Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD04G1229300.v1.1 |
| pyrus_communis | pycom04g20320 |
| rosa_chinensis | RchiOBHm_Chr3g0485431 |
| rosa_multiflora | Rmu_co8054398.1_g000001 Rmu_sc0000168.1_g000003 Rmu_sc0010132.1_g000031 |
| rosa_roxburghii | Rroxscaffold_2G00083510 Rroxscaffold_3G00271750 |
| rosa_samantha | Rh4CG395300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 208 |
| AflIII | ACRYGT | 1 cut(s) | 97 |
| AgsI | TTSAA | 2 cut(s) | 92, 286 |
| AjnI | CCWGG | 1 cut(s) | 31 |
| AluBI | AGCT | 4 cut(s) | 76, 111, 134, 159 |
| AluI | AGCT | 4 cut(s) | 76, 111, 134, 159 |
| Alw26I | GTCTC | 1 cut(s) | 143 |
| ApeKI | GCWGC | 1 cut(s) | 159 |
| ApoI | RAATTY | 1 cut(s) | 208 |
| AseI | ATTAAT | 1 cut(s) | 272 |
| AspS9I | GGNCC | 1 cut(s) | 47 |
| AvaII | GGWCC | 1 cut(s) | 47 |
| AxyI | CCTNAGG | 1 cut(s) | 60 |
| BbsI | GAAGAC | 1 cut(s) | 231 |
| BbvI | GCAGC | 1 cut(s) | 146 |
| BccI | CCATC | 2 cut(s) | 165, 242 |
| BciT130I | CCWGG | 1 cut(s) | 33 |
| BcoDI | GTCTC | 1 cut(s) | 143 |
| BfmI | CTRYAG | 1 cut(s) | 160 |
| BisI | GCNGC | 1 cut(s) | 160 |
| BlsI | GCNGC | 1 cut(s) | 161 |
| Bme1390I | CCNGG | 1 cut(s) | 33 |
| Bme18I | GGWCC | 1 cut(s) | 47 |
| BmgT120I | GGNCC | 1 cut(s) | 47 |
| BmrFI | CCNGG | 1 cut(s) | 33 |
| BmsI | GCATC | 1 cut(s) | 35 |
| BpiI | GAAGAC | 1 cut(s) | 231 |
| BsaI | GGTCTC | 1 cut(s) | 143 |
| BsaJI | CCNNGG | 2 cut(s) | 50, 103 |
| Bse21I | CCTNAGG | 1 cut(s) | 60 |
| BseBI | CCWGG | 1 cut(s) | 33 |
| BseDI | CCNNGG | 2 cut(s) | 50, 103 |
| BseMII | CTCAG | 1 cut(s) | 74 |
| BseRI | GAGGAG | 1 cut(s) | 48 |
| BseXI | GCAGC | 1 cut(s) | 146 |
| BsmAI | GTCTC | 1 cut(s) | 143 |
| Bso31I | GGTCTC | 1 cut(s) | 143 |
| Bsp19I | CCATGG | 2 cut(s) | 50, 103 |
| BspCNI | CTCAG | 1 cut(s) | 73 |
| BspMAI | CTGCAG | 1 cut(s) | 164 |
| BspTNI | GGTCTC | 1 cut(s) | 143 |
| BssECI | CCNNGG | 2 cut(s) | 50, 103 |
| BssT1I | CCWWGG | 2 cut(s) | 50, 103 |
| Bst2UI | CCWGG | 1 cut(s) | 33 |
| BstC8I | GCNNGC | 2 cut(s) | 113, 164 |
| BstDEI | CTNAG | 2 cut(s) | 60, 167 |
| BstDSI | CCRYGG | 2 cut(s) | 50, 103 |
| BstMAI | GTCTC | 1 cut(s) | 143 |
| BstNI | CCWGG | 1 cut(s) | 33 |
| BstNSI | RCATGY | 1 cut(s) | 101 |
| BstSCI | CCNGG | 1 cut(s) | 31 |
| BstSFI | CTRYAG | 1 cut(s) | 160 |
| BstV1I | GCAGC | 1 cut(s) | 146 |
| BstV2I | GAAGAC | 1 cut(s) | 231 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 134, 149 |
| Bsu36I | CCTNAGG | 1 cut(s) | 60 |
| BtgI | CCRYGG | 2 cut(s) | 50, 103 |
| Cac8I | GCNNGC | 2 cut(s) | 113, 164 |
| Cfr13I | GGNCC | 1 cut(s) | 47 |
| CviAII | CATG | 4 cut(s) | 51, 98, 104, 248 |
| CviJI | RGCY | 5 cut(s) | 76, 111, 134, 159, 166 |
| CviKI_1 | RGCY | 5 cut(s) | 76, 111, 134, 159, 166 |
| DdeI | CTNAG | 2 cut(s) | 60, 167 |
