Rh2DG442500

F-Box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0013699
Physical Location & Seq
Forward (+)
64276435 .. 64288914
12480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG442500.1

Sequence Viewer

Length: 2070 bp
ATGGTGGCTGGGGCCTCATGCTCCACACTGCTTGTGCATTGGGGTTGGCCTGTGGCTACAACTATTGTATATACTGATATTACTGCGGTTGTTATCGAGAAGTTGGTGTTGGCAATTGGCCAGGGAGAGGAAAGACGGGTTATGAGGCTCTCTTCTTCTGGGGACCCAACTCGAGATAACATGAAGAGGAAAGGCATGTCTAGCACACCACAGGATGAAACCGTTGCTGTTGATTTGATTACACAAGCACCTGGAATTGAAAGAAAGAGAAAGAGAAAGGAATCTAATACCATTGACCAGAACGTTGAGCGACAAAAGCAGCAAACTGCCGAAAATTCAGAGAGCTTGGACAAATGCATTACACAAGAAGCTGGATCTCGAAAAAAACGAAAGAGAGAAAAATCTAATATTACTGGCAAGAGGGGGAAGCTTAGAAAGAAGCAACCTGGTGGAGTTGTAAATGGCATTGAAAAAAGTGTTGAGTCCACTGATCATATCTCACAATTGCCTGAATCTGTCATTCATCACATCCTTTCTCTCATTCGTTGTACAAAAGGTGCTGCTCGGACCAGTGTGTTGTCCAAGAGGTGGAGGGATGTGTGGACTTCTTTCTCTGTTTTGACATTTGATCAACGCAAGTTTCAGAAACCAGAGGGAGTTCAAGATAAGAGCAAGAATGAGATGTTTAAGGACTTTATTGATCGGTCTCTTCAGAGCCAACTTGAGCAAAATCTAGGTATACGTAAATTTGAGCTACATTTGACCTCCTATGATCAAGAAATGGCGCGTGGTATGGAACAGTGGGTTGGACTTGCAACTGAAAATAACATAAAAGAGCTAGGTCTCCATGTTCACACAAGAGGAAATAATGTTCACAATTTTCCCGGGAATGCGTTTGCTTCAGATACACTAACTCGATTAAGGCTGCAGAGTTGTAAACTGGAAACTAGCTGCGCTGTAAAGCTTCCCCATCTGCAAAAGCTATATTTGCGGGATTGTAATGTTGATGAACAGAGAATCCAGCATATTATTTCCAGCTGCCCTTTAATTGAGGATTTGAGACTCATACGTTGCACGGGGTTGAAGTTTCTGCAGATTTCAAGTCTCCTTAAGCTTGATAGGGTTGAAGTATACCACTGCCGCGGACTGAAGAAGATTGAAGTTAAAGCTGCAAACCTTCAGACATTTTGGTATTGTGGGAAGAATCGCACGTCTTGCAAACTTATCTTGAGTGGTTGTGAGTCTCTGAAAAGATTGACACTAGAGGACAAAAAAATGACAGACAATCAGTTTCGTGAACTATTCTTTGGCCTTCCTCTCCTCGAGAAGCTGGACCTAAGTAAATGCCTCAAATTGAAAAATATTACAATTGCAAGTCATCGACTAAACAGATTAGTCTTGAGGGGTTGCGAGAATCTACAGGGAGCCGAGATTGATACTCCAAATCTTCTTTCATTTGAGTATCAAGGTGATAAAATGCCCTTTTCTTTTCTGAATCCTATATCTTTGAAGGAGGCCAAGCTTTCTTTTGGGTCGGCTTCTGCTGGTCAGCTCAAATTCGATCACAATAAAGACGAGCCTTTTTGGTTTAAAAAGTTGCGGGATTTTCTTGCCAAGTTTGATCACAATACAGGCTTCAAACTGATTGTCCGCACTAATAAGAATGTTATCATCTACGAAGATCTAAGAGGAATTTCACTTCCTCCTGTTCGTGGTCTCAAACTTGAAATAATCCAGTCTTCCGTGGGTACTGAAGAACTATTAAACAGTTCATTGCAGAAATGGCACCCAGAGACCCTATCTGTAGTATCATCTTCTAGCAGTGAATTCCCCAAGTTGGTACATGAGAAGATCATGGAGAGTAAGAAGGATCCAACCTGCTGCACATCTAACCATTCAAACAATAAATGTTGGCGGCACTCTTTGAAGTTTGGCAAGAAAGTGAACTTGAAGCGGGCCAAAGGCAAGTCGGGCTGGATTGCTTGGTTGAAGTTGAAGTCTTGTCCAACTGACCTGTACGAGATTACTTGTTTCAGTTTATTAAATAAAAAATCTGATAAGCTTTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD Jacalin

