No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0115651 RchiOBHm_Chr2g0126391 RchiOBHm_Chr4g0402041 |
| rosa_laevigata | RLG00000010177 |
| rosa_roxburghii | Rroxscaffold_160G00433680 Rroxscaffold_2G00097020 Rroxscaffold_2G00128270 Rroxscaffold_7G00208410 |
| rosa_samantha | Rh2DG101300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 155 |
| AccII | CGCG | 1 cut(s) | 82 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 155 |
| AjnI | CCWGG | 1 cut(s) | 388 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 96, 128 |
| AluBI | AGCT | 1 cut(s) | 201 |
| AluI | AGCT | 1 cut(s) | 201 |
| Alw21I | GWGCWC | 1 cut(s) | 203 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 213 |
| ApeKI | GCWGC | 1 cut(s) | 84 |
| AspLEI | GCGC | 1 cut(s) | 84 |
| AsuHPI | GGTGA | 1 cut(s) | 263 |
| BanII | GRGCYC | 1 cut(s) | 203 |
| BbsI | GAAGAC | 2 cut(s) | 87, 133 |
| Bbv12I | GWGCWC | 1 cut(s) | 203 |
| BbvI | GCAGC | 1 cut(s) | 71 |
| BccI | CCATC | 1 cut(s) | 282 |
| BciT130I | CCWGG | 1 cut(s) | 390 |
| BisI | GCNGC | 1 cut(s) | 85 |
| BlsI | GCNGC | 1 cut(s) | 86 |
| Bme1390I | CCNGG | 1 cut(s) | 390 |
| BmrFI | CCNGG | 1 cut(s) | 390 |
| BpiI | GAAGAC | 2 cut(s) | 87, 133 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 155 |
| BseBI | CCWGG | 1 cut(s) | 390 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 155 |
| BseXI | GCAGC | 1 cut(s) | 71 |
| Bsh1236I | CGCG | 1 cut(s) | 82 |
| BsiHKAI | GWGCWC | 1 cut(s) | 203 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 155 |
| Bsp1286I | GDGCHC | 1 cut(s) | 203 |
| BspFNI | CGCG | 1 cut(s) | 82 |
| Bst2UI | CCWGG | 1 cut(s) | 390 |
| Bst4CI | ACNGT | 1 cut(s) | 41 |
| BstDEI | CTNAG | 1 cut(s) | 119 |
| BstFNI | CGCG | 1 cut(s) | 82 |
| BstHHI | GCGC | 1 cut(s) | 84 |
| BstNI | CCWGG | 1 cut(s) | 390 |
| BstSCI | CCNGG | 1 cut(s) | 388 |
| BstUI | CGCG | 1 cut(s) | 82 |
| BstV1I | GCAGC | 1 cut(s) | 71 |
| BstV2I | GAAGAC | 2 cut(s) | 87, 133 |
| CaiI | CAGNNNCTG | 1 cut(s) | 213 |
| CfoI | GCGC | 1 cut(s) | 84 |
| CseI | GACGC | 1 cut(s) | 219 |
| CviAII | CATG | 1 cut(s) | 33 |
| CviJI | RGCY | 2 cut(s) | 201, 307 |
| CviKI_1 | RGCY | 2 cut(s) | 201, 307 |
| DdeI | CTNAG | 1 cut(s) | 119 |
| Ecl136II | GAGCTC | 1 cut(s) | 201 |
| Eco24I | GRGCYC | 1 cut(s) | 203 |
| Eco53kI | GAGCTC | 1 cut(s) | 201 |
| EcoICRI | GAGCTC | 1 cut(s) | 201 |
| EcoRII | CCWGG | 1 cut(s) | 388 |
| EcoT38I | GRGCYC | 1 cut(s) | 203 |
| FaeI | CATG | 1 cut(s) | 36 |
| FaiI | YATR | 9 cut(s) | 34, 67, 74, 125, 179, 181, 192, 194, 351 |
