Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0012169

Physical Location & Seq

Genomic Coordinates Forward (+)

71088745 .. 71090923

Gene Structure 2179 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G044430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGTCTGCTTTCATGATGAGCATCACTCCAGGTATACCCTCTTCTTCTTCTTCACCATCACACGTAGTGACTTCTTCACCACCGCCGACGTCACTTCCCGTCCGTACGATCCCGGGGGCGTACGGCCTTCCGTTGCTGGGCCCCATCTCCGACCGGCTGGACTACTTCTGGTTCCAGGGACCGGAGACGTTCTTCAAGAAAAGAACGGAGAAGTACAAGAGTACGGTGTTCCGGACCAATGTCCCTCCGAGTTTCCCGCTGTTCTTGGGTGTTAACCCCAACGTTGTGGCCGTGCTGGACTGCAAGTCGTTCTCGTATCTCTTCGACATGGACCTCGTCGAGAAGAAGAACTGTCTGGTCGGCGACTTCATGCCCAGCGTTAAGTTCACCGGTGACCTCAGGACCTGTGCTTACCTTGATACTTCTGAACCTCAACACGCCCAGATCAAGAGCTTTGCCATGGACATCTTGAAACAAAGCTCCAAGATATGGGTTACTGAGCTCACTGCCAACCTTTCCACATTTTGGGACACGATAGATGCAGATGTTGCCAAGGATGGAAAGGCTAGCTATTTGATCCCACTCCAGAAGTCCTTCTTCAAGTTCCTCACAAAATGCTTAGTTGGAGCTGACGCTTCGAACTCGCCCAAAATAGCCGAGTCTGGCTACGCTATGGTCGACCGCTGGCTCGCCCTCCAGCTCCTCCCCACTGTGAAGATCGGTGTGCTTCAGCCTCTCGAGGAGGTTTTCCTTCATTCCTTTGCATACCCATCTTTTCTTGTCAGTGGAGACTACAAAAAGCTTTACCAGTTTATAGAAGAATATGGTAAAGAAGTAGTAAACAGAGGTCAAACCGAGTTCGGACTCAGTAAAGAAGAAGCTATTCACAACCTTCTGTTTGTGCTTGGCTTCAACGCATTTGGTGGGTTCTCAGTGTTTCTTCCAAGTTTAGTAAGCGCAATAGCCAGTGACACCACTGGTTTACAACAAAGAATAGTCAAAGAAGTCAGGGAAAATGCCGGTTCAACTCTGAGTTTTGAATCGGTGAAAGACTTGCAACTCGTTCAGTCTGTGGTGTATGAAACACTCCGGTTCAACCCCCCAGTTCCTCTCCAATTCGCCCGGGCCAGAAAGGACTTCCAACTCAGTTCGCATGACTCGGCCTTTGAGATCAAGAAGGGGGAGTTGCTTTGTGGGTTTCAAACACAGGTCATGAGGGACGGGAAGATCTTTGATGATCCGGAGACTTTTAAACCGGACCGGTTCCTGGAAAACAAAGAGTTACAGAATTATTTGTACTGGTCCAACGGACCGCAAACTGGTTCACCCAGCGCCTCAAACAAACAGTGCCCGGGCAAGGACACAGTGACCCTCACTGCTTGTTTGTTCGTTGCTTATACATTTCAAAGATATGACTCAATCACCGGGACTTCTTCCTCTATTACAGCCGTTGAGAAGGCCAAGCAGGAAGCAGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0008150 GO:0008152 GO:0008202 GO:0009507 GO:0009526 GO:0009536 GO:0009611 GO:0009941 GO:0009987 GO:0016125 GO:0016491 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00592 ko01110 map00592 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

492

Amino Acids

54.75

Weight (kDa)

6.28

Isoelectric Point (pI)