Protein Analysis

689

Amino Acids

78.59

Weight (kDa)

9.56

Isoelectric Point (pI)

48.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 244 - 404 1.1e-23 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 266 - 399 1.6e-16 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 411 - 509 2.1e-11 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013699)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g32840 FvH4_6g32840 FvH4_6g32840 FvH4_6g32840
malus_domestica MD09G1197600.v1.1 MD17G1178500.v1.1
prunus_persica Prupe.3G053600_v2.0.a1
pyrus_communis pycom09g11420 pycom17g18740
rosa_chinensis RchiOBHm_Chr2g0142131
rosa_laevigata RLG00000019948
rosa_roxburghii Rroxscaffold_2G00103640
rosa_rugosa Rorug02G0370700
rosa_samantha Rh2AG422600 Rh2BG432800 Rh2CG409500 Rh2DG442500
rosa_wichuraiana Rw2G034630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1886
AccB1I GGYRCC 1 cut(s) 1785
AccB7I CCANNNNNTGG 1 cut(s) 588
AccI GTMKAC 2 cut(s) 739, 1131
AccII CGCG 2 cut(s) 787, 1143
AciI CCGC 8 cut(s) 86, 991, 1141, 1143, 1600, 1651, 1915, 1954
AclI AACGTT 1 cut(s) 303
AclWI GGATC 3 cut(s) 382, 1865, 1878
AcoI YGGCCR 1 cut(s) 118
AcsI RAATTY 5 cut(s) 334, 746, 1556, 1692, 1826
AcuI CTGAAG 5 cut(s) 695, 885, 1163, 1169, 1773
AfaI GTAC 4 cut(s) 550, 1750, 1842, 2018
AfiI CCNNNNNNNGG 4 cut(s) 127, 588, 1712, 1837
AflII CTTAAG 1 cut(s) 1109
AjiI CACGTC 1 cut(s) 1212
AjnI CCWGG 3 cut(s) 120, 250, 445
AjuI GAANNNNNNNTTGG 8 cut(s) 92, 124, 789, 821, 1290, 1322, 1435, 1467
AloI GAACNNNNNNTCC 4 cut(s) 855, 887, 1002, 1034
Alw26I GTCTC 7 cut(s) 711, 848, 1054, 1109, 1248, 1721, 1787
AlwI GGATC 3 cut(s) 382, 1865, 1878
Ama87I CYCGRG 3 cut(s) 171, 884, 1322
AoxI GGCC 6 cut(s) 12, 47, 118, 1309, 1515, 1956
ApeKI GCWGC 7 cut(s) 319, 560, 925, 951, 1038, 1169, 1881
ApoI RAATTY 5 cut(s) 334, 746, 1556, 1692, 1826
ArsI GACNNNNNNTTYG 2 cut(s) 1632, 1664
