Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0012169

Physical Location & Seq

Genomic Coordinates Forward (+)

74851601 .. 74854436

Gene Structure 2836 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ52730

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGTCTGCTTTCATGATGAGCATCACTCCAGGTATACCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCACCATCACACATAGTGACTTCTTCACCACCGCCGACGTCACTTCCCGTCCGTACGATCCCGGGGGCGTACGGCCTTCCGTTGCTGGGCCCCATCTCCGACCGGCTGGACTACTTCTGGTTCCAGGGACCGGAGACGTTCTTCAAGAAAAGAACGGACAAGTACAAGAGTACGGTGTTCCGGACCAATGTCCCTCCGAGTTTCCCGCTGTTCTTGGGTGTTAACCCCAACGTTGTGGCCGTGCTGGACTGCAAGTCGTTCTCGTATCTCTTCGACATGGACGTCGTCGAGAAGAAGAACTGTCTGGTCGGCGACTTCATGCCCAGTGTTAAGTTCACCGGTGACCTCAGGACCTGTGCTTACCTTGATACTTCTGAACCTCAACACGCCCAGATCAAGAGCTTTGCCATGGACATCTTGAAACAAAGCTCCAAGATATGGGTAACTGAGCTCACTGCCAACCTTTCCACATTTTGGGACACGATAGATGCAGATGTTGCAAAGGATGGAAAGGCTAGCTATTTGATCCCACTCCAGAAGTCCTTCTTCAATTTCCTCACAAAATGCTTAGTTGGAGCTGACGCTTCGAACTCGCCCAAAATAGCCGAGTCTGGCTACGCTATGCTCGACCGCTGGCTCGCCCTCCAGCTCCTCCCCACTGTGAAGATCGGTGTGCTTCAGCCTCTCGAGGAGATTTTCCTCCATTCCTTTGCATACCCATCTTTTCTTGTGAGTGGAGACTACAAAAAGGTTTACCAGTTTATAGAAGAATATGGTAAAGAAGTAGTAAACAGAGGTCAAACCGAGTTCGGACTCAGTAAAGAAGAAGCTATTCACAACCTTCTGTTTGTGCTTGGCTTCAACGCATTTGGTGGGTTCTCAGTGTTTCTTCCGAGTTTAGTAAGCGCAATAGCCAGTGACACCACTGGTTTACAACAAAGACTAGTCAAAGAAGTCAGGGAAAATGCCGGTTCAACTCTGAGTTTTGAATCGGTGAAAGACTTGCAACTCGTTCAGTCTGTGGTGTATGAAACACTCCGGCTCAACCCCCCAGTTCCTCTCCAATTCGCCCGGGCCAGAAAGGACTTCCAACTCAGTTCGCATGACTCGGCCTTTGAGATCAAGAAGGGGGAGTTGCTTTGTGGGTTTCAAACACAGGTCATGAGGGACGGGAAGATCTTTGATGATCCGGAGACTTTTAAACCGGACCGGTTCCTGGAAAACAAAGAGTTACAGAATTATTTGTACTGGTCCAACGGACCGCAAACTGGTTCACCCAGCGCCTCAAACAAACAGTGCCCGGGCAAGGACACAGTGACCCTCACTGCTTGTTTGTTCGTTGCTTATACATTTCAAAGATATGACTCAATCACCGGGACTTCTTCCTCTATTACAGCCGTTGAGAAGGCCAAGCAGGAAGCAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0008150 GO:0008152 GO:0008202 GO:0009507 GO:0009526 GO:0009536 GO:0009611 GO:0009941 GO:0009987 GO:0016125 GO:0016491 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00592 ko01110 map00592 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

498

Amino Acids

55.2

Weight (kDa)

6.06

Isoelectric Point (pI)

45.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	334 - 436	4.6e-17	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0012169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15440