42.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	328 - 430	9.6e-17	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0012169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15440
fragaria_vesca	FvH4_6g42740
malus_domestica	MD09G1071400.v1.1 MD17G1100800.v1.1
prunus_persica	Prupe.3G213800_v2.0.a1
pyrus_communis	pycom09g03470 pycom17g09550
rosa_chinensis	RchiOBHm_Chr2g0158631
rosa_laevigata	RLG00000021101
rosa_multiflora	Rmu_co8067608.1_g000001 Rmu_sc0004188.1_g000015 Rmu_sc0034116.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091160
rosa_rugosa	Rorug02G0471000
rosa_samantha	Rh2AG536700 Rh2BG549900 Rh2CG520400 Rh2DG559500
rosa_wichuraiana	Rw2G044430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	92
AccB7I	CCANNNNNTGG	2 cut(s)	489, 525
AccI	GTMKAC	2 cut(s)	34, 678
AccIII	TCCGGA	2 cut(s)	231, 1240
AciI	CCGC	4 cut(s)	83, 257, 682, 1313
AclI	AACGTT	1 cut(s)	282
AclWI	GGATC	3 cut(s)	103, 571, 1232
AcoI	YGGCCR	1 cut(s)	288
AcuI	CTGAAG	1 cut(s)	713
AcyI	GRCGYC	1 cut(s)	89
AdeI	CACNNNGTG	1 cut(s)	67
AfaI	GTAC	5 cut(s)	106, 122, 215, 223, 1298
AfiI	CCNNNNNNNGG	7 cut(s)	137, 181, 489, 525, 1267, 1319, 1357
AflIII	ACRYGT	1 cut(s)	61
AgeI	ACCGGT	2 cut(s)	389, 1260
AgsI	TTSAA	9 cut(s)	196, 472, 601, 913, 1026, 1040, 1096, 1202, 1406
AhdI	GACNNNNNGTC	1 cut(s)	304
AjnI	CCWGG	3 cut(s)	28, 174, 1266
AluBI	AGCT	8 cut(s)	453, 480, 502, 570, 629, 700, 802, 881
AluI	AGCT	8 cut(s)	453, 480, 502, 570, 629, 700, 802, 881
Alw21I	GWGCWC	1 cut(s)	504
Alw26I	GTCTC	3 cut(s)	179, 783, 1238
AlwI	GGATC	3 cut(s)	103, 571, 1232
AlwNI	CAGNNNCTG	1 cut(s)	405
Ama87I	CYCGRG	4 cut(s)	112, 737, 1122, 1351
Aor13HI	TCCGGA	2 cut(s)	231, 1240
AoxI	GGCC	6 cut(s)	124, 139, 288, 1125, 1161, 1458
ApaI	GGGCCC	1 cut(s)	143
ArsI	GACNNNNNNTTYG	2 cut(s)	1148, 1180
AsiGI	ACCGGT	2 cut(s)	389, 1260
Asp700I	GAANNNNTTC	2 cut(s)	593, 882
AspLEI	GCGC	2 cut(s)	959, 1334
AsuC2I	CCSGG	7 cut(s)	113, 114, 1123, 1124, 1352, 1353, 1426
AsuHPI	GGTGA	7 cut(s)	45, 69, 379, 404, 1057, 1317, 1414
AsuII	TTCGAA	1 cut(s)	638
AsuNHI	GCTAGC	1 cut(s)	566
AvaI	CYCGRG	4 cut(s)	112, 737, 1122, 1351
AvaII	GGWCC	7 cut(s)	179, 234, 331, 402, 1258, 1302, 1310
AxyI	CCTNAGG	1 cut(s)	398
BaeGI	GKGCMC	2 cut(s)	143, 1352
BanII	GRGCYC	2 cut(s)	143, 504
BarI	GAAGNNNNNNTAC	2 cut(s)	25, 57
Bbv12I	GWGCWC	1 cut(s)	504