AspLEI GCGC 2 cut(s) 787, 956
AspS9I GGNCC 5 cut(s) 12, 163, 567, 1333, 1956
AsuC2I CCSGG 2 cut(s) 885, 886
AsuHPI GGTGA 1 cut(s) 1481
AvaI CYCGRG 3 cut(s) 171, 884, 1322
AvaII GGWCC 3 cut(s) 163, 567, 1333
BalI TGGCCA 1 cut(s) 120
BamHI GGATCC 1 cut(s) 1870
BanI GGYRCC 1 cut(s) 1785
BbsI GAAGAC 1 cut(s) 1731
BbvI GCAGC 7 cut(s) 331, 547, 912, 938, 1025, 1156, 1868
BccI CCATC 1 cut(s) 978
BciT130I CCWGG 3 cut(s) 122, 252, 447
BclI TGATCA 4 cut(s) 490, 628, 772, 1621
BcnI CCSGG 2 cut(s) 885, 886
BcoDI GTCTC 7 cut(s) 711, 848, 1054, 1109, 1248, 1721, 1787
BfaI CTAG 6 cut(s) 201, 734, 839, 948, 1262, 1818
BfmI CTRYAG 4 cut(s) 926, 1091, 1418, 1803
BfrI CTTAAG 1 cut(s) 1109
BfuAI ACCTGC 1 cut(s) 1886
BglII AGATCT 1 cut(s) 1681
BisI GCNGC 9 cut(s) 320, 561, 926, 952, 1039, 1141, 1170, 1882, 1916
BlsI GCNGC 9 cut(s) 321, 562, 927, 953, 1040, 1142, 1171, 1883, 1917
Bme1390I CCNGG 5 cut(s) 122, 252, 447, 885, 886
Bme18I GGWCC 3 cut(s) 163, 567, 1333
BmeT110I CYCGRG 3 cut(s) 171, 884, 1322
BmgBI CACGTC 1 cut(s) 1212
BmgT120I GGNCC 5 cut(s) 12, 163, 567, 1333, 1956
BmiI GGNNCC 6 cut(s) 13, 164, 165, 1426, 1787, 1872
BmrFI CCNGG 5 cut(s) 122, 252, 447, 885, 886
BpiI GAAGAC 1 cut(s) 1731
BpuEI CTTGAG 3 cut(s) 743, 1249, 1420
BpuMI CCSGG 2 cut(s) 885, 886
BsaAI YACGTR 1 cut(s) 743
BsaI GGTCTC 4 cut(s) 711, 848, 1721, 1787
BsaJI CCNNGG 4 cut(s) 121, 884, 1141, 1743
Bsc4I CCNNNNNNNGG 4 cut(s) 127, 588, 1712, 1837
Bse1I ACTGG 4 cut(s) 418, 570, 945, 1735
Bse3DI GCAATG 1 cut(s) 1772
BseBI CCWGG 3 cut(s) 122, 252, 447
BseDI CCNNGG 4 cut(s) 121, 884, 1141, 1743
BseGI GGATG 3 cut(s) 220, 528, 601
BseLI CCNNNNNNNGG 4 cut(s) 127, 588, 1712, 1837
BseMI GCAATG 1 cut(s) 1772
BseNI ACTGG 4 cut(s) 418, 570, 945, 1735
BseRI GAGGAG 1 cut(s) 1310
BseXI GCAGC 7 cut(s) 331, 547, 912, 938, 1025, 1156, 1868
BseYI CCCAGC 1 cut(s) 8
BsgI GTGCAG 1 cut(s) 1867
Bsh1236I CGCG 2 cut(s) 787, 1143
BshFI GGCC 6 cut(s) 14, 49, 120, 1311, 1517, 1958
BshNI GGYRCC 1 cut(s) 1785
BsiHKCI CYCGRG 3 cut(s) 171, 884, 1322
BsiSI CCGG 1 cut(s) 885
BslFI GGGAC 1 cut(s) 176
BslI CCNNNNNNNGG 4 cut(s) 127, 588, 1712, 1837
