Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004188.1

Orthogroup ID

OG0012169

Physical Location & Seq

Genomic Coordinates Reverse (-)

53748 .. 55950

Gene Structure 2203 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004188.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

atgtctgctttcatgatgagcatcactccaggcataccctcttcttcttcttcttcttcttcttcttcaccatcacacgtagtgacttcttcaccaccgccgacgtcacttcccgtccgtacgatcccgggggcgtacggccttccgttgctgggccccatctccgaccggctggactacttctggttccagggaccggagacgttcttcaagaaaagaacggacaagtacaagagtacggtgttccggaccaatgtccctccgagtttcccgctgttcttgggtgttaaccccaacgttgtggccgtgctggactgcaagtcgttctcgtacctcttcgacatggacgtcgtcgagaagaagaactgtctggtcggcgacttcatgcccagtgttaagttcaccggtgacctcaggacctgtgcttaccttgatacttctgaacctcaacacgcccagatcaagagctttgccatggacatcttgaaacaaagctccaagatatgggtaactgagctcactgccaacctctccacattttgggacacgatagatgcagatgttgccaaggatggaaaggctagctatttgatcccactccagaagtccttcttcaatttcctcacaaaatgcttagttggagctgacgcttcgaactcgcccaaaatagccgagtctggctacgctatgctcgaccgctggctcgccctccagctcctccccactgtgaagatcggtgtgcttcagcctctcgaggagattttcctccattcctttgcatacccatcttttcttgtgagtggagactacaaaaaggtttaccagtttatagaagaatatggtaaagaagtagtaaacagaggtcaaaccgagttcggactcagtaaagaagaagctattcacaaccttctgtttgtgcttggcttcaacgcatttggtgggttctcagtgtttcttccaagtttagtaagcacaatagccagtgacaccactggtttacaacaaagactagtcaaagaagtcagggaaaatgccggttcaactctgagttttgaatcggtgaaagacttgcaactcgttcagtctgtggtgtatgaaacactccggctcaaccccccagttcctctccaattcgcccgggccagaaaggacttccaactcagttcgcatgactcggcctttgagatcaagaagggagagttgctttgtgggtttcaaacacaggtcatgagggacgggaagatctttgatgatccggagacttttaaaccggaccggttcctggaaaacaaagagttacagaattatttgtactggtccaacggaccgcaaactggttcacccagcgcctcaaacaaacagtgcccgggcaaggacacagtgaccctcactgcttgtttgttcgttgcttatacgtttcaaagatatgactcaatcaccgggacttcttcctctattacagccgttgagaaggccaagcaggaagcagcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0008150 GO:0008152 GO:0008202 GO:0009507 GO:0009526 GO:0009536 GO:0009611 GO:0009941 GO:0009987 GO:0016125 GO:0016491 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00592 ko01110 map00592 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

497

Amino Acids

55.13

Weight (kDa)

6.06

Isoelectric Point (pI)