BccI	CCATC	4 cut(s)	64, 152, 551, 778
BceAI	ACGGC	3 cut(s)	139, 275, 1433
BciT130I	CCWGG	3 cut(s)	30, 176, 1268
BcnI	CCSGG	7 cut(s)	113, 114, 1123, 1124, 1352, 1353, 1426
BcoDI	GTCTC	3 cut(s)	179, 783, 1238
BfaI	CTAG	1 cut(s)	567
BfoI	RGCGCY	1 cut(s)	1335
BglII	AGATCT	1 cut(s)	1227
Bme18I	GGWCC	7 cut(s)	179, 234, 331, 402, 1258, 1302, 1310
BmeRI	GACNNNNNGTC	1 cut(s)	304
BmeT110I	CYCGRG	4 cut(s)	112, 737, 1122, 1351
BmiI	GGNNCC	5 cut(s)	141, 142, 173, 180, 1265
BmrI	ACTGGG	1 cut(s)	1097
BmsI	GCATC	2 cut(s)	30, 529
BmtI	GCTAGC	1 cut(s)	570
BmuI	ACTGGG	1 cut(s)	1097
BoxI	GACNNNNGTC	1 cut(s)	239
BplI	GAGNNNNNCTC	2 cut(s)	10, 42
BpmI	CTGGAG	3 cut(s)	12, 569, 680
Bpu14I	TTCGAA	1 cut(s)	638
BpuMI	CCSGG	7 cut(s)	113, 114, 1123, 1124, 1352, 1353, 1426
BsaAI	YACGTR	1 cut(s)	64
BsaBI	GATNNNNATC	1 cut(s)	20
BsaHI	GRCGYC	1 cut(s)	89
BsaJI	CCNNGG	7 cut(s)	112, 113, 175, 459, 552, 1122, 1351
BsaWI	WCCGGW	7 cut(s)	181, 231, 389, 1089, 1240, 1255, 1260
Bsc4I	CCNNNNNNNGG	7 cut(s)	137, 181, 489, 525, 1267, 1319, 1357
Bse118I	RCCGGY	4 cut(s)	153, 389, 1019, 1260
Bse1I	ACTGG	6 cut(s)	808, 966, 982, 1103, 1304, 1324
Bse21I	CCTNAGG	1 cut(s)	398
Bse8I	GATNNNNATC	1 cut(s)	20
BseAI	TCCGGA	2 cut(s)	231, 1240
BseBI	CCWGG	3 cut(s)	30, 176, 1268
BseDI	CCNNGG	7 cut(s)	112, 113, 175, 459, 552, 1122, 1351
BseGI	GGATG	1 cut(s)	562
BseJI	GATNNNNATC	1 cut(s)	20
BseLI	CCNNNNNNNGG	7 cut(s)	137, 181, 489, 525, 1267, 1319, 1357
BseMII	CTCAG	6 cut(s)	412, 489, 880, 945, 1022, 1159
BseNI	ACTGG	6 cut(s)	808, 966, 982, 1103, 1304, 1324
BseRI	GAGGAG	2 cut(s)	692, 755
BseSI	GKGCMC	2 cut(s)	143, 1352
BseYI	CCCAGC	3 cut(s)	136, 374, 1328
Bsh1285I	CGRYCG	2 cut(s)	154, 682
BshFI	GGCC	6 cut(s)	126, 141, 290, 1127, 1163, 1460
BshTI	ACCGGT	2 cut(s)	389, 1260
BsiEI	CGRYCG	2 cut(s)	154, 682
BsiHKAI	GWGCWC	1 cut(s)	504
BsiHKCI	CYCGRG	4 cut(s)	112, 737, 1122, 1351
BsiWI	CGTACG	2 cut(s)	104, 120
BslFI	GGGAC	5 cut(s)	192, 227, 542, 1232, 1441
BslI	CCNNNNNNNGG	7 cut(s)	137, 181, 489, 525, 1267, 1319, 1357
BsmAI	GTCTC	3 cut(s)	179, 783, 1238
BsmBI	CGTCTC	1 cut(s)	179
BsmFI	GGGAC	5 cut(s)	192, 227, 542, 1232, 1441
BsnI	GGCC	6 cut(s)	126, 141, 290, 1127, 1163, 1460
BsoBI	CYCGRG	4 cut(s)	112, 737, 1122, 1351
Bsp119I	TTCGAA	1 cut(s)	638