fragaria_vesca	FvH4_6g42740
malus_domestica	MD09G1071400.v1.1 MD17G1100800.v1.1
prunus_persica	Prupe.3G213800_v2.0.a1
pyrus_communis	pycom09g03470 pycom17g09550
rosa_chinensis	RchiOBHm_Chr2g0158631
rosa_laevigata	RLG00000021101
rosa_multiflora	Rmu_co8067608.1_g000001 Rmu_sc0004188.1_g000015 Rmu_sc0034116.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091160
rosa_rugosa	Rorug02G0471000
rosa_samantha	Rh2AG536700 Rh2BG549900 Rh2CG520400 Rh2DG559500
rosa_wichuraiana	Rw2G044430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	350
AatII	GACGTC	2 cut(s)	110, 354
AccB7I	CCANNNNNTGG	2 cut(s)	507, 543
AccI	GTMKAC	1 cut(s)	34
AccIII	TCCGGA	2 cut(s)	249, 1258
AciI	CCGC	4 cut(s)	101, 275, 700, 1331
AclI	AACGTT	1 cut(s)	300
AclWI	GGATC	3 cut(s)	121, 589, 1250
AcoI	YGGCCR	1 cut(s)	306
AcuI	CTGAAG	1 cut(s)	731
AcyI	GRCGYC	2 cut(s)	107, 351
AdeI	CACNNNGTG	1 cut(s)	85
AfaI	GTAC	5 cut(s)	124, 140, 233, 241, 1316
AfiI	CCNNNNNNNGG	7 cut(s)	155, 199, 507, 543, 1285, 1337, 1375
AgeI	ACCGGT	2 cut(s)	407, 1278
AgsI	TTSAA	8 cut(s)	214, 490, 619, 931, 1044, 1058, 1220, 1424
AhdI	GACNNNNNGTC	1 cut(s)	322
AhlI	ACTAGT	1 cut(s)	1012
AjnI	CCWGG	3 cut(s)	28, 192, 1284
AluBI	AGCT	7 cut(s)	471, 498, 520, 588, 647, 718, 899
AluI	AGCT	7 cut(s)	471, 498, 520, 588, 647, 718, 899
Alw21I	GWGCWC	1 cut(s)	522
Alw26I	GTCTC	3 cut(s)	197, 801, 1256
AlwI	GGATC	3 cut(s)	121, 589, 1250
AlwNI	CAGNNNCTG	1 cut(s)	423
Ama87I	CYCGRG	4 cut(s)	130, 755, 1140, 1369
Aor13HI	TCCGGA	2 cut(s)	249, 1258
AoxI	GGCC	6 cut(s)	142, 157, 306, 1143, 1179, 1476
ApaI	GGGCCC	1 cut(s)	161
ApeKI	GCWGC	1 cut(s)	1490
ArsI	GACNNNNNNTTYG	2 cut(s)	1166, 1198
AsiGI	ACCGGT	2 cut(s)	407, 1278
Asp700I	GAANNNNTTC	2 cut(s)	611, 900
AspLEI	GCGC	2 cut(s)	977, 1352
AspS9I	GGNCC	9 cut(s)	157, 158, 197, 252, 420, 1143, 1276, 1320, 1328
AsuC2I	CCSGG	7 cut(s)	131, 132, 1141, 1142, 1370, 1371, 1444
AsuHPI	GGTGA	7 cut(s)	63, 87, 397, 422, 1075, 1335, 1432
AsuII	TTCGAA	1 cut(s)	656
AsuNHI	GCTAGC	1 cut(s)	584
AvaI	CYCGRG	4 cut(s)	130, 755, 1140, 1369
AvaII	GGWCC	6 cut(s)	197, 252, 420, 1276, 1320, 1328
AxyI	CCTNAGG	1 cut(s)	416
BaeGI	GKGCMC	2 cut(s)	161, 1370
BanII	GRGCYC	2 cut(s)	161, 522
BarI	GAAGNNNNNNTAC	2 cut(s)	25, 57
Bbv12I	GWGCWC	1 cut(s)	522
BccI	CCATC	4 cut(s)	82, 170, 569, 796
BceAI	ACGGC	3 cut(s)	157, 293, 1451
