
BstDEI CTNAG 1 cut(s) 118
BstFNI CGCG 1 cut(s) 7
BstMAI GTCTC 3 cut(s) 54, 116, 135
BstUI CGCG 1 cut(s) 7
BstV1I GCAGC 1 cut(s) 112
BsuRI GGCC 1 cut(s) 97
Cac8I GCNNGC 1 cut(s) 99
CaiI CAGNNNCTG 1 cut(s) 125
CseI GACGC 2 cut(s) 13, 117
Csp6I GTAC 1 cut(s) 24
CviAII CATG 1 cut(s) 141
CviJI RGCY 3 cut(s) 84, 97, 117
CviKI_1 RGCY 3 cut(s) 84, 97, 117
CviQI GTAC 1 cut(s) 24
DdeI CTNAG 1 cut(s) 118
EaeI YGGCCR 1 cut(s) 95
Eco31I GGTCTC 1 cut(s) 54
Esp3I CGTCTC 1 cut(s) 135
FaeI CATG 1 cut(s) 144
FaiI YATR 1 cut(s) 142
FatI CATG 1 cut(s) 140
Fnu4HI GCNGC 1 cut(s) 126
Fsp4HI GCNGC 1 cut(s) 126
GluI GCNGC 1 cut(s) 126
GsuI CTGGAG 1 cut(s) 40
HaeIII GGCC 1 cut(s) 97
HgaI GACGC 2 cut(s) 13, 117
Hin1II CATG 1 cut(s) 144
HinfI GANTC 1 cut(s) 15
Hpy188III TCNNGA 1 cut(s) 19
Hpy99I CGWCG 1 cut(s) 12
HpyAV CCTTC 1 cut(s) 47
HpyF3I CTNAG 1 cut(s) 118
Hsp92II CATG 1 cut(s) 144
LpnPI CCDG 2 cut(s) 4, 111
Lsp1109I GCAGC 1 cut(s) 112
MboII GAAGA 1 cut(s) 89
MluI ACGCGT 1 cut(s) 5
MnlI CCTC 2 cut(s) 64, 97
MvnI CGCG 1 cut(s) 7
NlaIII CATG 1 cut(s) 144
NlaIV GGNNCC 1 cut(s) 40
NmeAIII GCCGAG 1 cut(s) 93
PfeI GAWTC 1 cut(s) 15
PkrI GCNGC 1 cut(s) 127
PspN4I GGNNCC 1 cut(s) 40
PstNI CAGNNNCTG 1 cut(s) 125
RsaI GTAC 1 cut(s) 25
RsaNI GTAC 1 cut(s) 24
SatI GCNGC 1 cut(s) 126
SetI ASST 1 cut(s) 75
SgeI CNNG 6 cut(s) 18, 23, 31, 97, 110, 125
TaqI TCGA 1 cut(s) 75
TfiI GAWTC 1 cut(s) 15
TseI GCWGC 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.