RLG00000030178

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
57052331 .. 57053824
1494 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030178

Sequence Viewer

Length: 378 bp
ATGGAGTTAGCCAAGGAGGAGGACGGCGAGGAATTTGATGAGGAATTGGAGGAGTCTGATGCAATGACTAAAATATCGAGGTCTGATGATGATGAGGTGGCGGAAAATGAAAAAGAAGAAGATGAATATGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAAATGTAGAAGAAGAAGAAGGTGGAGGCAAGAACGAAATCGAGGATGGTTTCTTTAATAGAAAGGCTACGGAAGCAGAGGAATATGGGAATGACAAGGAGGATGAAGAGGATGAAGAAGAAGATGGTGAAGATGAGGAGGAAGAGGATGATGCCCAGGAGGGGAAGGTGAGGACAACGGGGATGGCATGGATGCAAGGTACTGCATTCATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

126

Amino Acids

14.53

Weight (kDa)

4.05

Isoelectric Point (pI)

101.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0018133)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 101
AcsI RAATTY 1 cut(s) 32
AfaI GTAC 1 cut(s) 364
AfiI CCNNNNNNNGG 1 cut(s) 324
AjnI CCWGG 1 cut(s) 318
ApoI RAATTY 1 cut(s) 32
AsuHPI GGTGA 2 cut(s) 302, 343
BccI CCATC 3 cut(s) 203, 281, 340
BceAI ACGGC 1 cut(s) 40
BciT130I CCWGG 1 cut(s) 320
Bme1390I CCNGG 1 cut(s) 320
BmrFI CCNGG 1 cut(s) 320
BmsI GCATC 3 cut(s) 49, 304, 345
BsaJI CCNNGG 2 cut(s) 12, 318
Bsc4I CCNNNNNNNGG 1 cut(s) 324
Bse3DI GCAATG 1 cut(s) 69
BseBI CCWGG 1 cut(s) 320
BseDI CCNNGG 2 cut(s) 12, 318
BseGI GGATG 6 cut(s) 214, 271, 280, 316, 351, 360
BseLI CCNNNNNNNGG 1 cut(s) 324
BseMI GCAATG 1 cut(s) 69
BslI CCNNNNNNNGG 1 cut(s) 324
BsmI GAATGC 1 cut(s) 368
BspACI CCGC 1 cut(s) 101
BsrDI GCAATG 1 cut(s) 69
BssECI CCNNGG 2 cut(s) 12, 318
BssT1I CCWWGG 1 cut(s) 12
Bst2UI CCWGG 1 cut(s) 320
Bst6I CTCTTC 2 cut(s) 264, 300
BstF5I GGATG 6 cut(s) 214, 271, 280, 316, 351, 360
BstMWI GCNNNNNNNGC 1 cut(s) 236
BstNI CCWGG 1 cut(s) 320
BstSCI CCNGG 1 cut(s) 318
BtsCI GGATG 6 cut(s) 214, 271, 280, 316, 351, 360
Csp6I GTAC 1 cut(s) 363
CviAII CATG 1 cut(s) 351
CviJI RGCY 2 cut(s) 11, 230
CviKI_1 RGCY 2 cut(s) 11, 230
CviQI GTAC 1 cut(s) 363
Eam1104I CTCTTC 2 cut(s) 264, 300
EarI CTCTTC 2 cut(s) 264, 300
EciI GGCGGA 1 cut(s) 116
Eco130I CCWWGG 1 cut(s) 12
EcoRII CCWGG 1 cut(s) 318
EcoT14I CCWWGG 1 cut(s) 12
ErhI CCWWGG 1 cut(s) 12
FaeI CATG 1 cut(s) 354
FaiI YATR 3 cut(s) 129, 249, 352
FatI CATG 1 cut(s) 350
FokI GGATG 6 cut(s) 221, 278, 287, 323, 358, 367
Hin1II CATG 1 cut(s) 354
HinfI GANTC 1 cut(s) 53
HphI GGTGA 2 cut(s) 302, 343
Hpy188I TCNGA 2 cut(s) 58, 85
HpyAV CCTTC 2 cut(s) 176, 322
HpyCH4V TGCA 3 cut(s) 62, 358, 368
HpyF10VI GCNNNNNNNGC 1 cut(s) 236
Hsp92II CATG 1 cut(s) 354
LpnPI CCDG 2 cut(s) 305, 332
LweI GCATC 3 cut(s) 49, 304, 345
MluCI AATT 2 cut(s) 32, 44
MlyI GAGTC 1 cut(s) 62
MseI TTAA 1 cut(s) 219
MspR9I CCNGG 1 cut(s) 320
Mva1269I GAATGC 1 cut(s) 368
MvaI CCWGG 1 cut(s) 320
MwoI GCNNNNNNNGC 1 cut(s) 236
NlaIII CATG 1 cut(s) 354
PctI GAATGC 1 cut(s) 368
PleI GAGTC 1 cut(s) 61
PpsI GAGTC 1 cut(s) 61
Psp6I CCWGG 1 cut(s) 318
PspGI CCWGG 1 cut(s) 318
RsaI GTAC 1 cut(s) 364
RsaNI GTAC 1 cut(s) 363
SaqAI TTAA 1 cut(s) 219
SchI GAGTC 1 cut(s) 62
ScrFI CCNGG 1 cut(s) 320
SetI ASST 5 cut(s) 83, 99, 187, 333, 364
SfaNI GCATC 3 cut(s) 49, 304, 345
Sse9I AATT 2 cut(s) 32, 44
SsiI CCGC 1 cut(s) 101
StyD4I CCNGG 1 cut(s) 318
StyI CCWWGG 1 cut(s) 12
TaqI TCGA 2 cut(s) 77, 204
TasI AATT 2 cut(s) 32, 44
Tru1I TTAA 1 cut(s) 219
Tru9I TTAA 1 cut(s) 219
TspDTI ATGAA 5 cut(s) 123, 138, 282, 291, 361
TspGWI ACGGA 1 cut(s) 248
XapI RAATTY 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.