44.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012169)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15440
fragaria_vesca	FvH4_6g42740
malus_domestica	MD09G1071400.v1.1 MD17G1100800.v1.1
prunus_persica	Prupe.3G213800_v2.0.a1
pyrus_communis	pycom09g03470 pycom17g09550
rosa_chinensis	RchiOBHm_Chr2g0158631
rosa_laevigata	RLG00000021101
rosa_multiflora	Rmu_co8067608.1_g000001 Rmu_sc0004188.1_g000015 Rmu_sc0034116.1_g000001
rosa_roxburghii	Rroxscaffold_2G00091160
rosa_rugosa	Rorug02G0471000
rosa_samantha	Rh2AG536700 Rh2BG549900 Rh2CG520400 Rh2DG559500
rosa_wichuraiana	Rw2G044430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	347
AatII	GACGTC	2 cut(s)	107, 351
AccB7I	CCANNNNNTGG	2 cut(s)	504, 540
AccIII	TCCGGA	2 cut(s)	246, 1255
AciI	CCGC	4 cut(s)	98, 272, 697, 1328
AclI	AACGTT	1 cut(s)	297
AclWI	GGATC	3 cut(s)	118, 586, 1247
AcoI	YGGCCR	1 cut(s)	303
AcuI	CTGAAG	1 cut(s)	728
AcyI	GRCGYC	2 cut(s)	104, 348
AdeI	CACNNNGTG	1 cut(s)	82
AfaI	GTAC	6 cut(s)	121, 137, 230, 238, 332, 1313
AfiI	CCNNNNNNNGG	7 cut(s)	152, 196, 504, 540, 1282, 1334, 1372
AflIII	ACRYGT	1 cut(s)	76
AgeI	ACCGGT	2 cut(s)	404, 1275
AgsI	TTSAA	8 cut(s)	211, 487, 616, 928, 1041, 1055, 1217, 1421
AhdI	GACNNNNNGTC	1 cut(s)	319
AhlI	ACTAGT	1 cut(s)	1009
AjnI	CCWGG	3 cut(s)	28, 189, 1281
AluBI	AGCT	7 cut(s)	468, 495, 517, 585, 644, 715, 896
AluI	AGCT	7 cut(s)	468, 495, 517, 585, 644, 715, 896
Alw21I	GWGCWC	1 cut(s)	519
Alw26I	GTCTC	3 cut(s)	194, 798, 1253
AlwI	GGATC	3 cut(s)	118, 586, 1247
AlwNI	CAGNNNCTG	1 cut(s)	420
Ama87I	CYCGRG	4 cut(s)	127, 752, 1137, 1366
Aor13HI	TCCGGA	2 cut(s)	246, 1255
AoxI	GGCC	6 cut(s)	139, 154, 303, 1140, 1176, 1473
ApaI	GGGCCC	1 cut(s)	158
ApeKI	GCWGC	1 cut(s)	1487
ArsI	GACNNNNNNTTYG	2 cut(s)	1163, 1195
AsiGI	ACCGGT	2 cut(s)	404, 1275
Asp700I	GAANNNNTTC	2 cut(s)	608, 897
AspLEI	GCGC	1 cut(s)	1349
AspS9I	GGNCC	9 cut(s)	154, 155, 194, 249, 417, 1140, 1273, 1317, 1325
AsuC2I	CCSGG	7 cut(s)	128, 129, 1138, 1139, 1367, 1368, 1441
AsuHPI	GGTGA	7 cut(s)	60, 84, 394, 419, 1072, 1332, 1429
AsuII	TTCGAA	1 cut(s)	653
AsuNHI	GCTAGC	1 cut(s)	581
AvaI	CYCGRG	4 cut(s)	127, 752, 1137, 1366
AvaII	GGWCC	6 cut(s)	194, 249, 417, 1273, 1317, 1325
AxyI	CCTNAGG	1 cut(s)	413
BaeGI	GKGCMC	2 cut(s)	158, 1367
BanII	GRGCYC	2 cut(s)	158, 519
Bbv12I	GWGCWC	1 cut(s)	519
BccI	CCATC	4 cut(s)	79, 167, 566, 793