BsmAI GTCTC 7 cut(s) 711, 848, 1054, 1109, 1248, 1721, 1787
BsmFI GGGAC 1 cut(s) 176
BsmI GAATGC 1 cut(s) 895
BsnI GGCC 6 cut(s) 14, 49, 120, 1311, 1517, 1958
Bso31I GGTCTC 4 cut(s) 711, 848, 1721, 1787
BsoBI CYCGRG 3 cut(s) 171, 884, 1322
Bsp1407I TGTACA 1 cut(s) 548
BspACI CCGC 8 cut(s) 86, 991, 1141, 1143, 1600, 1651, 1915, 1954
BspANI GGCC 6 cut(s) 14, 49, 120, 1311, 1517, 1958
BspFNI CGCG 2 cut(s) 787, 1143
BspLI GGNNCC 6 cut(s) 13, 164, 165, 1426, 1787, 1872
BspMAI CTGCAG 2 cut(s) 930, 1095
BspMI ACCTGC 1 cut(s) 1886
BspPI GGATC 3 cut(s) 382, 1865, 1878
BspT107I GGYRCC 1 cut(s) 1785
BspTI CTTAAG 1 cut(s) 1109
BspTNI GGTCTC 4 cut(s) 711, 848, 1721, 1787
BsrDI GCAATG 1 cut(s) 1772
BsrGI TGTACA 1 cut(s) 548
BsrI ACTGG 4 cut(s) 418, 570, 945, 1735
BssECI CCNNGG 4 cut(s) 121, 884, 1141, 1743
BssNAI GTATAC 2 cut(s) 740, 1132
Bst1107I GTATAC 2 cut(s) 740, 1132
Bst2UI CCWGG 3 cut(s) 122, 252, 447
Bst4CI ACNGT 3 cut(s) 223, 801, 1769
Bst6I CTCTTC 3 cut(s) 157, 179, 714
BstAFI CTTAAG 1 cut(s) 1109
BstAPI GCANNNNNTGC 1 cut(s) 1215
BstAUI TGTACA 1 cut(s) 548
BstBAI YACGTR 1 cut(s) 743
BstC8I GCNNGC 1 cut(s) 1956
BstDEI CTNAG 3 cut(s) 431, 1337, 1685
BstDSI CCRYGG 2 cut(s) 1141, 1743
BstF5I GGATG 3 cut(s) 220, 528, 601
BstFNI CGCG 2 cut(s) 787, 1143
BstHHI GCGC 2 cut(s) 787, 956
BstMAI GTCTC 7 cut(s) 711, 848, 1054, 1109, 1248, 1721, 1787
BstMWI GCNNNNNNNGC 6 cut(s) 201, 316, 988, 1215, 1783, 1971
BstNI CCWGG 3 cut(s) 122, 252, 447
BstNSI RCATGY 1 cut(s) 199
BstSCI CCNGG 5 cut(s) 120, 250, 445, 883, 884
BstSFI CTRYAG 4 cut(s) 926, 1091, 1418, 1803
BstSNI TACGTA 1 cut(s) 743
BstUI CGCG 2 cut(s) 787, 1143
BstV1I GCAGC 7 cut(s) 331, 547, 912, 938, 1025, 1156, 1868
BstV2I GAAGAC 1 cut(s) 1731
BstX2I RGATCY 3 cut(s) 374, 1681, 1870
BstYI RGATCY 3 cut(s) 374, 1681, 1870
BstZ17I GTATAC 2 cut(s) 740, 1132
BsuRI GGCC 6 cut(s) 14, 49, 120, 1311, 1517, 1958
BtgI CCRYGG 2 cut(s) 1141, 1743
BtrI CACGTC 1 cut(s) 1212
BtsCI GGATG 3 cut(s) 220, 528, 601
BtsI GCAGTG 3 cut(s) 26, 1135, 1828
BtsIMutI CAGTG 6 cut(s) 26, 486, 577, 806, 1135, 1828
BveI ACCTGC 1 cut(s) 1886
Cac8I GCNNGC 1 cut(s) 1956