Bsp120I	GGGCCC	1 cut(s)	139
Bsp1286I	GDGCHC	3 cut(s)	143, 504, 1352
Bsp13I	TCCGGA	2 cut(s)	231, 1240
Bsp143I	GATC	7 cut(s)	108, 444, 576, 717, 1170, 1227, 1237
Bsp19I	CCATGG	1 cut(s)	459
BspACI	CCGC	4 cut(s)	83, 257, 682, 1313
BspANI	GGCC	6 cut(s)	126, 141, 290, 1127, 1163, 1460
BspCNI	CTCAG	6 cut(s)	411, 490, 879, 944, 1023, 1158
BspEI	TCCGGA	2 cut(s)	231, 1240
BspHI	TCATGA	2 cut(s)	12, 1212
BspLI	GGNNCC	5 cut(s)	141, 142, 173, 180, 1265
BspOI	GCTAGC	1 cut(s)	570
BspPI	GGATC	3 cut(s)	103, 571, 1232
BspT104I	TTCGAA	1 cut(s)	638
BsrFI	RCCGGY	4 cut(s)	153, 389, 1019, 1260
BsrI	ACTGG	6 cut(s)	808, 966, 982, 1103, 1304, 1324
BssAI	RCCGGY	4 cut(s)	153, 389, 1019, 1260
BssECI	CCNNGG	7 cut(s)	112, 113, 175, 459, 552, 1122, 1351
BssMI	GATC	7 cut(s)	108, 444, 576, 717, 1170, 1227, 1237
BssNAI	GTATAC	1 cut(s)	35
BssNI	GRCGYC	1 cut(s)	89
BssT1I	CCWWGG	2 cut(s)	459, 552
Bst1107I	GTATAC	1 cut(s)	35
Bst2UI	CCWGG	3 cut(s)	30, 176, 1268
Bst4CI	ACNGT	5 cut(s)	226, 353, 712, 1347, 1366
Bst6I	CTCTTC	2 cut(s)	46, 326
BstACI	GRCGYC	1 cut(s)	89
BstAPI	GCANNNNNTGC	1 cut(s)	548
BstBAI	YACGTR	1 cut(s)	64
BstBI	TTCGAA	1 cut(s)	638
BstC8I	GCNNGC	3 cut(s)	568, 686, 690
BstDEI	CTNAG	7 cut(s)	398, 498, 619, 866, 931, 1031, 1145
BstDSI	CCRYGG	1 cut(s)	459
BstEII	GGTNACC	1 cut(s)	392
BstF5I	GGATG	1 cut(s)	562
BstH2I	RGCGCY	1 cut(s)	1335
BstHHI	GCGC	2 cut(s)	959, 1334
BstKTI	GATC	7 cut(s)	111, 447, 579, 720, 1173, 1230, 1240
BstMAI	GTCTC	3 cut(s)	179, 783, 1238
BstMBI	GATC	7 cut(s)	108, 444, 576, 717, 1170, 1227, 1237
BstMCI	CGRYCG	2 cut(s)	154, 682
BstMWI	GCNNNNNNNGC	1 cut(s)	548
BstNI	CCWGG	3 cut(s)	30, 176, 1268
BstPAI	GACNNNNGTC	1 cut(s)	239
BstPI	GGTNACC	1 cut(s)	392
BstSLI	GKGCMC	2 cut(s)	143, 1352
BstX2I	RGATCY	1 cut(s)	1227
BstXI	CCANNNNNNTGG	1 cut(s)	286
BstYI	RGATCY	1 cut(s)	1227
BstZ17I	GTATAC	1 cut(s)	35
Bsu36I	CCTNAGG	1 cut(s)	398
BsuRI	GGCC	6 cut(s)	126, 141, 290, 1127, 1163, 1460
BtgI	CCRYGG	1 cut(s)	459
BtsCI	GGATG	1 cut(s)	562
BtsI	GCAGTG	2 cut(s)	504, 1374
BtsIMutI	CAGTG	9 cut(s)	504, 708, 790, 939, 973, 975, 1352, 1371, 1374
Cac8I	GCNNGC	3 cut(s)	568, 686, 690
CaiI	CAGNNNCTG	1 cut(s)	405
CciI	TCATGA	2 cut(s)	12, 1212
CfoI	GCGC	2 cut(s)	959, 1334
Cfr10I	RCCGGY	4 cut(s)	153, 389, 1019, 1260
