RchiOBHm_Chr2g0142131

F-Box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0013699
Physical Location & Seq
Forward (+)
59588128 .. 59591457
3330 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51234

Sequence Viewer

Length: 1923 bp
ATGCTCTCTTCTTCTGGGGACCCAACTCGAGATAACATGAAGAGGAAAGGCATGTCTAGCACACCACAGGATGAAACCGGTGCTGTTGATTTGATTACACAAGCACCTGGAATTGAAAGAAAGAGAAAGAGAAAGGAATCTAAAACCATGGACCAGAACGTTGAGCGACAAAAGCAGCAAACTGCCGAAAATTCAGAGAGCTTGGACAAATGCATTACACAAGAAGCTGGATCTCGAAAAAAACGAAAGAGAGAAAAATCTAATATTACTGGCAAGAGGGGGAAGCTTAGAAAGAAGCAACCTGGTGGAGTTGTAAATGACATTGAAAAAAGTGTTGAGTCCACTGATCATATCTCACAATTGCCTGAATCTGTCATTCATCACATCCTTTCTCTCATTCGTTGTACAAAAGGTGCTGCTCGGACCAGTGTGTTGTCCAAGAGGTGGAGGGATGTATGGACTTCTTTCTCTGTTTTGACATTTGATCAACGCAAGTTTCAGAAACCAGAGGGAGTTCAAGATAAGAGCAAGAATGAGATGTTTAAGGACTTTATTGATCGGTCTCTTCAGAGCCAACTTGAGCAAAATTTAGGTATACGTAAATTTGAGCTACATTTGACATCCTATGATCAAGAAATGGCGCGTGGTATGGAACAGTGGGTTGGACTTGCAACTGAAAATAACATAAAAGAGCTAGGTCTCCATGTTCACACAAGAGGAAATAATGTTCACAATTTTCCCAGGAATGCGTTTGCTTCAGACACACTAACTCGATTAAGGCTGCAGAGCTGTAAACTGGAAACTAGCTGCGCTGTAAAGCTTCCCCATCTGCAAAAGATATATTTGCGGGATTGTAATGTTGATGAACAGAGAATCCAGCATATTATTTCCAGCTGCCCTTTAATTGAGGATTTGAGACTCATACGTTGCACGGGGTTGAAGTTTCTGCAGATTTCAAGTCTCCTTAAGCTTGATAGGGTTGAAGTATACCACTGCCGCGGACTGAAGAAGATTGAAGTTAAAGCTGCAAAGCTTCAGACATTTTGGTATTGTGGGAAGAATCGCACGTCTTGCAAACTTATCTTGAGTGGTTGTGAGTCTCTGAAAAGATTGACAATAGAGGACAAAAAAATGACAGACAATCAGTTTCGTGAACTATTCTTTGGCCTTCCTCTCCTTGAGAAGCTGGACCTAAGTAAATGCCTCAAATTGAAAAATATTACAATTGCAAGTCATCGACTAAACAGATTAGTCTTGAGGGGTTGCGAGAATCTACAGGGAGCCGAGATTGATACTCCAAATCTTCTTTCATTCGAGTATCAAGGTGATAAAATGCCCTTTTCTTTTCTGAATCCTATATCTTTGAAGGAGGCCAAGCTTTCTTTTGGGTCGGCTTCTGCTGGTCAGCTCAAATTCGATCACAATAAAGACGAGCCTTTTTGGTTTAAAAAGTTGCGGGATTTTCTTGCCAAGTTTGATCACAATACAGGCTTCAAACTGATTGTCCGCACTAATAAGAATGTTATCATCTACGAAGATCTAAGAGGAATTTCACTTCCTCCTGTTTGTGGTCTCAAACTTGAAATAATCCAGTCTTCCGTGGGTACTGAAGAACTATTAAACAGTTCATTGCAGAAATGGCACCCAGAGACCCTATCTGTAGTATCATCTTCTAGCAGTGAATTCCCCAAGTTGGTACATGAGAAGATCATGGAGAGTAAGAAGGATCCAACCTGCTGCACATCTAACCATTCAAACAATAAATGTTGGCGGCACTCTTTGAAGTTTGGCAAGAAAGTGAACTTGAAGCGGGCCAAAGGCAAGTCGGGCTGGATTGCTTGGTTGAAGTTGAAGTCTTGTCCAACTGACCTGTACGAGATTACTTGTTTTAGTTTATTAAATAAAAAATCTGAGAAGCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD Jacalin