BciT130I	CCWGG	3 cut(s)	30, 194, 1286
BcnI	CCSGG	7 cut(s)	131, 132, 1141, 1142, 1370, 1371, 1444
BcoDI	GTCTC	3 cut(s)	197, 801, 1256
BcuI	ACTAGT	1 cut(s)	1012
BfaI	CTAG	2 cut(s)	585, 1013
BfoI	RGCGCY	1 cut(s)	1353
BglII	AGATCT	1 cut(s)	1245
BisI	GCNGC	1 cut(s)	1491
BlsI	GCNGC	1 cut(s)	1492
Bme18I	GGWCC	6 cut(s)	197, 252, 420, 1276, 1320, 1328
BmeRI	GACNNNNNGTC	1 cut(s)	322
BmeT110I	CYCGRG	4 cut(s)	130, 755, 1140, 1369
BmgT120I	GGNCC	9 cut(s)	157, 158, 197, 252, 420, 1143, 1276, 1320, 1328
BmiI	GGNNCC	5 cut(s)	159, 160, 191, 198, 1283
BmrI	ACTGGG	2 cut(s)	387, 1115
BmsI	GCATC	2 cut(s)	30, 547
BmtI	GCTAGC	1 cut(s)	588
BmuI	ACTGGG	2 cut(s)	387, 1115
BoxI	GACNNNNGTC	1 cut(s)	257
BplI	GAGNNNNNCTC	2 cut(s)	10, 42
BpmI	CTGGAG	3 cut(s)	12, 587, 698
Bpu14I	TTCGAA	1 cut(s)	656
BpuMI	CCSGG	7 cut(s)	131, 132, 1141, 1142, 1370, 1371, 1444
BsaBI	GATNNNNATC	1 cut(s)	20
BsaHI	GRCGYC	2 cut(s)	107, 351
BsaJI	CCNNGG	6 cut(s)	130, 131, 193, 477, 1140, 1369
BsaWI	WCCGGW	6 cut(s)	199, 249, 407, 1258, 1273, 1278
Bsc4I	CCNNNNNNNGG	7 cut(s)	155, 199, 507, 543, 1285, 1337, 1375
Bse118I	RCCGGY	4 cut(s)	171, 407, 1037, 1278
Bse1I	ACTGG	7 cut(s)	393, 826, 984, 1000, 1121, 1322, 1342
Bse21I	CCTNAGG	1 cut(s)	416
Bse8I	GATNNNNATC	1 cut(s)	20
BseAI	TCCGGA	2 cut(s)	249, 1258
BseBI	CCWGG	3 cut(s)	30, 194, 1286
BseDI	CCNNGG	6 cut(s)	130, 131, 193, 477, 1140, 1369
BseGI	GGATG	1 cut(s)	580
BseJI	GATNNNNATC	1 cut(s)	20
BseLI	CCNNNNNNNGG	7 cut(s)	155, 199, 507, 543, 1285, 1337, 1375
BseMII	CTCAG	6 cut(s)	430, 507, 898, 963, 1040, 1177
BseNI	ACTGG	7 cut(s)	393, 826, 984, 1000, 1121, 1322, 1342
BseRI	GAGGAG	2 cut(s)	710, 773
BseSI	GKGCMC	2 cut(s)	161, 1370
BseYI	CCCAGC	2 cut(s)	154, 1346
Bsh1285I	CGRYCG	2 cut(s)	172, 700
BshFI	GGCC	6 cut(s)	144, 159, 308, 1145, 1181, 1478
BshTI	ACCGGT	2 cut(s)	407, 1278
BsiEI	CGRYCG	2 cut(s)	172, 700
BsiHKAI	GWGCWC	1 cut(s)	522
BsiHKCI	CYCGRG	4 cut(s)	130, 755, 1140, 1369
BsiWI	CGTACG	2 cut(s)	122, 138
BslFI	GGGAC	5 cut(s)	210, 245, 560, 1250, 1459
BslI	CCNNNNNNNGG	7 cut(s)	155, 199, 507, 543, 1285, 1337, 1375
BsmAI	GTCTC	3 cut(s)	197, 801, 1256
BsmBI	CGTCTC	1 cut(s)	197
BsmFI	GGGAC	5 cut(s)	210, 245, 560, 1250, 1459
BsnI	GGCC	6 cut(s)	144, 159, 308, 1145, 1181, 1478
BsoBI	CYCGRG	4 cut(s)	130, 755, 1140, 1369
Bsp119I	TTCGAA	1 cut(s)	656
Bsp120I	GGGCCC	1 cut(s)	157