BceAI	ACGGC	3 cut(s)	154, 290, 1448
BciT130I	CCWGG	3 cut(s)	30, 191, 1283
BcnI	CCSGG	7 cut(s)	128, 129, 1138, 1139, 1367, 1368, 1441
BcoDI	GTCTC	3 cut(s)	194, 798, 1253
BcuI	ACTAGT	1 cut(s)	1009
BfaI	CTAG	2 cut(s)	582, 1010
BfoI	RGCGCY	1 cut(s)	1350
BglII	AGATCT	1 cut(s)	1242
BisI	GCNGC	1 cut(s)	1488
BlsI	GCNGC	1 cut(s)	1489
Bme18I	GGWCC	6 cut(s)	194, 249, 417, 1273, 1317, 1325
BmeRI	GACNNNNNGTC	1 cut(s)	319
BmeT110I	CYCGRG	4 cut(s)	127, 752, 1137, 1366
BmgT120I	GGNCC	9 cut(s)	154, 155, 194, 249, 417, 1140, 1273, 1317, 1325
BmiI	GGNNCC	5 cut(s)	156, 157, 188, 195, 1280
BmrI	ACTGGG	2 cut(s)	384, 1112
BmsI	GCATC	2 cut(s)	30, 544
BmtI	GCTAGC	1 cut(s)	585
BmuI	ACTGGG	2 cut(s)	384, 1112
BoxI	GACNNNNGTC	1 cut(s)	254
BplI	GAGNNNNNCTC	2 cut(s)	10, 42
BpmI	CTGGAG	3 cut(s)	12, 584, 695
Bpu14I	TTCGAA	1 cut(s)	653
BpuMI	CCSGG	7 cut(s)	128, 129, 1138, 1139, 1367, 1368, 1441
BsaAI	YACGTR	1 cut(s)	79
BsaBI	GATNNNNATC	1 cut(s)	20
BsaHI	GRCGYC	2 cut(s)	104, 348
BsaJI	CCNNGG	7 cut(s)	127, 128, 190, 474, 567, 1137, 1366
BsaWI	WCCGGW	6 cut(s)	196, 246, 404, 1255, 1270, 1275
Bsc4I	CCNNNNNNNGG	7 cut(s)	152, 196, 504, 540, 1282, 1334, 1372
Bse118I	RCCGGY	4 cut(s)	168, 404, 1034, 1275
Bse1I	ACTGG	7 cut(s)	390, 823, 981, 997, 1118, 1319, 1339
Bse21I	CCTNAGG	1 cut(s)	413
Bse8I	GATNNNNATC	1 cut(s)	20
BseAI	TCCGGA	2 cut(s)	246, 1255
BseBI	CCWGG	3 cut(s)	30, 191, 1283
BseDI	CCNNGG	7 cut(s)	127, 128, 190, 474, 567, 1137, 1366
BseGI	GGATG	1 cut(s)	577
BseJI	GATNNNNATC	1 cut(s)	20
BseLI	CCNNNNNNNGG	7 cut(s)	152, 196, 504, 540, 1282, 1334, 1372
BseMII	CTCAG	6 cut(s)	427, 504, 895, 960, 1037, 1174
BseNI	ACTGG	7 cut(s)	390, 823, 981, 997, 1118, 1319, 1339
BseRI	GAGGAG	2 cut(s)	707, 770
BseSI	GKGCMC	2 cut(s)	158, 1367
BseYI	CCCAGC	2 cut(s)	151, 1343
Bsh1285I	CGRYCG	2 cut(s)	169, 697
BshFI	GGCC	6 cut(s)	141, 156, 305, 1142, 1178, 1475
BshTI	ACCGGT	2 cut(s)	404, 1275
BsiEI	CGRYCG	2 cut(s)	169, 697
BsiHKAI	GWGCWC	1 cut(s)	519
BsiHKCI	CYCGRG	4 cut(s)	127, 752, 1137, 1366
BsiWI	CGTACG	2 cut(s)	119, 135
BslFI	GGGAC	5 cut(s)	207, 242, 557, 1247, 1456
BslI	CCNNNNNNNGG	7 cut(s)	152, 196, 504, 540, 1282, 1334, 1372
BsmAI	GTCTC	3 cut(s)	194, 798, 1253
BsmBI	CGTCTC	1 cut(s)	194
BsmFI	GGGAC	5 cut(s)	207, 242, 557, 1247, 1456
BsnI	GGCC	6 cut(s)	141, 156, 305, 1142, 1178, 1475
BsoBI	CYCGRG	4 cut(s)	127, 752, 1137, 1366