Protein Analysis

640

Amino Acids

73.35

Weight (kDa)

9.58

Isoelectric Point (pI)

50.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 196 - 375 2.4e-23 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 218 - 350 5.5e-16 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 363 - 461 8e-11 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013699)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g32840 FvH4_6g32840 FvH4_6g32840 FvH4_6g32840
malus_domestica MD09G1197600.v1.1 MD17G1178500.v1.1
prunus_persica Prupe.3G053600_v2.0.a1
pyrus_communis pycom09g11420 pycom17g18740
rosa_chinensis RchiOBHm_Chr2g0142131
rosa_laevigata RLG00000019948
rosa_roxburghii Rroxscaffold_2G00103640
rosa_rugosa Rorug02G0370700
rosa_samantha Rh2AG422600 Rh2BG432800 Rh2CG409500 Rh2DG442500
rosa_wichuraiana Rw2G034630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1742
AccB1I GGYRCC 1 cut(s) 1641
AccB7I CCANNNNNTGG 1 cut(s) 444
AccI GTMKAC 2 cut(s) 595, 987
AccII CGCG 2 cut(s) 643, 999
AciI CCGC 7 cut(s) 847, 997, 999, 1456, 1507, 1771, 1810
AclI AACGTT 1 cut(s) 159
AclWI GGATC 3 cut(s) 238, 1721, 1734
AcsI RAATTY 6 cut(s) 190, 586, 602, 1412, 1548, 1682
AcuI CTGAAG 5 cut(s) 551, 741, 1019, 1025, 1629
AfaI GTAC 4 cut(s) 406, 1606, 1698, 1874
AfiI CCNNNNNNNGG 3 cut(s) 444, 1568, 1693
AflII CTTAAG 1 cut(s) 965
AgeI ACCGGT 1 cut(s) 77
AjiI CACGTC 1 cut(s) 1068
AjnI CCWGG 3 cut(s) 106, 301, 740
AjuI GAANNNNNNNTTGG 6 cut(s) 645, 677, 1146, 1178, 1291, 1323
AloI GAACNNNNNNTCC 4 cut(s) 711, 743, 858, 890
Alw26I GTCTC 7 cut(s) 567, 704, 910, 965, 1104, 1577, 1643
AlwI GGATC 3 cut(s) 238, 1721, 1734
Ama87I CYCGRG 1 cut(s) 27
AoxI GGCC 3 cut(s) 1165, 1371, 1812
ApeKI GCWGC 7 cut(s) 175, 416, 781, 807, 894, 1025, 1737
ApoI RAATTY 6 cut(s) 190, 586, 602, 1412, 1548, 1682
ArsI GACNNNNNNTTYG 2 cut(s) 1488, 1520
AsiGI ACCGGT 1 cut(s) 77
AspLEI GCGC 2 cut(s) 643, 812
AspS9I GGNCC 5 cut(s) 19, 151, 423, 1189, 1812
AsuHPI GGTGA 1 cut(s) 1337
AvaI CYCGRG 1 cut(s) 27
AvaII GGWCC 4 cut(s) 19, 151, 423, 1189
BamHI GGATCC 1 cut(s) 1726
BanI GGYRCC 1 cut(s) 1641
BbsI GAAGAC 1 cut(s) 1587
BbvI GCAGC 7 cut(s) 187, 403, 768, 794, 881, 1012, 1724
BccI CCATC 1 cut(s) 834
BciT130I CCWGG 3 cut(s) 108, 303, 742
BclI TGATCA 4 cut(s) 346, 484, 628, 1477
BcoDI GTCTC 7 cut(s) 567, 704, 910, 965, 1104, 1577, 1643
BfaI CTAG 4 cut(s) 57, 695, 804, 1674