CfoI GCGC 2 cut(s) 787, 956
Cfr13I GGNCC 5 cut(s) 12, 163, 567, 1333, 1956
Cfr42I CCGCGG 1 cut(s) 1144
Cfr9I CCCGGG 1 cut(s) 884
CsiI ACCWGGT 1 cut(s) 445
Csp6I GTAC 4 cut(s) 549, 1749, 1841, 2017
CspCI CAANNNNNGTGG 2 cut(s) 13, 48
CviAII CATG 6 cut(s) 18, 181, 196, 848, 1844, 1855
CviQI GTAC 4 cut(s) 549, 1749, 1841, 2017
DdeI CTNAG 3 cut(s) 431, 1337, 1685
DraI TTTAAA 1 cut(s) 1591
EaeI YGGCCR 1 cut(s) 118
Eam1104I CTCTTC 3 cut(s) 157, 179, 714
EarI CTCTTC 3 cut(s) 157, 179, 714
Eco105I TACGTA 1 cut(s) 743
Eco31I GGTCTC 4 cut(s) 711, 848, 1721, 1787
Eco47I GGWCC 3 cut(s) 163, 567, 1333
Eco57I CTGAAG 5 cut(s) 695, 885, 1163, 1169, 1773
Eco88I CYCGRG 3 cut(s) 171, 884, 1322
EcoO109I RGGNCCY 2 cut(s) 12, 163
EcoRI GAATTC 1 cut(s) 1826
EcoRII CCWGG 3 cut(s) 120, 250, 445
EcoT22I ATGCAT 1 cut(s) 359
FaeI CATG 6 cut(s) 21, 184, 199, 851, 1847, 1858
FaqI GGGAC 1 cut(s) 176
FatI CATG 6 cut(s) 17, 180, 195, 847, 1843, 1854
FauI CCCGC 3 cut(s) 984, 1593, 1947
FbaI TGATCA 4 cut(s) 490, 628, 772, 1621
FblI GTMKAC 2 cut(s) 739, 1131
Fnu4HI GCNGC 9 cut(s) 320, 561, 926, 952, 1039, 1141, 1170, 1882, 1916
FokI GGATG 3 cut(s) 227, 515, 608
Fsp4HI GCNGC 9 cut(s) 320, 561, 926, 952, 1039, 1141, 1170, 1882, 1916
FspBI CTAG 6 cut(s) 201, 734, 839, 948, 1262, 1818
GlaI GCGC 2 cut(s) 786, 955
GluI GCNGC 9 cut(s) 320, 561, 926, 952, 1039, 1141, 1170, 1882, 1916
GsaI CCCAGC 1 cut(s) 12
HaeIII GGCC 6 cut(s) 14, 49, 120, 1311, 1517, 1958
HapII CCGG 1 cut(s) 885
HhaI GCGC 2 cut(s) 787, 956
Hin1II CATG 6 cut(s) 21, 184, 199, 851, 1847, 1858
Hin6I GCGC 2 cut(s) 785, 954
HinP1I GCGC 2 cut(s) 785, 954
HindIII AAGCTT 5 cut(s) 428, 962, 1112, 1520, 2060
HinfI GANTC 9 cut(s) 281, 482, 512, 1017, 1062, 1204, 1241, 1414, 1495
HpaII CCGG 1 cut(s) 885
HphI GGTGA 1 cut(s) 1481
Hpy166II GTNNAC 9 cut(s) 486, 603, 740, 853, 874, 938, 1132, 1298, 1945
Hpy188I TCNGA 9 cut(s) 340, 567, 645, 714, 904, 1182, 1248, 1494, 2056
Hpy188III TCNNGA 9 cut(s) 97, 173, 378, 662, 776, 1228, 1295, 1324, 1399
Hpy8I GTNNAC 9 cut(s) 486, 603, 740, 853, 874, 938, 1132, 1298, 1945
HpyAV CCTTC 4 cut(s) 1187, 1322, 1504, 1861
HpyCH4III ACNGT 3 cut(s) 223, 801, 1769
