Rmu_co8021848.1_g000001

No description available

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8021848.1
Physical Location & Seq
Reverse (-)
1 .. 540
540 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8021848.1_g000001.1.cds

Sequence Viewer

Length: 220 bp
aagaagaaaatgtagaagaagaagaaggtggaggcaagaacgaaatcgaggatggtttctttaatagaaaggctacggaagcagaggaatatgggaatgaccaggaggatgaagaagaagatggtgaagatgaggaggaagaggatgatgcccaagtggtgaggctggtcttttatttacttggggaaggtgaggacgacggggatggcatggatgcaag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

72

Amino Acids

8.11

Weight (kDa)

4.05

Isoelectric Point (pI)

85.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018133)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AjnI CCWGG 1 cut(s) 101
AsuHPI GGTGA 3 cut(s) 136, 171, 202
BccI CCATC 3 cut(s) 46, 115, 199
BciT130I CCWGG 1 cut(s) 103
Bme1390I CCNGG 1 cut(s) 103
BmrFI CCNGG 1 cut(s) 103
BmsI GCATC 2 cut(s) 138, 204
BseBI CCWGG 1 cut(s) 103
BseGI GGATG 5 cut(s) 57, 114, 150, 210, 219
BseRI GAGGAG 1 cut(s) 148
Bst2UI CCWGG 1 cut(s) 103
Bst6I CTCTTC 1 cut(s) 134
BstF5I GGATG 5 cut(s) 57, 114, 150, 210, 219
BstMWI GCNNNNNNNGC 1 cut(s) 79
BstNI CCWGG 1 cut(s) 103
BstSCI CCNGG 1 cut(s) 101
BtsCI GGATG 5 cut(s) 57, 114, 150, 210, 219
CviAII CATG 1 cut(s) 210
CviJI RGCY 2 cut(s) 73, 165
CviKI_1 RGCY 2 cut(s) 73, 165
Eam1104I CTCTTC 1 cut(s) 134
EarI CTCTTC 1 cut(s) 134
EcoRII CCWGG 1 cut(s) 101
FaeI CATG 1 cut(s) 213
FaiI YATR 2 cut(s) 92, 211
FatI CATG 1 cut(s) 209
FokI GGATG 3 cut(s) 64, 121, 157
Hin1II CATG 1 cut(s) 213
HphI GGTGA 3 cut(s) 136, 171, 202
Hpy99I CGWCG 1 cut(s) 202
HpyAV CCTTC 2 cut(s) 19, 181
HpyCH4V TGCA 1 cut(s) 217
HpyF10VI GCNNNNNNNGC 1 cut(s) 79
Hsp92II CATG 1 cut(s) 213
LpnPI CCDG 3 cut(s) 88, 115, 151
LweI GCATC 2 cut(s) 138, 204
MboII GAAGA 9 cut(s) 16, 28, 31, 34, 124, 127, 130, 139, 151
MnlI CCTC 9 cut(s) 25, 42, 78, 99, 126, 129, 135, 155, 186
MseI TTAA 1 cut(s) 62
MspR9I CCNGG 1 cut(s) 103
MvaI CCWGG 1 cut(s) 103
MwoI GCNNNNNNNGC 1 cut(s) 79
NlaIII CATG 1 cut(s) 213
Psp6I CCWGG 1 cut(s) 101
PspGI CCWGG 1 cut(s) 101
SaqAI TTAA 1 cut(s) 62
ScrFI CCNGG 1 cut(s) 103
SetI ASST 2 cut(s) 30, 192
SfaNI GCATC 2 cut(s) 138, 204
SgeI CNNG 8 cut(s) 48, 60, 114, 115, 166, 178, 193, 213
StyD4I CCNGG 1 cut(s) 101
TaqI TCGA 1 cut(s) 47
Tru1I TTAA 1 cut(s) 62
Tru9I TTAA 1 cut(s) 62
TspDTI ATGAA 1 cut(s) 125
TspGWI ACGGA 1 cut(s) 91
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.