Bsp1286I	GDGCHC	3 cut(s)	161, 522, 1370
Bsp13I	TCCGGA	2 cut(s)	249, 1258
Bsp143I	GATC	7 cut(s)	126, 462, 594, 735, 1188, 1245, 1255
Bsp19I	CCATGG	1 cut(s)	477
BspACI	CCGC	4 cut(s)	101, 275, 700, 1331
BspANI	GGCC	6 cut(s)	144, 159, 308, 1145, 1181, 1478
BspCNI	CTCAG	6 cut(s)	429, 508, 897, 962, 1041, 1176
BspEI	TCCGGA	2 cut(s)	249, 1258
BspHI	TCATGA	2 cut(s)	12, 1230
BspLI	GGNNCC	5 cut(s)	159, 160, 191, 198, 1283
BspOI	GCTAGC	1 cut(s)	588
BspPI	GGATC	3 cut(s)	121, 589, 1250
BspT104I	TTCGAA	1 cut(s)	656
BsrFI	RCCGGY	4 cut(s)	171, 407, 1037, 1278
BsrI	ACTGG	7 cut(s)	393, 826, 984, 1000, 1121, 1322, 1342
BssAI	RCCGGY	4 cut(s)	171, 407, 1037, 1278
BssECI	CCNNGG	6 cut(s)	130, 131, 193, 477, 1140, 1369
BssMI	GATC	7 cut(s)	126, 462, 594, 735, 1188, 1245, 1255
BssNAI	GTATAC	1 cut(s)	35
BssNI	GRCGYC	2 cut(s)	107, 351
BssT1I	CCWWGG	1 cut(s)	477
Bst1107I	GTATAC	1 cut(s)	35
Bst2UI	CCWGG	3 cut(s)	30, 194, 1286
Bst4CI	ACNGT	5 cut(s)	244, 371, 730, 1365, 1384
Bst6I	CTCTTC	2 cut(s)	46, 344
BstACI	GRCGYC	2 cut(s)	107, 351
BstAPI	GCANNNNNTGC	1 cut(s)	566
BstBI	TTCGAA	1 cut(s)	656
BstC8I	GCNNGC	3 cut(s)	586, 704, 708
BstDEI	CTNAG	7 cut(s)	416, 516, 637, 884, 949, 1049, 1163
BstDSI	CCRYGG	1 cut(s)	477
BstEII	GGTNACC	1 cut(s)	410
BstF5I	GGATG	1 cut(s)	580
BstH2I	RGCGCY	1 cut(s)	1353
BstHHI	GCGC	2 cut(s)	977, 1352
BstKTI	GATC	7 cut(s)	129, 465, 597, 738, 1191, 1248, 1258
BstMAI	GTCTC	3 cut(s)	197, 801, 1256
BstMBI	GATC	7 cut(s)	126, 462, 594, 735, 1188, 1245, 1255
BstMCI	CGRYCG	2 cut(s)	172, 700
BstMWI	GCNNNNNNNGC	1 cut(s)	566
BstNI	CCWGG	3 cut(s)	30, 194, 1286
BstPAI	GACNNNNGTC	1 cut(s)	257
BstPI	GGTNACC	1 cut(s)	410
BstSLI	GKGCMC	2 cut(s)	161, 1370
BstX2I	RGATCY	1 cut(s)	1245
BstXI	CCANNNNNNTGG	1 cut(s)	304
BstYI	RGATCY	1 cut(s)	1245
BstZ17I	GTATAC	1 cut(s)	35
Bsu36I	CCTNAGG	1 cut(s)	416
BsuRI	GGCC	6 cut(s)	144, 159, 308, 1145, 1181, 1478
BtgI	CCRYGG	1 cut(s)	477
BtsCI	GGATG	1 cut(s)	580
BtsI	GCAGTG	2 cut(s)	522, 1392
BtsIMutI	CAGTG	9 cut(s)	400, 522, 726, 957, 991, 993, 1370, 1389, 1392
Cac8I	GCNNGC	3 cut(s)	586, 704, 708
CaiI	CAGNNNCTG	1 cut(s)	423
CciI	TCATGA	2 cut(s)	12, 1230
CfoI	GCGC	2 cut(s)	977, 1352
Cfr10I	RCCGGY	4 cut(s)	171, 407, 1037, 1278
Cfr13I	GGNCC	9 cut(s)	157, 158, 197, 252, 420, 1143, 1276, 1320, 1328
Cfr9I	CCCGGG	3 cut(s)	130, 1140, 1369
CpoI	CGGWCCG	2 cut(s)	1276, 1328