BfmI CTRYAG 4 cut(s) 782, 947, 1274, 1659
BfrI CTTAAG 1 cut(s) 965
BfuAI ACCTGC 1 cut(s) 1742
BglII AGATCT 1 cut(s) 1537
BisI GCNGC 9 cut(s) 176, 417, 782, 808, 895, 997, 1026, 1738, 1772
BlsI GCNGC 9 cut(s) 177, 418, 783, 809, 896, 998, 1027, 1739, 1773
Bme1390I CCNGG 3 cut(s) 108, 303, 742
Bme18I GGWCC 4 cut(s) 19, 151, 423, 1189
BmeT110I CYCGRG 1 cut(s) 27
BmgBI CACGTC 1 cut(s) 1068
BmgT120I GGNCC 5 cut(s) 19, 151, 423, 1189, 1812
BmiI GGNNCC 5 cut(s) 20, 21, 1282, 1643, 1728
BmrFI CCNGG 3 cut(s) 108, 303, 742
BpiI GAAGAC 1 cut(s) 1587
BpuEI CTTGAG 4 cut(s) 599, 1105, 1199, 1276
BsaAI YACGTR 1 cut(s) 599
BsaI GGTCTC 4 cut(s) 567, 704, 1577, 1643
BsaJI CCNNGG 4 cut(s) 147, 740, 997, 1599
BsaWI WCCGGW 1 cut(s) 77
Bsc4I CCNNNNNNNGG 3 cut(s) 444, 1568, 1693
Bse118I RCCGGY 1 cut(s) 77
Bse1I ACTGG 4 cut(s) 274, 426, 801, 1591
Bse3DI GCAATG 1 cut(s) 1628
BseBI CCWGG 3 cut(s) 108, 303, 742
BseDI CCNNGG 4 cut(s) 147, 740, 997, 1599
BseGI GGATG 4 cut(s) 76, 384, 457, 620
BseLI CCNNNNNNNGG 3 cut(s) 444, 1568, 1693
BseMI GCAATG 1 cut(s) 1628
BseMII CTCAG 1 cut(s) 1902
BseNI ACTGG 4 cut(s) 274, 426, 801, 1591
BseXI GCAGC 7 cut(s) 187, 403, 768, 794, 881, 1012, 1724
BsgI GTGCAG 1 cut(s) 1723
Bsh1236I CGCG 2 cut(s) 643, 999
BshFI GGCC 3 cut(s) 1167, 1373, 1814
BshNI GGYRCC 1 cut(s) 1641
BshTI ACCGGT 1 cut(s) 77
BsiHKCI CYCGRG 1 cut(s) 27
BsiSI CCGG 1 cut(s) 78
BslFI GGGAC 1 cut(s) 32
BslI CCNNNNNNNGG 3 cut(s) 444, 1568, 1693
BsmAI GTCTC 7 cut(s) 567, 704, 910, 965, 1104, 1577, 1643
BsmFI GGGAC 1 cut(s) 32
BsmI GAATGC 1 cut(s) 751
BsnI GGCC 3 cut(s) 1167, 1373, 1814
Bso31I GGTCTC 4 cut(s) 567, 704, 1577, 1643
BsoBI CYCGRG 1 cut(s) 27
Bsp1407I TGTACA 1 cut(s) 404
Bsp19I CCATGG 1 cut(s) 147
BspACI CCGC 7 cut(s) 847, 997, 999, 1456, 1507, 1771, 1810
BspANI GGCC 3 cut(s) 1167, 1373, 1814
BspCNI CTCAG 1 cut(s) 1903
BspFNI CGCG 2 cut(s) 643, 999
BspLI GGNNCC 5 cut(s) 20, 21, 1282, 1643, 1728
BspMAI CTGCAG 2 cut(s) 786, 951
BspMI ACCTGC 1 cut(s) 1742
BspPI GGATC 3 cut(s) 238, 1721, 1734
BspT107I GGYRCC 1 cut(s) 1641
BspTI CTTAAG 1 cut(s) 965
BspTNI GGTCTC 4 cut(s) 567, 704, 1577, 1643
BsrDI GCAATG 1 cut(s) 1628
BsrFI RCCGGY 1 cut(s) 77
BsrGI TGTACA 1 cut(s) 404
BsrI ACTGG 4 cut(s) 274, 426, 801, 1591
BssAI RCCGGY 1 cut(s) 77
BssECI CCNNGG 4 cut(s) 147, 740, 997, 1599
BssNAI GTATAC 2 cut(s) 596, 988
BssT1I CCWWGG 1 cut(s) 147
Bst1107I GTATAC 2 cut(s) 596, 988