Bsp119I	TTCGAA	1 cut(s)	653
Bsp120I	GGGCCC	1 cut(s)	154
Bsp1286I	GDGCHC	3 cut(s)	158, 519, 1367
Bsp13I	TCCGGA	2 cut(s)	246, 1255
Bsp143I	GATC	7 cut(s)	123, 459, 591, 732, 1185, 1242, 1252
Bsp19I	CCATGG	1 cut(s)	474
BspACI	CCGC	4 cut(s)	98, 272, 697, 1328
BspANI	GGCC	6 cut(s)	141, 156, 305, 1142, 1178, 1475
BspCNI	CTCAG	6 cut(s)	426, 505, 894, 959, 1038, 1173
BspEI	TCCGGA	2 cut(s)	246, 1255
BspHI	TCATGA	2 cut(s)	12, 1227
BspLI	GGNNCC	5 cut(s)	156, 157, 188, 195, 1280
BspOI	GCTAGC	1 cut(s)	585
BspPI	GGATC	3 cut(s)	118, 586, 1247
BspT104I	TTCGAA	1 cut(s)	653
BsrFI	RCCGGY	4 cut(s)	168, 404, 1034, 1275
BsrI	ACTGG	7 cut(s)	390, 823, 981, 997, 1118, 1319, 1339
BssAI	RCCGGY	4 cut(s)	168, 404, 1034, 1275
BssECI	CCNNGG	7 cut(s)	127, 128, 190, 474, 567, 1137, 1366
BssMI	GATC	7 cut(s)	123, 459, 591, 732, 1185, 1242, 1252
BssNI	GRCGYC	2 cut(s)	104, 348
BssT1I	CCWWGG	2 cut(s)	474, 567
Bst2UI	CCWGG	3 cut(s)	30, 191, 1283
Bst4CI	ACNGT	5 cut(s)	241, 368, 727, 1362, 1381
Bst6I	CTCTTC	2 cut(s)	46, 341
BstACI	GRCGYC	2 cut(s)	104, 348
BstAPI	GCANNNNNTGC	1 cut(s)	563
BstBAI	YACGTR	1 cut(s)	79
BstBI	TTCGAA	1 cut(s)	653
BstC8I	GCNNGC	3 cut(s)	583, 701, 705
BstDEI	CTNAG	7 cut(s)	413, 513, 634, 881, 946, 1046, 1160
BstDSI	CCRYGG	1 cut(s)	474
BstEII	GGTNACC	1 cut(s)	407
BstF5I	GGATG	1 cut(s)	577
BstH2I	RGCGCY	1 cut(s)	1350
BstHHI	GCGC	1 cut(s)	1349
BstKTI	GATC	7 cut(s)	126, 462, 594, 735, 1188, 1245, 1255
BstMAI	GTCTC	3 cut(s)	194, 798, 1253
BstMBI	GATC	7 cut(s)	123, 459, 591, 732, 1185, 1242, 1252
BstMCI	CGRYCG	2 cut(s)	169, 697
BstMWI	GCNNNNNNNGC	1 cut(s)	563
BstNI	CCWGG	3 cut(s)	30, 191, 1283
BstPAI	GACNNNNGTC	1 cut(s)	254
BstPI	GGTNACC	1 cut(s)	407
BstSLI	GKGCMC	2 cut(s)	158, 1367
BstX2I	RGATCY	1 cut(s)	1242
BstXI	CCANNNNNNTGG	1 cut(s)	301
BstYI	RGATCY	1 cut(s)	1242
Bsu36I	CCTNAGG	1 cut(s)	413
BsuRI	GGCC	6 cut(s)	141, 156, 305, 1142, 1178, 1475
BtgI	CCRYGG	1 cut(s)	474
BtsCI	GGATG	1 cut(s)	577
BtsI	GCAGTG	2 cut(s)	519, 1389
BtsIMutI	CAGTG	9 cut(s)	397, 519, 723, 954, 988, 990, 1367, 1386, 1389
Cac8I	GCNNGC	3 cut(s)	583, 701, 705
CaiI	CAGNNNCTG	1 cut(s)	420
CciI	TCATGA	2 cut(s)	12, 1227
CfoI	GCGC	1 cut(s)	1349
Cfr10I	RCCGGY	4 cut(s)	168, 404, 1034, 1275
Cfr13I	GGNCC	9 cut(s)	154, 155, 194, 249, 417, 1140, 1273, 1317, 1325
Cfr9I	CCCGGG	3 cut(s)	127, 1137, 1366
CpoI	CGGWCCG	2 cut(s)	1273, 1325