CseI	GACGC	1 cut(s)	659
Csp6I	GTAC	5 cut(s)	123, 139, 232, 240, 1315
CspAI	ACCGGT	2 cut(s)	407, 1278
CspI	CGGWCCG	2 cut(s)	1276, 1328
CviAII	CATG	7 cut(s)	13, 346, 388, 478, 1172, 1231, 1494
CviQI	GTAC	5 cut(s)	123, 139, 232, 240, 1315
DdeI	CTNAG	7 cut(s)	416, 516, 637, 884, 949, 1049, 1163
DpnI	GATC	7 cut(s)	128, 464, 596, 737, 1190, 1247, 1257
DpnII	GATC	7 cut(s)	126, 462, 594, 735, 1188, 1245, 1255
DraI	TTTAAA	1 cut(s)	1270
DraIII	CACNNNGTG	1 cut(s)	85
DrdI	GACNNNNNNGTC	1 cut(s)	350
DriI	GACNNNNNGTC	1 cut(s)	322
DseDI	GACNNNNNNGTC	1 cut(s)	350
EaeI	YGGCCR	1 cut(s)	306
Eam1104I	CTCTTC	2 cut(s)	46, 344
Eam1105I	GACNNNNNGTC	1 cut(s)	322
EarI	CTCTTC	2 cut(s)	46, 344
Ecl136II	GAGCTC	1 cut(s)	520
Eco130I	CCWWGG	1 cut(s)	477
Eco24I	GRGCYC	2 cut(s)	161, 522
Eco47I	GGWCC	6 cut(s)	197, 252, 420, 1276, 1320, 1328
Eco53kI	GAGCTC	1 cut(s)	520
Eco57I	CTGAAG	1 cut(s)	731
Eco81I	CCTNAGG	1 cut(s)	416
Eco88I	CYCGRG	4 cut(s)	130, 755, 1140, 1369
Eco91I	GGTNACC	1 cut(s)	410
EcoICRI	GAGCTC	1 cut(s)	520
EcoO109I	RGGNCCY	2 cut(s)	158, 420
EcoO65I	GGTNACC	1 cut(s)	410
EcoRII	CCWGG	3 cut(s)	28, 192, 1284
EcoT14I	CCWWGG	1 cut(s)	477
EcoT38I	GRGCYC	2 cut(s)	161, 522
ErhI	CCWWGG	1 cut(s)	477
Esp3I	CGTCTC	1 cut(s)	197
FaeI	CATG	7 cut(s)	16, 349, 391, 481, 1175, 1234, 1497
FalI	AAGNNNNNCTT	2 cut(s)	599, 631
FaqI	GGGAC	5 cut(s)	210, 245, 560, 1250, 1459
FatI	CATG	7 cut(s)	12, 345, 387, 477, 1171, 1230, 1493
FauI	CCCGC	1 cut(s)	282
FblI	GTMKAC	1 cut(s)	34
Fnu4HI	GCNGC	1 cut(s)	1491
FokI	GGATG	1 cut(s)	587
FriOI	GRGCYC	2 cut(s)	161, 522
Fsp4HI	GCNGC	1 cut(s)	1491
FspBI	CTAG	2 cut(s)	585, 1013
GlaI	GCGC	2 cut(s)	976, 1351
GluI	GCNGC	1 cut(s)	1491
GsaI	CCCAGC	2 cut(s)	158, 1350
GsuI	CTGGAG	3 cut(s)	12, 587, 698
HaeII	RGCGCY	1 cut(s)	1353
HaeIII	GGCC	6 cut(s)	144, 159, 308, 1145, 1181, 1478
HgaI	GACGC	1 cut(s)	659
HhaI	GCGC	2 cut(s)	977, 1352
Hin1I	GRCGYC	2 cut(s)	107, 351
Hin1II	CATG	7 cut(s)	16, 349, 391, 481, 1175, 1234, 1497
Hin6I	GCGC	2 cut(s)	975, 1350
HinP1I	GCGC	2 cut(s)	975, 1350
HincII	GTYRAC	1 cut(s)	292
HindII	GTYRAC	1 cut(s)	292
HinfI	GANTC	5 cut(s)	677, 882, 1058, 1175, 1433
HpaI	GTTAAC	1 cut(s)	292
HphI	GGTGA	7 cut(s)	63, 87, 397, 422, 1075, 1335, 1432
Hpy166II	GTNNAC	7 cut(s)	35, 292, 405, 823, 859, 1001, 1343
Hpy188I	TCNGA	6 cut(s)	169, 267, 445, 881, 963, 1050