Cfr9I	CCCGGG	3 cut(s)	112, 1122, 1351
CpoI	CGGWCCG	2 cut(s)	1258, 1310
CseI	GACGC	1 cut(s)	641
Csp6I	GTAC	5 cut(s)	105, 121, 214, 222, 1297
CspAI	ACCGGT	2 cut(s)	389, 1260
CspI	CGGWCCG	2 cut(s)	1258, 1310
CviAII	CATG	6 cut(s)	13, 328, 370, 460, 1154, 1213
CviQI	GTAC	5 cut(s)	105, 121, 214, 222, 1297
DdeI	CTNAG	7 cut(s)	398, 498, 619, 866, 931, 1031, 1145
DpnI	GATC	7 cut(s)	110, 446, 578, 719, 1172, 1229, 1239
DpnII	GATC	7 cut(s)	108, 444, 576, 717, 1170, 1227, 1237
DraI	TTTAAA	1 cut(s)	1252
DraIII	CACNNNGTG	1 cut(s)	67
DriI	GACNNNNNGTC	1 cut(s)	304
EaeI	YGGCCR	1 cut(s)	288
Eam1104I	CTCTTC	2 cut(s)	46, 326
Eam1105I	GACNNNNNGTC	1 cut(s)	304
EarI	CTCTTC	2 cut(s)	46, 326
Ecl136II	GAGCTC	1 cut(s)	502
Eco130I	CCWWGG	2 cut(s)	459, 552
Eco24I	GRGCYC	2 cut(s)	143, 504
Eco47I	GGWCC	7 cut(s)	179, 234, 331, 402, 1258, 1302, 1310
Eco53kI	GAGCTC	1 cut(s)	502
Eco57I	CTGAAG	1 cut(s)	713
Eco81I	CCTNAGG	1 cut(s)	398
Eco88I	CYCGRG	4 cut(s)	112, 737, 1122, 1351
Eco91I	GGTNACC	1 cut(s)	392
EcoICRI	GAGCTC	1 cut(s)	502
EcoO109I	RGGNCCY	2 cut(s)	140, 402
EcoO65I	GGTNACC	1 cut(s)	392
EcoRII	CCWGG	3 cut(s)	28, 174, 1266
EcoT14I	CCWWGG	2 cut(s)	459, 552
EcoT38I	GRGCYC	2 cut(s)	143, 504
ErhI	CCWWGG	2 cut(s)	459, 552
Esp3I	CGTCTC	1 cut(s)	179
FaeI	CATG	6 cut(s)	16, 331, 373, 463, 1157, 1216
FalI	AAGNNNNNCTT	2 cut(s)	581, 613
FaqI	GGGAC	5 cut(s)	192, 227, 542, 1232, 1441
FatI	CATG	6 cut(s)	12, 327, 369, 459, 1153, 1212
FauI	CCCGC	1 cut(s)	264
FblI	GTMKAC	2 cut(s)	34, 678
FokI	GGATG	1 cut(s)	569
FriOI	GRGCYC	2 cut(s)	143, 504
FspBI	CTAG	1 cut(s)	567
GlaI	GCGC	2 cut(s)	958, 1333
GsaI	CCCAGC	3 cut(s)	140, 378, 1332
GsuI	CTGGAG	3 cut(s)	12, 569, 680
HaeII	RGCGCY	1 cut(s)	1335
HaeIII	GGCC	6 cut(s)	126, 141, 290, 1127, 1163, 1460
HgaI	GACGC	1 cut(s)	641
HhaI	GCGC	2 cut(s)	959, 1334
Hin1I	GRCGYC	1 cut(s)	89
Hin1II	CATG	6 cut(s)	16, 331, 373, 463, 1157, 1216
Hin6I	GCGC	2 cut(s)	957, 1332
HinP1I	GCGC	2 cut(s)	957, 1332
HincII	GTYRAC	2 cut(s)	274, 679
HindII	GTYRAC	2 cut(s)	274, 679
HindIII	AAGCTT	1 cut(s)	800
HinfI	GANTC	5 cut(s)	659, 864, 1040, 1157, 1415
HpaI	GTTAAC	1 cut(s)	274
HphI	GGTGA	7 cut(s)	45, 69, 379, 404, 1057, 1317, 1414
Hpy166II	GTNNAC	7 cut(s)	35, 274, 387, 679, 841, 983, 1325