Bst2UI CCWGG 3 cut(s) 108, 303, 742
Bst4CI ACNGT 2 cut(s) 657, 1625
Bst6I CTCTTC 3 cut(s) 13, 35, 570
BstAFI CTTAAG 1 cut(s) 965
BstAPI GCANNNNNTGC 1 cut(s) 1071
BstAUI TGTACA 1 cut(s) 404
BstBAI YACGTR 1 cut(s) 599
BstC8I GCNNGC 1 cut(s) 1812
BstDEI CTNAG 4 cut(s) 287, 1193, 1541, 1911
BstDSI CCRYGG 3 cut(s) 147, 997, 1599
BstF5I GGATG 4 cut(s) 76, 384, 457, 620
BstFNI CGCG 2 cut(s) 643, 999
BstHHI GCGC 2 cut(s) 643, 812
BstMAI GTCTC 7 cut(s) 567, 704, 910, 965, 1104, 1577, 1643
BstMWI GCNNNNNNNGC 5 cut(s) 57, 172, 1071, 1639, 1827
BstNI CCWGG 3 cut(s) 108, 303, 742
BstNSI RCATGY 1 cut(s) 55
BstSCI CCNGG 3 cut(s) 106, 301, 740
BstSFI CTRYAG 4 cut(s) 782, 947, 1274, 1659
BstSNI TACGTA 1 cut(s) 599
BstUI CGCG 2 cut(s) 643, 999
BstV1I GCAGC 7 cut(s) 187, 403, 768, 794, 881, 1012, 1724
BstV2I GAAGAC 1 cut(s) 1587
BstX2I RGATCY 3 cut(s) 230, 1537, 1726
BstYI RGATCY 3 cut(s) 230, 1537, 1726
BstZ17I GTATAC 2 cut(s) 596, 988
BsuRI GGCC 3 cut(s) 1167, 1373, 1814
BtgI CCRYGG 3 cut(s) 147, 997, 1599
BtrI CACGTC 1 cut(s) 1068
BtsCI GGATG 4 cut(s) 76, 384, 457, 620
BtsI GCAGTG 2 cut(s) 991, 1684
BtsIMutI CAGTG 5 cut(s) 342, 433, 662, 991, 1684
BveI ACCTGC 1 cut(s) 1742
Cac8I GCNNGC 1 cut(s) 1812
CfoI GCGC 2 cut(s) 643, 812
Cfr10I RCCGGY 1 cut(s) 77
Cfr13I GGNCC 5 cut(s) 19, 151, 423, 1189, 1812
Cfr42I CCGCGG 1 cut(s) 1000
CsiI ACCWGGT 1 cut(s) 301
Csp6I GTAC 4 cut(s) 405, 1605, 1697, 1873
CspAI ACCGGT 1 cut(s) 77
CviAII CATG 6 cut(s) 37, 52, 148, 704, 1700, 1711
CviQI GTAC 4 cut(s) 405, 1605, 1697, 1873
DdeI CTNAG 4 cut(s) 287, 1193, 1541, 1911
DraI TTTAAA 1 cut(s) 1447
Eam1104I CTCTTC 3 cut(s) 13, 35, 570
EarI CTCTTC 3 cut(s) 13, 35, 570
Eco105I TACGTA 1 cut(s) 599
Eco130I CCWWGG 1 cut(s) 147
Eco31I GGTCTC 4 cut(s) 567, 704, 1577, 1643
Eco47I GGWCC 4 cut(s) 19, 151, 423, 1189
Eco57I CTGAAG 5 cut(s) 551, 741, 1019, 1025, 1629
Eco88I CYCGRG 1 cut(s) 27
EcoO109I RGGNCCY 1 cut(s) 19
EcoRI GAATTC 1 cut(s) 1682
EcoRII CCWGG 3 cut(s) 106, 301, 740
EcoT14I CCWWGG 1 cut(s) 147
EcoT22I ATGCAT 1 cut(s) 215
ErhI CCWWGG 1 cut(s) 147
FaeI CATG 6 cut(s) 40, 55, 151, 707, 1703, 1714
FaqI GGGAC 1 cut(s) 32
FatI CATG 6 cut(s) 36, 51, 147, 703, 1699, 1710
FauI CCCGC 3 cut(s) 840, 1449, 1803
FbaI TGATCA 4 cut(s) 346, 484, 628, 1477
FblI GTMKAC 2 cut(s) 595, 987
Fnu4HI GCNGC 9 cut(s) 176, 417, 782, 808, 895, 997, 1026, 1738, 1772
FokI GGATG 4 cut(s) 83, 371, 464, 607