Hpy8I	GTNNAC	7 cut(s)	35, 292, 405, 823, 859, 1001, 1343
Hpy99I	CGWCG	3 cut(s)	109, 356, 359
HpyAV	CCTTC	5 cut(s)	155, 622, 920, 1189, 1468
HpyCH4III	ACNGT	5 cut(s)	244, 371, 730, 1365, 1384
HpyCH4IV	ACGT	4 cut(s)	107, 206, 300, 351
HpyCH4V	TGCA	5 cut(s)	321, 560, 569, 782, 1075
HpyF10VI	GCNNNNNNNGC	1 cut(s)	566
HpyF3I	CTNAG	7 cut(s)	416, 516, 637, 884, 949, 1049, 1163
HpySE526I	ACGT	4 cut(s)	107, 206, 300, 351
Hsp92I	GRCGYC	2 cut(s)	107, 351
Hsp92II	CATG	7 cut(s)	16, 349, 391, 481, 1175, 1234, 1497
HspAI	GCGC	2 cut(s)	975, 1350
Kpn2I	TCCGGA	2 cut(s)	249, 1258
KspAI	GTTAAC	1 cut(s)	292
Kzo9I	GATC	7 cut(s)	126, 462, 594, 735, 1188, 1245, 1255
LmnI	GCTCC	3 cut(s)	503, 644, 723
LweI	GCATC	2 cut(s)	30, 547
MaeI	CTAG	2 cut(s)	585, 1013
MaeII	ACGT	4 cut(s)	107, 206, 300, 351
MaeIII	GTNAC	7 cut(s)	85, 108, 410, 511, 986, 1299, 1384
MalI	GATC	7 cut(s)	128, 464, 596, 737, 1190, 1247, 1257
MboI	GATC	7 cut(s)	126, 462, 594, 735, 1188, 1245, 1255
MflI	RGATCY	1 cut(s)	1245
MhlI	GDGCHC	3 cut(s)	161, 522, 1370
MluCI	AATT	3 cut(s)	619, 1133, 1306
MlyI	GAGTC	4 cut(s)	686, 876, 1169, 1427
MmeI	TCCRAC	4 cut(s)	192, 622, 1183, 1347
MroI	TCCGGA	2 cut(s)	249, 1258
MroXI	GAANNNNTTC	2 cut(s)	611, 900
MseI	TTAA	3 cut(s)	291, 399, 1269
MspA1I	CMGCKG	2 cut(s)	277, 702
MvaI	CCWGG	3 cut(s)	30, 194, 1286
MwoI	GCNNNNNNNGC	1 cut(s)	566
NciI	CCSGG	7 cut(s)	131, 132, 1141, 1142, 1370, 1371, 1444
NcoI	CCATGG	1 cut(s)	477
NdeII	GATC	7 cut(s)	126, 462, 594, 735, 1188, 1245, 1255
NheI	GCTAGC	1 cut(s)	584
NlaIII	CATG	7 cut(s)	16, 349, 391, 481, 1175, 1234, 1497
NlaIV	GGNNCC	5 cut(s)	159, 160, 191, 198, 1283
NmeAIII	GCCGAG	2 cut(s)	700, 1157
NmuCI	GTSAC	5 cut(s)	85, 108, 410, 986, 1384
NspV	TTCGAA	1 cut(s)	656
PaeR7I	CTCGAG	1 cut(s)	755
PagI	TCATGA	2 cut(s)	12, 1230
PcsI	WCGNNNNNNNCGW	3 cut(s)	306, 348, 693
PdmI	GAANNNNTTC	2 cut(s)	611, 900
PfeI	GAWTC	1 cut(s)	1058
Pfl23II	CGTACG	2 cut(s)	122, 138
PflFI	GACNNNGTC	1 cut(s)	353
PflMI	CCANNNNNTGG	2 cut(s)	507, 543
PfoI	TCCNGGA	1 cut(s)	1284
PinAI	ACCGGT	2 cut(s)	407, 1278
PkrI	GCNGC	1 cut(s)	1492
PleI	GAGTC	4 cut(s)	685, 876, 1169, 1427
PpsI	GAGTC	4 cut(s)	685, 876, 1169, 1427
PpuMI	RGGWCCY	1 cut(s)	420
PshAI	GACNNNNGTC	1 cut(s)	257
Psp124BI	GAGCTC	1 cut(s)	522
Psp1406I	AACGTT	1 cut(s)	300
Psp5II	RGGWCCY	1 cut(s)	420
Psp6I	CCWGG	3 cut(s)	28, 192, 1284
PspEI	GGTNACC	1 cut(s)	410