CseI	GACGC	1 cut(s)	656
Csp6I	GTAC	6 cut(s)	120, 136, 229, 237, 331, 1312
CspAI	ACCGGT	2 cut(s)	404, 1275
CspI	CGGWCCG	2 cut(s)	1273, 1325
CviAII	CATG	7 cut(s)	13, 343, 385, 475, 1169, 1228, 1491
CviQI	GTAC	6 cut(s)	120, 136, 229, 237, 331, 1312
DdeI	CTNAG	7 cut(s)	413, 513, 634, 881, 946, 1046, 1160
DpnI	GATC	7 cut(s)	125, 461, 593, 734, 1187, 1244, 1254
DpnII	GATC	7 cut(s)	123, 459, 591, 732, 1185, 1242, 1252
DraI	TTTAAA	1 cut(s)	1267
DraIII	CACNNNGTG	1 cut(s)	82
DrdI	GACNNNNNNGTC	1 cut(s)	347
DriI	GACNNNNNGTC	1 cut(s)	319
DseDI	GACNNNNNNGTC	1 cut(s)	347
EaeI	YGGCCR	1 cut(s)	303
Eam1104I	CTCTTC	2 cut(s)	46, 341
Eam1105I	GACNNNNNGTC	1 cut(s)	319
EarI	CTCTTC	2 cut(s)	46, 341
Ecl136II	GAGCTC	1 cut(s)	517
Eco130I	CCWWGG	2 cut(s)	474, 567
Eco24I	GRGCYC	2 cut(s)	158, 519
Eco47I	GGWCC	6 cut(s)	194, 249, 417, 1273, 1317, 1325
Eco53kI	GAGCTC	1 cut(s)	517
Eco57I	CTGAAG	1 cut(s)	728
Eco81I	CCTNAGG	1 cut(s)	413
Eco88I	CYCGRG	4 cut(s)	127, 752, 1137, 1366
Eco91I	GGTNACC	1 cut(s)	407
EcoICRI	GAGCTC	1 cut(s)	517
EcoO109I	RGGNCCY	2 cut(s)	155, 417
EcoO65I	GGTNACC	1 cut(s)	407
EcoRII	CCWGG	3 cut(s)	28, 189, 1281
EcoT14I	CCWWGG	2 cut(s)	474, 567
EcoT38I	GRGCYC	2 cut(s)	158, 519
ErhI	CCWWGG	2 cut(s)	474, 567
Esp3I	CGTCTC	1 cut(s)	194
FaeI	CATG	7 cut(s)	16, 346, 388, 478, 1172, 1231, 1494
FalI	AAGNNNNNCTT	2 cut(s)	596, 628
FaqI	GGGAC	5 cut(s)	207, 242, 557, 1247, 1456
FatI	CATG	7 cut(s)	12, 342, 384, 474, 1168, 1227, 1490
FauI	CCCGC	1 cut(s)	279
Fnu4HI	GCNGC	1 cut(s)	1488
FokI	GGATG	1 cut(s)	584
FriOI	GRGCYC	2 cut(s)	158, 519
Fsp4HI	GCNGC	1 cut(s)	1488
FspBI	CTAG	2 cut(s)	582, 1010
GlaI	GCGC	1 cut(s)	1348
GluI	GCNGC	1 cut(s)	1488
GsaI	CCCAGC	2 cut(s)	155, 1347
GsuI	CTGGAG	3 cut(s)	12, 584, 695
HaeII	RGCGCY	1 cut(s)	1350
HaeIII	GGCC	6 cut(s)	141, 156, 305, 1142, 1178, 1475
HgaI	GACGC	1 cut(s)	656
HhaI	GCGC	1 cut(s)	1349
Hin1I	GRCGYC	2 cut(s)	104, 348
Hin1II	CATG	7 cut(s)	16, 346, 388, 478, 1172, 1231, 1494
Hin6I	GCGC	1 cut(s)	1347
HinP1I	GCGC	1 cut(s)	1347
HincII	GTYRAC	1 cut(s)	289
HindII	GTYRAC	1 cut(s)	289
HinfI	GANTC	5 cut(s)	674, 879, 1055, 1172, 1430
HpaI	GTTAAC	1 cut(s)	289
HphI	GGTGA	7 cut(s)	60, 84, 394, 419, 1072, 1332, 1429
Hpy166II	GTNNAC	6 cut(s)	289, 402, 820, 856, 998, 1340
Hpy188I	TCNGA	5 cut(s)	166, 264, 442, 878, 1047
Hpy8I	GTNNAC	6 cut(s)	289, 402, 820, 856, 998, 1340