| Eco130I | CCWWGG | 2 cut(s) | 50, 103 |
| Eco31I | GGTCTC | 1 cut(s) | 143 |
| Eco47I | GGWCC | 1 cut(s) | 47 |
| Eco81I | CCTNAGG | 1 cut(s) | 60 |
| EcoRII | CCWGG | 1 cut(s) | 31 |
| EcoT14I | CCWWGG | 2 cut(s) | 50, 103 |
| ErhI | CCWWGG | 2 cut(s) | 50, 103 |
| FaeI | CATG | 4 cut(s) | 54, 101, 107, 251 |
| FaiI | YATR | 4 cut(s) | 52, 99, 105, 249 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 62, 94 |
| FatI | CATG | 4 cut(s) | 50, 97, 103, 247 |
| Fnu4HI | GCNGC | 1 cut(s) | 160 |
| Fsp4HI | GCNGC | 1 cut(s) | 160 |
| GluI | GCNGC | 1 cut(s) | 160 |
| Hin1II | CATG | 4 cut(s) | 54, 101, 107, 251 |
| HinfI | GANTC | 2 cut(s) | 55, 286 |
| Hpy188III | TCNNGA | 1 cut(s) | 62 |
| HpyCH4V | TGCA | 4 cut(s) | 26, 162, 220, 251 |
| HpyF3I | CTNAG | 2 cut(s) | 60, 167 |
| Hsp92II | CATG | 4 cut(s) | 54, 101, 107, 251 |
| Lsp1109I | GCAGC | 1 cut(s) | 146 |
| LweI | GCATC | 1 cut(s) | 35 |
| MboII | GAAGA | 1 cut(s) | 236 |
| MluCI | AATT | 5 cut(s) | 208, 269, 273, 281, 292 |
| MlyI | GAGTC | 1 cut(s) | 49 |
| MnlI | CCTC | 4 cut(s) | 38, 58, 69, 197 |
| MseI | TTAA | 4 cut(s) | 198, 272, 291, 295 |
| MslI | CAYNNNNRTG | 1 cut(s) | 102 |
| MspR9I | CCNGG | 1 cut(s) | 33 |
| MvaI | CCWGG | 1 cut(s) | 33 |
| NcoI | CCATGG | 2 cut(s) | 50, 103 |
| NlaIII | CATG | 4 cut(s) | 54, 101, 107, 251 |
| NspI | RCATGY | 1 cut(s) | 101 |
| PacI | TTAATTAA | 1 cut(s) | 295 |
| PciI | ACATGT | 1 cut(s) | 97 |
| PfeI | GAWTC | 1 cut(s) | 286 |
| PfoI | TCCNGGA | 1 cut(s) | 31 |
| PkrI | GCNGC | 1 cut(s) | 161 |
| PleI | GAGTC | 1 cut(s) | 49 |
| PpsI | GAGTC | 1 cut(s) | 49 |
| PscI | ACATGT | 1 cut(s) | 97 |
| PshBI | ATTAAT | 1 cut(s) | 272 |
| Psp6I | CCWGG | 1 cut(s) | 31 |
| PspGI | CCWGG | 1 cut(s) | 31 |
| PspPI | GGNCC | 1 cut(s) | 47 |
| PstI | CTGCAG | 1 cut(s) | 164 |
| RseI | CAYNNNNRTG | 1 cut(s) | 102 |
| SaqAI | TTAA | 4 cut(s) | 198, 272, 291, 295 |
| SatI | GCNGC | 1 cut(s) | 160 |
| Sau96I | GGNCC | 1 cut(s) | 47 |
| SchI | GAGTC | 1 cut(s) | 49 |
| ScrFI | CCNGG | 1 cut(s) | 33 |
| SetI | ASST | 5 cut(s) | 49, 78, 113, 136, 161 |
| SfaNI | GCATC | 1 cut(s) | 35 |
| SfcI | CTRYAG | 1 cut(s) | 160 |
| SinI | GGWCC | 1 cut(s) | 47 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 102 |
| Sse9I | AATT | 5 cut(s) | 208, 269, 273, 281, 292 |
| StyD4I | CCNGG | 1 cut(s) | 31 |
| StyI | CCWWGG | 2 cut(s) | 50, 103 |
| TasI | AATT | 5 cut(s) | 208, 269, 273, 281, 292 |
| TfiI | GAWTC | 1 cut(s) | 286 |
| Tru1I | TTAA | 4 cut(s) | 198, 272, 291, 295 |
| Tru9I | TTAA | 4 cut(s) | 198, 272, 291, 295 |
| TseI | GCWGC | 1 cut(s) | 159 |
| TspDTI | ATGAA | 1 cut(s) | 236 |
| VpaK11BI | GGWCC | 1 cut(s) | 47 |
| VspI | ATTAAT | 1 cut(s) | 272 |
| XapI | RAATTY | 1 cut(s) | 208 |
| XceI | RCATGY | 1 cut(s) | 101 |