PspFI	CCCAGC	2 cut(s)	154, 1346
PspGI	CCWGG	3 cut(s)	28, 192, 1284
PspLI	CGTACG	2 cut(s)	122, 138
PspN4I	GGNNCC	5 cut(s)	159, 160, 191, 198, 1283
PspOMI	GGGCCC	1 cut(s)	157
PspPI	GGNCC	9 cut(s)	157, 158, 197, 252, 420, 1143, 1276, 1320, 1328
PspPPI	RGGWCCY	1 cut(s)	420
PstNI	CAGNNNCTG	1 cut(s)	423
PsuI	RGATCY	1 cut(s)	1245
PsyI	GACNNNGTC	1 cut(s)	353
RsaI	GTAC	5 cut(s)	124, 140, 233, 241, 1316
RsaNI	GTAC	5 cut(s)	123, 139, 232, 240, 1315
Rsr2I	CGGWCCG	2 cut(s)	1276, 1328
RsrII	CGGWCCG	2 cut(s)	1276, 1328
SacI	GAGCTC	1 cut(s)	522
SaqAI	TTAA	3 cut(s)	291, 399, 1269
SatI	GCNGC	1 cut(s)	1491
Sau3AI	GATC	7 cut(s)	126, 462, 594, 735, 1188, 1245, 1255
Sau96I	GGNCC	9 cut(s)	157, 158, 197, 252, 420, 1143, 1276, 1320, 1328
SchI	GAGTC	4 cut(s)	686, 876, 1169, 1427
SduI	GDGCHC	3 cut(s)	161, 522, 1370
SfaNI	GCATC	2 cut(s)	30, 547
Sfr274I	CTCGAG	1 cut(s)	755
SfuI	TTCGAA	1 cut(s)	656
SgrAI	CRCCGGYG	1 cut(s)	407
SinI	GGWCC	6 cut(s)	197, 252, 420, 1276, 1320, 1328
SlaI	CTCGAG	1 cut(s)	755
SmaI	CCCGGG	3 cut(s)	132, 1142, 1371
SmlI	CTYRAG	1 cut(s)	755
SmoI	CTYRAG	1 cut(s)	755
SpeI	ACTAGT	1 cut(s)	1012
SrfI	GCCCGGGC	2 cut(s)	1142, 1371
Sse9I	AATT	3 cut(s)	619, 1133, 1306
SsiI	CCGC	4 cut(s)	101, 275, 700, 1331
SspMI	CTAG	2 cut(s)	585, 1013
SstI	GAGCTC	1 cut(s)	522
StyI	CCWWGG	1 cut(s)	477
TaaI	ACNGT	5 cut(s)	244, 371, 730, 1365, 1384
TaiI	ACGT	4 cut(s)	110, 209, 303, 354
TaqI	TCGA	5 cut(s)	342, 357, 656, 696, 756
TasI	AATT	3 cut(s)	619, 1133, 1306
TatI	WGTACW	2 cut(s)	231, 1314
TfiI	GAWTC	1 cut(s)	1058
Tru1I	TTAA	3 cut(s)	291, 399, 1269
Tru9I	TTAA	3 cut(s)	291, 399, 1269
TscAI	CASTG	9 cut(s)	400, 529, 733, 957, 991, 1000, 1370, 1389, 1399
TseFI	GTSAC	5 cut(s)	85, 108, 410, 986, 1384
TseI	GCWGC	1 cut(s)	1490
Tsp45I	GTSAC	5 cut(s)	85, 108, 410, 986, 1384
TspDTI	ATGAA	2 cut(s)	376, 1113
TspGWI	ACGGA	4 cut(s)	110, 138, 239, 1341
TspMI	CCCGGG	3 cut(s)	130, 1140, 1369
TspRI	CASTG	9 cut(s)	400, 529, 733, 957, 991, 1000, 1370, 1389, 1399
Tth111I	GACNNNGTC	1 cut(s)	353
Van91I	CCANNNNNTGG	2 cut(s)	507, 543
VpaK11BI	GGWCC	6 cut(s)	197, 252, 420, 1276, 1320, 1328
XhoI	CTCGAG	1 cut(s)	755
XmaI	CCCGGG	3 cut(s)	130, 1140, 1369
XmiI	GTMKAC	1 cut(s)	34
XmnI	GAANNNNTTC	2 cut(s)	611, 900
XspI	CTAG	2 cut(s)	585, 1013
ZraI	GACGTC	2 cut(s)	108, 352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.