| FatI | CATG | 1 cut(s) | 32 |
| FauNDI | CATATG | 1 cut(s) | 179 |
| Fnu4HI | GCNGC | 1 cut(s) | 85 |
| FriOI | GRGCYC | 1 cut(s) | 203 |
| Fsp4HI | GCNGC | 1 cut(s) | 85 |
| GlaI | GCGC | 1 cut(s) | 83 |
| GluI | GCNGC | 1 cut(s) | 85 |
| HgaI | GACGC | 1 cut(s) | 219 |
| HhaI | GCGC | 1 cut(s) | 84 |
| Hin1II | CATG | 1 cut(s) | 36 |
| Hin6I | GCGC | 1 cut(s) | 82 |
| HinP1I | GCGC | 1 cut(s) | 82 |
| HinfI | GANTC | 2 cut(s) | 112, 345 |
| HphI | GGTGA | 1 cut(s) | 263 |
| Hpy166II | GTNNAC | 2 cut(s) | 15, 44 |
| Hpy188I | TCNGA | 1 cut(s) | 261 |
| Hpy188III | TCNNGA | 6 cut(s) | 109, 156, 224, 333, 342, 365 |
| Hpy8I | GTNNAC | 2 cut(s) | 15, 44 |
| Hpy99I | CGWCG | 1 cut(s) | 235 |
| HpyCH4III | ACNGT | 1 cut(s) | 41 |
| HpyCH4V | TGCA | 3 cut(s) | 251, 267, 353 |
| HpyF3I | CTNAG | 1 cut(s) | 119 |
| Hsp92II | CATG | 1 cut(s) | 36 |
| HspAI | GCGC | 1 cut(s) | 82 |
| LpnPI | CCDG | 7 cut(s) | 122, 141, 199, 327, 350, 375, 402 |
| Lsp1109I | GCAGC | 1 cut(s) | 71 |
| MaeIII | GTNAC | 1 cut(s) | 35 |
| MboII | GAAGA | 4 cut(s) | 87, 133, 136, 212 |
| MhlI | GDGCHC | 1 cut(s) | 203 |
| MluCI | AATT | 3 cut(s) | 75, 104, 243 |
| MlyI | GAGTC | 1 cut(s) | 354 |
| MnlI | CCTC | 2 cut(s) | 195, 391 |
| MseI | TTAA | 1 cut(s) | 324 |
| MspR9I | CCNGG | 1 cut(s) | 390 |
| MvaI | CCWGG | 1 cut(s) | 390 |
| MvnI | CGCG | 1 cut(s) | 82 |
| NdeI | CATATG | 1 cut(s) | 179 |
| NlaIII | CATG | 1 cut(s) | 36 |
| PfeI | GAWTC | 1 cut(s) | 112 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 155 |
| PkrI | GCNGC | 1 cut(s) | 86 |
| PleI | GAGTC | 1 cut(s) | 353 |
| PpsI | GAGTC | 1 cut(s) | 353 |
| Psp124BI | GAGCTC | 1 cut(s) | 203 |
| Psp6I | CCWGG | 1 cut(s) | 388 |
| PspGI | CCWGG | 1 cut(s) | 388 |
| PstNI | CAGNNNCTG | 1 cut(s) | 213 |
| SacI | GAGCTC | 1 cut(s) | 203 |
| SaqAI | TTAA | 1 cut(s) | 324 |
| SatI | GCNGC | 1 cut(s) | 85 |
| SchI | GAGTC | 1 cut(s) | 354 |
| ScrFI | CCNGG | 1 cut(s) | 390 |
| SduI | GDGCHC | 1 cut(s) | 203 |
| SetI | ASST | 1 cut(s) | 203 |
| Sse9I | AATT | 3 cut(s) | 75, 104, 243 |
| SstI | GAGCTC | 1 cut(s) | 203 |
| StyD4I | CCNGG | 1 cut(s) | 388 |
| TaaI | ACNGT | 1 cut(s) | 41 |
| TaqI | TCGA | 1 cut(s) | 315 |
| TasI | AATT | 3 cut(s) | 75, 104, 243 |
| TfiI | GAWTC | 1 cut(s) | 112 |
| Tru1I | TTAA | 1 cut(s) | 324 |
| Tru9I | TTAA | 1 cut(s) | 324 |
| TseI | GCWGC | 1 cut(s) | 84 |
| TspDTI | ATGAA | 3 cut(s) | 17, 21, 279 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 155 |