Fsp4HI GCNGC 9 cut(s) 176, 417, 782, 808, 895, 997, 1026, 1738, 1772
FspBI CTAG 4 cut(s) 57, 695, 804, 1674
GlaI GCGC 2 cut(s) 642, 811
GluI GCNGC 9 cut(s) 176, 417, 782, 808, 895, 997, 1026, 1738, 1772
HaeIII GGCC 3 cut(s) 1167, 1373, 1814
HapII CCGG 1 cut(s) 78
HhaI GCGC 2 cut(s) 643, 812
Hin1II CATG 6 cut(s) 40, 55, 151, 707, 1703, 1714
Hin6I GCGC 2 cut(s) 641, 810
HinP1I GCGC 2 cut(s) 641, 810
HindIII AAGCTT 5 cut(s) 284, 818, 968, 1031, 1376
HinfI GANTC 9 cut(s) 137, 338, 368, 873, 918, 1060, 1097, 1270, 1351
HpaII CCGG 1 cut(s) 78
HphI GGTGA 1 cut(s) 1337
Hpy166II GTNNAC 8 cut(s) 342, 596, 709, 730, 794, 988, 1154, 1801
Hpy188I TCNGA 9 cut(s) 196, 423, 501, 570, 760, 1038, 1104, 1350, 1912
Hpy188III TCNNGA 7 cut(s) 29, 234, 518, 632, 1084, 1151, 1255
Hpy8I GTNNAC 8 cut(s) 342, 596, 709, 730, 794, 988, 1154, 1801
HpyAV CCTTC 3 cut(s) 1178, 1360, 1717
HpyCH4III ACNGT 2 cut(s) 657, 1625
HpyCH4IV ACGT 4 cut(s) 159, 598, 925, 1067
HpyF10VI GCNNNNNNNGC 5 cut(s) 57, 172, 1071, 1639, 1827
HpyF3I CTNAG 4 cut(s) 287, 1193, 1541, 1911
HpySE526I ACGT 4 cut(s) 159, 598, 925, 1067
Hsp92II CATG 6 cut(s) 40, 55, 151, 707, 1703, 1714
HspAI GCGC 2 cut(s) 641, 810
KflI GGGWCCC 1 cut(s) 19
Ksp22I TGATCA 4 cut(s) 346, 484, 628, 1477
KspI CCGCGG 1 cut(s) 1000
LmnI GCTCC 1 cut(s) 1280
Lsp1109I GCAGC 7 cut(s) 187, 403, 768, 794, 881, 1012, 1724
MabI ACCWGGT 1 cut(s) 301
MaeI CTAG 4 cut(s) 57, 695, 804, 1674
MaeII ACGT 4 cut(s) 159, 598, 925, 1067
MfeI CAATTG 2 cut(s) 359, 1224
MflI RGATCY 3 cut(s) 230, 1537, 1726
MlyI GAGTC 3 cut(s) 347, 912, 1106
MmeI TCCRAC 3 cut(s) 643, 1754, 1886
Mph1103I ATGCAT 1 cut(s) 215
MseI TTAA 8 cut(s) 543, 776, 902, 966, 1020, 1446, 1619, 1898
MspA1I CMGCKG 2 cut(s) 894, 999
MspCI CTTAAG 1 cut(s) 965
MspI CCGG 1 cut(s) 78
MspR9I CCNGG 3 cut(s) 108, 303, 742
MunI CAATTG 2 cut(s) 359, 1224
Mva1269I GAATGC 1 cut(s) 751
MvaI CCWGG 3 cut(s) 108, 303, 742
MvnI CGCG 2 cut(s) 643, 999
MwoI GCNNNNNNNGC 5 cut(s) 57, 172, 1071, 1639, 1827
NcoI CCATGG 1 cut(s) 147
NlaIII CATG 6 cut(s) 40, 55, 151, 707, 1703, 1714
NlaIV GGNNCC 5 cut(s) 20, 21, 1282, 1643, 1728
NmeAIII GCCGAG 1 cut(s) 1309
NsiI ATGCAT 1 cut(s) 215
NspI RCATGY 1 cut(s) 55
PaeR7I CTCGAG 1 cut(s) 27
PcsI WCGNNNNNNNCGW 1 cut(s) 241
PctI GAATGC 1 cut(s) 751
PfeI GAWTC 6 cut(s) 137, 368, 873, 1060, 1270, 1351
PflMI CCANNNNNTGG 1 cut(s) 444
PinAI ACCGGT 1 cut(s) 77