HpyCH4IV ACGT 4 cut(s) 303, 742, 1069, 1211
HpyF10VI GCNNNNNNNGC 6 cut(s) 201, 316, 988, 1215, 1783, 1971
HpyF3I CTNAG 3 cut(s) 431, 1337, 1685
HpySE526I ACGT 4 cut(s) 303, 742, 1069, 1211
Hsp92II CATG 6 cut(s) 21, 184, 199, 851, 1847, 1858
HspAI GCGC 2 cut(s) 785, 954
KflI GGGWCCC 1 cut(s) 163
Ksp22I TGATCA 4 cut(s) 490, 628, 772, 1621
KspI CCGCGG 1 cut(s) 1144
LmnI GCTCC 2 cut(s) 26, 1424
Lsp1109I GCAGC 7 cut(s) 331, 547, 912, 938, 1025, 1156, 1868
MabI ACCWGGT 1 cut(s) 445
MaeI CTAG 6 cut(s) 201, 734, 839, 948, 1262, 1818
MaeII ACGT 4 cut(s) 303, 742, 1069, 1211
MfeI CAATTG 3 cut(s) 114, 503, 1368
MflI RGATCY 3 cut(s) 374, 1681, 1870
MlsI TGGCCA 1 cut(s) 120
MluNI TGGCCA 1 cut(s) 120
MlyI GAGTC 3 cut(s) 491, 1056, 1250
MmeI TCCRAC 3 cut(s) 787, 1898, 2030
Mox20I TGGCCA 1 cut(s) 120
Mph1103I ATGCAT 1 cut(s) 359
MscI TGGCCA 1 cut(s) 120
MseI TTAA 8 cut(s) 687, 920, 1046, 1110, 1164, 1590, 1763, 2042
Msp20I TGGCCA 1 cut(s) 120
MspA1I CMGCKG 2 cut(s) 1038, 1143
MspCI CTTAAG 1 cut(s) 1109
MspI CCGG 1 cut(s) 885
MspR9I CCNGG 5 cut(s) 122, 252, 447, 885, 886
MunI CAATTG 3 cut(s) 114, 503, 1368
Mva1269I GAATGC 1 cut(s) 895
MvaI CCWGG 3 cut(s) 122, 252, 447
MvnI CGCG 2 cut(s) 787, 1143
MwoI GCNNNNNNNGC 6 cut(s) 201, 316, 988, 1215, 1783, 1971
NciI CCSGG 2 cut(s) 885, 886
NlaIII CATG 6 cut(s) 21, 184, 199, 851, 1847, 1858
NlaIV GGNNCC 6 cut(s) 13, 164, 165, 1426, 1787, 1872
NmeAIII GCCGAG 1 cut(s) 1453
NsiI ATGCAT 1 cut(s) 359
NspI RCATGY 1 cut(s) 199
PaeR7I CTCGAG 2 cut(s) 171, 1322
PcsI WCGNNNNNNNCGW 1 cut(s) 385
PctI GAATGC 1 cut(s) 895
PfeI GAWTC 6 cut(s) 281, 512, 1017, 1204, 1414, 1495
PflMI CCANNNNNTGG 1 cut(s) 588
PkrI GCNGC 9 cut(s) 321, 562, 927, 953, 1040, 1142, 1171, 1883, 1917
PleI GAGTC 3 cut(s) 490, 1056, 1249
PpsI GAGTC 3 cut(s) 490, 1056, 1249
Ppu21I YACGTR 1 cut(s) 743
PpuMI RGGWCCY 1 cut(s) 163
Psp1406I AACGTT 1 cut(s) 303
Psp5II RGGWCCY 1 cut(s) 163
Psp6I CCWGG 3 cut(s) 120, 250, 445
PspFI CCCAGC 1 cut(s) 8
PspGI CCWGG 3 cut(s) 120, 250, 445
PspN4I GGNNCC 6 cut(s) 13, 164, 165, 1426, 1787, 1872
PspPI GGNCC 5 cut(s) 12, 163, 567, 1333, 1956