Hpy99I	CGWCG	3 cut(s)	106, 353, 356
HpyAV	CCTTC	5 cut(s)	152, 619, 917, 1186, 1465
HpyCH4III	ACNGT	5 cut(s)	241, 368, 727, 1362, 1381
HpyCH4IV	ACGT	6 cut(s)	78, 104, 203, 297, 348, 1415
HpyCH4V	TGCA	4 cut(s)	318, 557, 779, 1072
HpyF10VI	GCNNNNNNNGC	1 cut(s)	563
HpyF3I	CTNAG	7 cut(s)	413, 513, 634, 881, 946, 1046, 1160
HpySE526I	ACGT	6 cut(s)	78, 104, 203, 297, 348, 1415
Hsp92I	GRCGYC	2 cut(s)	104, 348
Hsp92II	CATG	7 cut(s)	16, 346, 388, 478, 1172, 1231, 1494
HspAI	GCGC	1 cut(s)	1347
Kpn2I	TCCGGA	2 cut(s)	246, 1255
KspAI	GTTAAC	1 cut(s)	289
Kzo9I	GATC	7 cut(s)	123, 459, 591, 732, 1185, 1242, 1252
LmnI	GCTCC	3 cut(s)	500, 641, 720
LweI	GCATC	2 cut(s)	30, 544
MaeI	CTAG	2 cut(s)	582, 1010
MaeII	ACGT	6 cut(s)	78, 104, 203, 297, 348, 1415
MaeIII	GTNAC	7 cut(s)	82, 105, 407, 508, 983, 1296, 1381
MalI	GATC	7 cut(s)	125, 461, 593, 734, 1187, 1244, 1254
MboI	GATC	7 cut(s)	123, 459, 591, 732, 1185, 1242, 1252
MflI	RGATCY	1 cut(s)	1242
MhlI	GDGCHC	3 cut(s)	158, 519, 1367
MluCI	AATT	3 cut(s)	616, 1130, 1303
MlyI	GAGTC	4 cut(s)	683, 873, 1166, 1424
MmeI	TCCRAC	4 cut(s)	189, 619, 1180, 1344
MroI	TCCGGA	2 cut(s)	246, 1255
MroXI	GAANNNNTTC	2 cut(s)	608, 897
MseI	TTAA	3 cut(s)	288, 396, 1266
MspA1I	CMGCKG	2 cut(s)	274, 699
MvaI	CCWGG	3 cut(s)	30, 191, 1283
MwoI	GCNNNNNNNGC	1 cut(s)	563
NciI	CCSGG	7 cut(s)	128, 129, 1138, 1139, 1367, 1368, 1441
NcoI	CCATGG	1 cut(s)	474
NdeII	GATC	7 cut(s)	123, 459, 591, 732, 1185, 1242, 1252
NheI	GCTAGC	1 cut(s)	581
NlaIII	CATG	7 cut(s)	16, 346, 388, 478, 1172, 1231, 1494
NlaIV	GGNNCC	5 cut(s)	156, 157, 188, 195, 1280
NmeAIII	GCCGAG	2 cut(s)	697, 1154
NmuCI	GTSAC	5 cut(s)	82, 105, 407, 983, 1381
NspV	TTCGAA	1 cut(s)	653
PaeR7I	CTCGAG	1 cut(s)	752
PagI	TCATGA	2 cut(s)	12, 1227
PcsI	WCGNNNNNNNCGW	3 cut(s)	303, 345, 690
PdmI	GAANNNNTTC	2 cut(s)	608, 897
PfeI	GAWTC	1 cut(s)	1055
Pfl23II	CGTACG	2 cut(s)	119, 135
PflFI	GACNNNGTC	1 cut(s)	350
PflMI	CCANNNNNTGG	2 cut(s)	504, 540
PfoI	TCCNGGA	1 cut(s)	1281
PinAI	ACCGGT	2 cut(s)	404, 1275
PkrI	GCNGC	1 cut(s)	1489
PleI	GAGTC	4 cut(s)	682, 873, 1166, 1424
PpsI	GAGTC	4 cut(s)	682, 873, 1166, 1424
Ppu21I	YACGTR	1 cut(s)	79
PpuMI	RGGWCCY	1 cut(s)	417
PshAI	GACNNNNGTC	1 cut(s)	254
Psp124BI	GAGCTC	1 cut(s)	519
Psp1406I	AACGTT	1 cut(s)	297
Psp5II	RGGWCCY	1 cut(s)	417
Psp6I	CCWGG	3 cut(s)	28, 189, 1281
PspEI	GGTNACC	1 cut(s)	407