PkrI GCNGC 9 cut(s) 177, 418, 783, 809, 896, 998, 1027, 1739, 1773
PleI GAGTC 3 cut(s) 346, 912, 1105
PpsI GAGTC 3 cut(s) 346, 912, 1105
Ppu21I YACGTR 1 cut(s) 599
PpuMI RGGWCCY 1 cut(s) 19
Psp1406I AACGTT 1 cut(s) 159
Psp5II RGGWCCY 1 cut(s) 19
Psp6I CCWGG 3 cut(s) 106, 301, 740
PspGI CCWGG 3 cut(s) 106, 301, 740
PspN4I GGNNCC 5 cut(s) 20, 21, 1282, 1643, 1728
PspPI GGNCC 5 cut(s) 19, 151, 423, 1189, 1812
PspPPI RGGWCCY 1 cut(s) 19
PstI CTGCAG 2 cut(s) 786, 951
PsuI RGATCY 3 cut(s) 230, 1537, 1726
PvuII CAGCTG 1 cut(s) 894
RsaI GTAC 4 cut(s) 406, 1606, 1698, 1874
RsaNI GTAC 4 cut(s) 405, 1605, 1697, 1873
SacII CCGCGG 1 cut(s) 1000
SaqAI TTAA 8 cut(s) 543, 776, 902, 966, 1020, 1446, 1619, 1898
SatI GCNGC 9 cut(s) 176, 417, 782, 808, 895, 997, 1026, 1738, 1772
Sau96I GGNCC 5 cut(s) 19, 151, 423, 1189, 1812
SchI GAGTC 3 cut(s) 347, 912, 1106
ScrFI CCNGG 3 cut(s) 108, 303, 742
SexAI ACCWGGT 1 cut(s) 301
SfcI CTRYAG 4 cut(s) 782, 947, 1274, 1659
Sfr274I CTCGAG 1 cut(s) 27
Sfr303I CCGCGG 1 cut(s) 1000
SgrBI CCGCGG 1 cut(s) 1000
SinI GGWCC 4 cut(s) 19, 151, 423, 1189
SlaI CTCGAG 1 cut(s) 27
SmlI CTYRAG 6 cut(s) 27, 578, 965, 1084, 1178, 1255
SmoI CTYRAG 6 cut(s) 27, 578, 965, 1084, 1178, 1255
SnaBI TACGTA 1 cut(s) 599
SsiI CCGC 7 cut(s) 847, 997, 999, 1456, 1507, 1771, 1810
SspI AATATT 2 cut(s) 265, 1219
SspMI CTAG 4 cut(s) 57, 695, 804, 1674
StyD4I CCNGG 3 cut(s) 106, 301, 740
StyI CCWWGG 1 cut(s) 147
TaaI ACNGT 2 cut(s) 657, 1625
TaiI ACGT 4 cut(s) 162, 601, 928, 1070
TaqI TCGA 6 cut(s) 28, 235, 772, 1237, 1314, 1416
TaqII GACCGA 1 cut(s) 549
TatI WGTACW 1 cut(s) 404
TauI GCSGC 2 cut(s) 999, 1774
TfiI GAWTC 6 cut(s) 137, 368, 873, 1060, 1270, 1351
Tru1I TTAA 8 cut(s) 543, 776, 902, 966, 1020, 1446, 1619, 1898
Tru9I TTAA 8 cut(s) 543, 776, 902, 966, 1020, 1446, 1619, 1898
TscAI CASTG 5 cut(s) 349, 433, 662, 998, 1684
TseI GCWGC 7 cut(s) 175, 416, 781, 807, 894, 1025, 1737
TspDTI ATGAA 6 cut(s) 53, 87, 368, 879, 1299, 1617
TspGWI ACGGA 1 cut(s) 1588
TspRI CASTG 5 cut(s) 349, 433, 662, 998, 1684
Van91I CCANNNNNTGG 1 cut(s) 444
Vha464I CTTAAG 1 cut(s) 965
VpaK11BI GGWCC 4 cut(s) 19, 151, 423, 1189
XapI RAATTY 6 cut(s) 190, 586, 602, 1412, 1548, 1682
XceI RCATGY 1 cut(s) 55
XhoI CTCGAG 1 cut(s) 27
XmiI GTMKAC 2 cut(s) 595, 987
XspI CTAG 4 cut(s) 57, 695, 804, 1674
Zsp2I ATGCAT 1 cut(s) 215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.