Hpy188I	TCNGA	5 cut(s)	151, 249, 427, 863, 1032
Hpy8I	GTNNAC	7 cut(s)	35, 274, 387, 679, 841, 983, 1325
Hpy99I	CGWCG	2 cut(s)	91, 341
HpyAV	CCTTC	6 cut(s)	137, 604, 761, 902, 1171, 1450
HpyCH4III	ACNGT	5 cut(s)	226, 353, 712, 1347, 1366
HpyCH4IV	ACGT	4 cut(s)	63, 89, 188, 282
HpyCH4V	TGCA	4 cut(s)	303, 542, 764, 1057
HpyF10VI	GCNNNNNNNGC	1 cut(s)	548
HpyF3I	CTNAG	7 cut(s)	398, 498, 619, 866, 931, 1031, 1145
HpySE526I	ACGT	4 cut(s)	63, 89, 188, 282
Hsp92I	GRCGYC	1 cut(s)	89
Hsp92II	CATG	6 cut(s)	16, 331, 373, 463, 1157, 1216
HspAI	GCGC	2 cut(s)	957, 1332
Kpn2I	TCCGGA	2 cut(s)	231, 1240
KspAI	GTTAAC	1 cut(s)	274
Kzo9I	GATC	7 cut(s)	108, 444, 576, 717, 1170, 1227, 1237
LmnI	GCTCC	3 cut(s)	485, 626, 705
LweI	GCATC	2 cut(s)	30, 529
MaeI	CTAG	1 cut(s)	567
MaeII	ACGT	4 cut(s)	63, 89, 188, 282
MaeIII	GTNAC	7 cut(s)	67, 90, 392, 493, 968, 1281, 1366
MalI	GATC	7 cut(s)	110, 446, 578, 719, 1172, 1229, 1239
MboI	GATC	7 cut(s)	108, 444, 576, 717, 1170, 1227, 1237
MflI	RGATCY	1 cut(s)	1227
MhlI	GDGCHC	3 cut(s)	143, 504, 1352
MluCI	AATT	2 cut(s)	1115, 1288
MlyI	GAGTC	4 cut(s)	668, 858, 1151, 1409
MmeI	TCCRAC	4 cut(s)	174, 604, 1165, 1329
MroI	TCCGGA	2 cut(s)	231, 1240
MroXI	GAANNNNTTC	2 cut(s)	593, 882
MseI	TTAA	3 cut(s)	273, 381, 1251
MspA1I	CMGCKG	2 cut(s)	259, 684
MvaI	CCWGG	3 cut(s)	30, 176, 1268
MwoI	GCNNNNNNNGC	1 cut(s)	548
NciI	CCSGG	7 cut(s)	113, 114, 1123, 1124, 1352, 1353, 1426
NcoI	CCATGG	1 cut(s)	459
NdeII	GATC	7 cut(s)	108, 444, 576, 717, 1170, 1227, 1237
NheI	GCTAGC	1 cut(s)	566
NlaIII	CATG	6 cut(s)	16, 331, 373, 463, 1157, 1216
NlaIV	GGNNCC	5 cut(s)	141, 142, 173, 180, 1265
NmeAIII	GCCGAG	2 cut(s)	682, 1139
NmuCI	GTSAC	5 cut(s)	67, 90, 392, 968, 1366
NspV	TTCGAA	1 cut(s)	638
PaeR7I	CTCGAG	1 cut(s)	737
PagI	TCATGA	2 cut(s)	12, 1212
PcsI	WCGNNNNNNNCGW	2 cut(s)	288, 675
PdmI	GAANNNNTTC	2 cut(s)	593, 882
PfeI	GAWTC	1 cut(s)	1040
Pfl23II	CGTACG	2 cut(s)	104, 120
PflFI	GACNNNGTC	1 cut(s)	335
PflMI	CCANNNNNTGG	2 cut(s)	489, 525
PfoI	TCCNGGA	1 cut(s)	1266
PinAI	ACCGGT	2 cut(s)	389, 1260
PleI	GAGTC	4 cut(s)	667, 858, 1151, 1409
PpsI	GAGTC	4 cut(s)	667, 858, 1151, 1409
Ppu21I	YACGTR	1 cut(s)	64
PpuMI	RGGWCCY	1 cut(s)	402
PshAI	GACNNNNGTC	1 cut(s)	239
Psp124BI	GAGCTC	1 cut(s)	504
Psp1406I	AACGTT	1 cut(s)	282