PspFI	CCCAGC	2 cut(s)	151, 1343
PspGI	CCWGG	3 cut(s)	28, 189, 1281
PspLI	CGTACG	2 cut(s)	119, 135
PspN4I	GGNNCC	5 cut(s)	156, 157, 188, 195, 1280
PspOMI	GGGCCC	1 cut(s)	154
PspPI	GGNCC	9 cut(s)	154, 155, 194, 249, 417, 1140, 1273, 1317, 1325
PspPPI	RGGWCCY	1 cut(s)	417
PstNI	CAGNNNCTG	1 cut(s)	420
PsuI	RGATCY	1 cut(s)	1242
PsyI	GACNNNGTC	1 cut(s)	350
RsaI	GTAC	6 cut(s)	121, 137, 230, 238, 332, 1313
RsaNI	GTAC	6 cut(s)	120, 136, 229, 237, 331, 1312
Rsr2I	CGGWCCG	2 cut(s)	1273, 1325
RsrII	CGGWCCG	2 cut(s)	1273, 1325
SacI	GAGCTC	1 cut(s)	519
SaqAI	TTAA	3 cut(s)	288, 396, 1266
SatI	GCNGC	1 cut(s)	1488
Sau3AI	GATC	7 cut(s)	123, 459, 591, 732, 1185, 1242, 1252
Sau96I	GGNCC	9 cut(s)	154, 155, 194, 249, 417, 1140, 1273, 1317, 1325
SchI	GAGTC	4 cut(s)	683, 873, 1166, 1424
SduI	GDGCHC	3 cut(s)	158, 519, 1367
SfaNI	GCATC	2 cut(s)	30, 544
Sfr274I	CTCGAG	1 cut(s)	752
SfuI	TTCGAA	1 cut(s)	653
SgrAI	CRCCGGYG	1 cut(s)	404
SinI	GGWCC	6 cut(s)	194, 249, 417, 1273, 1317, 1325
SlaI	CTCGAG	1 cut(s)	752
SmaI	CCCGGG	3 cut(s)	129, 1139, 1368
SmlI	CTYRAG	1 cut(s)	752
SmoI	CTYRAG	1 cut(s)	752
SpeI	ACTAGT	1 cut(s)	1009
SrfI	GCCCGGGC	2 cut(s)	1139, 1368
Sse9I	AATT	3 cut(s)	616, 1130, 1303
SsiI	CCGC	4 cut(s)	98, 272, 697, 1328
SspMI	CTAG	2 cut(s)	582, 1010
SstI	GAGCTC	1 cut(s)	519
StyI	CCWWGG	2 cut(s)	474, 567
TaaI	ACNGT	5 cut(s)	241, 368, 727, 1362, 1381
TaiI	ACGT	6 cut(s)	81, 107, 206, 300, 351, 1418
TaqI	TCGA	5 cut(s)	339, 354, 653, 693, 753
TasI	AATT	3 cut(s)	616, 1130, 1303
TatI	WGTACW	2 cut(s)	228, 1311
TfiI	GAWTC	1 cut(s)	1055
Tru1I	TTAA	3 cut(s)	288, 396, 1266
Tru9I	TTAA	3 cut(s)	288, 396, 1266
TscAI	CASTG	9 cut(s)	397, 526, 730, 954, 988, 997, 1367, 1386, 1396
TseFI	GTSAC	5 cut(s)	82, 105, 407, 983, 1381
TseI	GCWGC	1 cut(s)	1487
Tsp45I	GTSAC	5 cut(s)	82, 105, 407, 983, 1381
TspDTI	ATGAA	2 cut(s)	373, 1110
TspGWI	ACGGA	4 cut(s)	107, 135, 236, 1338
TspMI	CCCGGG	3 cut(s)	127, 1137, 1366
TspRI	CASTG	9 cut(s)	397, 526, 730, 954, 988, 997, 1367, 1386, 1396
Tth111I	GACNNNGTC	1 cut(s)	350
Van91I	CCANNNNNTGG	2 cut(s)	504, 540
VpaK11BI	GGWCC	6 cut(s)	194, 249, 417, 1273, 1317, 1325
XhoI	CTCGAG	1 cut(s)	752
XmaI	CCCGGG	3 cut(s)	127, 1137, 1366
XmnI	GAANNNNTTC	2 cut(s)	608, 897
XspI	CTAG	2 cut(s)	582, 1010
ZraI	GACGTC	2 cut(s)	105, 349

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.