PspPPI RGGWCCY 1 cut(s) 163
PstI CTGCAG 2 cut(s) 930, 1095
PsuI RGATCY 3 cut(s) 374, 1681, 1870
PvuII CAGCTG 1 cut(s) 1038
RsaI GTAC 4 cut(s) 550, 1750, 1842, 2018
RsaNI GTAC 4 cut(s) 549, 1749, 1841, 2017
SacII CCGCGG 1 cut(s) 1144
SaqAI TTAA 8 cut(s) 687, 920, 1046, 1110, 1164, 1590, 1763, 2042
SatI GCNGC 9 cut(s) 320, 561, 926, 952, 1039, 1141, 1170, 1882, 1916
Sau96I GGNCC 5 cut(s) 12, 163, 567, 1333, 1956
SchI GAGTC 3 cut(s) 491, 1056, 1250
ScrFI CCNGG 5 cut(s) 122, 252, 447, 885, 886
SexAI ACCWGGT 1 cut(s) 445
SfcI CTRYAG 4 cut(s) 926, 1091, 1418, 1803
Sfr274I CTCGAG 2 cut(s) 171, 1322
Sfr303I CCGCGG 1 cut(s) 1144
SgrBI CCGCGG 1 cut(s) 1144
SinI GGWCC 3 cut(s) 163, 567, 1333
SlaI CTCGAG 2 cut(s) 171, 1322
SmaI CCCGGG 1 cut(s) 886
SmlI CTYRAG 6 cut(s) 171, 722, 1109, 1228, 1322, 1399
SmoI CTYRAG 6 cut(s) 171, 722, 1109, 1228, 1322, 1399
SnaBI TACGTA 1 cut(s) 743
SsiI CCGC 8 cut(s) 86, 991, 1141, 1143, 1600, 1651, 1915, 1954
SspI AATATT 2 cut(s) 409, 1363
SspMI CTAG 6 cut(s) 201, 734, 839, 948, 1262, 1818
StyD4I CCNGG 5 cut(s) 120, 250, 445, 883, 884
TaaI ACNGT 3 cut(s) 223, 801, 1769
TaiI ACGT 4 cut(s) 306, 745, 1072, 1214
TaqI TCGA 7 cut(s) 96, 172, 379, 916, 1323, 1381, 1560
TaqII GACCGA 1 cut(s) 693
TatI WGTACW 1 cut(s) 548
TauI GCSGC 2 cut(s) 1143, 1918
TfiI GAWTC 6 cut(s) 281, 512, 1017, 1204, 1414, 1495
Tru1I TTAA 8 cut(s) 687, 920, 1046, 1110, 1164, 1590, 1763, 2042
Tru9I TTAA 8 cut(s) 687, 920, 1046, 1110, 1164, 1590, 1763, 2042
TscAI CASTG 6 cut(s) 33, 493, 577, 806, 1142, 1828
TseI GCWGC 7 cut(s) 319, 560, 925, 951, 1038, 1169, 1881
TspDTI ATGAA 6 cut(s) 197, 231, 512, 1023, 1443, 1761
TspGWI ACGGA 1 cut(s) 1732
TspMI CCCGGG 1 cut(s) 884
TspRI CASTG 6 cut(s) 33, 493, 577, 806, 1142, 1828
Van91I CCANNNNNTGG 1 cut(s) 588
Vha464I CTTAAG 1 cut(s) 1109
VpaK11BI GGWCC 3 cut(s) 163, 567, 1333
XapI RAATTY 5 cut(s) 334, 746, 1556, 1692, 1826
XceI RCATGY 1 cut(s) 199
XhoI CTCGAG 2 cut(s) 171, 1322
XmaI CCCGGG 1 cut(s) 884
XmiI GTMKAC 2 cut(s) 739, 1131
XspI CTAG 6 cut(s) 201, 734, 839, 948, 1262, 1818
Zsp2I ATGCAT 1 cut(s) 359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.