Psp5II	RGGWCCY	1 cut(s)	402
Psp6I	CCWGG	3 cut(s)	28, 174, 1266
PspEI	GGTNACC	1 cut(s)	392
PspFI	CCCAGC	3 cut(s)	136, 374, 1328
PspGI	CCWGG	3 cut(s)	28, 174, 1266
PspLI	CGTACG	2 cut(s)	104, 120
PspN4I	GGNNCC	5 cut(s)	141, 142, 173, 180, 1265
PspOMI	GGGCCC	1 cut(s)	139
PspPPI	RGGWCCY	1 cut(s)	402
PstNI	CAGNNNCTG	1 cut(s)	405
PsuI	RGATCY	1 cut(s)	1227
PsyI	GACNNNGTC	1 cut(s)	335
RsaI	GTAC	5 cut(s)	106, 122, 215, 223, 1298
RsaNI	GTAC	5 cut(s)	105, 121, 214, 222, 1297
Rsr2I	CGGWCCG	2 cut(s)	1258, 1310
RsrII	CGGWCCG	2 cut(s)	1258, 1310
SacI	GAGCTC	1 cut(s)	504
SalI	GTCGAC	1 cut(s)	677
SaqAI	TTAA	3 cut(s)	273, 381, 1251
Sau3AI	GATC	7 cut(s)	108, 444, 576, 717, 1170, 1227, 1237
SchI	GAGTC	4 cut(s)	668, 858, 1151, 1409
SduI	GDGCHC	3 cut(s)	143, 504, 1352
SfaNI	GCATC	2 cut(s)	30, 529
Sfr274I	CTCGAG	1 cut(s)	737
SfuI	TTCGAA	1 cut(s)	638
SgrAI	CRCCGGYG	1 cut(s)	389
SinI	GGWCC	7 cut(s)	179, 234, 331, 402, 1258, 1302, 1310
SlaI	CTCGAG	1 cut(s)	737
SmaI	CCCGGG	3 cut(s)	114, 1124, 1353
SmlI	CTYRAG	1 cut(s)	737
SmoI	CTYRAG	1 cut(s)	737
SrfI	GCCCGGGC	2 cut(s)	1124, 1353
Sse9I	AATT	2 cut(s)	1115, 1288
SsiI	CCGC	4 cut(s)	83, 257, 682, 1313
SspMI	CTAG	1 cut(s)	567
SstI	GAGCTC	1 cut(s)	504
StyI	CCWWGG	2 cut(s)	459, 552
TaaI	ACNGT	5 cut(s)	226, 353, 712, 1347, 1366
TaiI	ACGT	4 cut(s)	66, 92, 191, 285
TaqI	TCGA	5 cut(s)	324, 339, 638, 678, 738
TasI	AATT	2 cut(s)	1115, 1288
TatI	WGTACW	2 cut(s)	213, 1296
TfiI	GAWTC	1 cut(s)	1040
Tru1I	TTAA	3 cut(s)	273, 381, 1251
Tru9I	TTAA	3 cut(s)	273, 381, 1251
TscAI	CASTG	9 cut(s)	511, 715, 790, 939, 973, 982, 1352, 1371, 1381
TseFI	GTSAC	5 cut(s)	67, 90, 392, 968, 1366
Tsp45I	GTSAC	5 cut(s)	67, 90, 392, 968, 1366
TspDTI	ATGAA	3 cut(s)	358, 743, 1095
TspGWI	ACGGA	4 cut(s)	92, 120, 221, 1323
TspMI	CCCGGG	3 cut(s)	112, 1122, 1351
TspRI	CASTG	9 cut(s)	511, 715, 790, 939, 973, 982, 1352, 1371, 1381
Tth111I	GACNNNGTC	1 cut(s)	335
Van91I	CCANNNNNTGG	2 cut(s)	489, 525
VpaK11BI	GGWCC	7 cut(s)	179, 234, 331, 402, 1258, 1302, 1310
XhoI	CTCGAG	1 cut(s)	737
XmaI	CCCGGG	3 cut(s)	112, 1122, 1351
XmiI	GTMKAC	2 cut(s)	34, 678
XmnI	GAANNNNTTC	2 cut(s)	593, 882
XspI	CTAG	1 cut(s)	567
ZraI	GACGTC	1 cut(s)	90

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.