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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g45570 |
| rosa_chinensis | RchiOBHm_Chr4g0412611 |
| rosa_laevigata | RLG00000008273 RLG00000021407 |
| rosa_multiflora | Rmu_sc0002136.1_g000001 Rmu_sc0016141.1_g000010 Rmu_sc0032469.1_g000005 Rmu_ssc0000381.1_g000035 |
| rosa_roxburghii | Rroxscaffold_5G00356730 Rroxscaffold_5G00356790 Rroxscaffold_7G00189160 |
| rosa_rugosa | Rorug04G0102800 |
| rosa_samantha | Rh4BG173600 Rh4BG173700 Rh4CG184600 Rh4CG185100 Rh4CG185200 Rh4DG169000 Rh4DG169100 Rh4DG169900 Rh4DG170400 Rh6AG165500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 7 |
| AclWI | GGATC | 3 cut(s) | 172, 176, 189 |
| AfaI | GTAC | 2 cut(s) | 20, 251 |
| AgsI | TTSAA | 1 cut(s) | 259 |
| AluBI | AGCT | 1 cut(s) | 202 |
| AluI | AGCT | 1 cut(s) | 202 |
| AlwI | GGATC | 3 cut(s) | 172, 176, 189 |
| ApeKI | GCWGC | 1 cut(s) | 199 |
| AsuC2I | CCSGG | 1 cut(s) | 179 |
| AsuHPI | GGTGA | 1 cut(s) | 97 |
| BamHI | GGATCC | 1 cut(s) | 181 |
| BbvI | GCAGC | 1 cut(s) | 211 |
| BccI | CCATC | 4 cut(s) | 110, 131, 155, 259 |
| BcnI | CCSGG | 1 cut(s) | 179 |
| BfmI | CTRYAG | 1 cut(s) | 203 |
| BisI | GCNGC | 1 cut(s) | 200 |
| BlsI | GCNGC | 1 cut(s) | 201 |
| Bme1390I | CCNGG | 1 cut(s) | 179 |
| BmiI | GGNNCC | 1 cut(s) | 183 |
| BmrFI | CCNGG | 1 cut(s) | 179 |
| BmrI | ACTGGG | 1 cut(s) | 222 |
| BmuI | ACTGGG | 1 cut(s) | 222 |
| BpuMI | CCSGG | 1 cut(s) | 179 |
| Bsa29I | ATCGAT | 1 cut(s) | 93 |
| BsaJI | CCNNGG | 1 cut(s) | 189 |
| Bse1I | ACTGG | 1 cut(s) | 217 |
| BseCI | ATCGAT | 1 cut(s) | 93 |
| BseDI | CCNNGG | 1 cut(s) | 189 |
| BseGI | GGATG | 2 cut(s) | 142, 169 |
| BseNI | ACTGG | 1 cut(s) | 217 |
| BseXI | GCAGC | 1 cut(s) | 211 |
| BsgI | GTGCAG | 1 cut(s) | 167 |
| BshVI | ATCGAT | 1 cut(s) | 93 |
| BsiSI | CCGG | 1 cut(s) | 179 |
| Bsp1407I | TGTACA | 1 cut(s) | 18 |
| Bsp143I | GATC | 4 cut(s) | 90, 94, 164, 181 |
| Bsp19I | CCATGG | 1 cut(s) | 189 |
| BspACI | CCGC | 1 cut(s) | 7 |
| BspDI | ATCGAT | 1 cut(s) | 93 |
| BspLI | GGNNCC | 1 cut(s) | 183 |
| BspPI | GGATC | 3 cut(s) | 172, 176, 189 |
| BsrGI | TGTACA | 1 cut(s) | 18 |
| BsrI | ACTGG | 1 cut(s) | 217 |
| BssECI | CCNNGG | 1 cut(s) | 189 |
| BssMI | GATC | 4 cut(s) | 90, 94, 164, 181 |
| BssT1I | CCWWGG | 1 cut(s) | 189 |
| BstAUI | TGTACA | 1 cut(s) | 18 |
| BstC8I | GCNNGC | 1 cut(s) | 28 |
| BstDSI | CCRYGG | 1 cut(s) | 189 |
| BstF5I | GGATG | 2 cut(s) | 142, 169 |
| BstKTI | GATC | 4 cut(s) | 93, 97, 167, 184 |
| BstMBI | GATC | 4 cut(s) | 90, 94, 164, 181 |
| BstSCI | CCNGG | 1 cut(s) | 177 |
| BstSFI | CTRYAG | 1 cut(s) | 203 |
| BstV1I | GCAGC | 1 cut(s) | 211 |
| BstX2I | RGATCY | 1 cut(s) | 181 |
| BstYI | RGATCY | 1 cut(s) | 181 |
| Bsu15I | ATCGAT | 1 cut(s) | 93 |
| BsuTUI | ATCGAT | 1 cut(s) | 93 |
| BtgI | CCRYGG | 1 cut(s) | 189 |
| BtsCI | GGATG | 2 cut(s) | 142, 169 |
| BtsI | GCAGTG | 1 cut(s) | 155 |
| BtsIMutI | CAGTG | 1 cut(s) | 155 |
| Cac8I | GCNNGC | 1 cut(s) | 28 |
| ClaI | ATCGAT | 1 cut(s) | 93 |
| Csp6I | GTAC | 2 cut(s) | 19, 250 |
| CviAII | CATG | 1 cut(s) | 190 |
| CviJI | RGCY | 2 cut(s) | 26, 202 |
| CviKI_1 | RGCY | 2 cut(s) | 26, 202 |
| CviQI | GTAC | 2 cut(s) | 19, 250 |
| DpnI | GATC | 4 cut(s) | 92, 96, 166, 183 |
| DpnII | GATC | 4 cut(s) | 90, 94, 164, 181 |
| Eco130I | CCWWGG | 1 cut(s) | 189 |
| EcoT14I | CCWWGG | 1 cut(s) | 189 |
| ErhI | CCWWGG | 1 cut(s) | 189 |
| FaeI | CATG | 1 cut(s) | 193 |
| FaiI | YATR | 6 cut(s) | 57, 78, 80, 191, 227, 286 |
| FatI | CATG | 1 cut(s) | 189 |
| FauNDI | CATATG | 1 cut(s) | 78 |
| Fnu4HI | GCNGC | 1 cut(s) | 200 |
| FokI | GGATG | 2 cut(s) | 149, 156 |
| Fsp4HI | GCNGC | 1 cut(s) | 200 |
| GluI | GCNGC | 1 cut(s) | 200 |
| HapII | CCGG | 1 cut(s) | 179 |
| Hin1II | CATG | 1 cut(s) | 193 |
| HinfI | GANTC | 1 cut(s) | 280 |
| HpaII | CCGG | 1 cut(s) | 179 |
| HphI | GGTGA | 1 cut(s) | 97 |
| Hpy166II | GTNNAC | 1 cut(s) | 250 |
| Hpy188III | TCNNGA | 1 cut(s) | 158 |
| Hpy8I | GTNNAC | 1 cut(s) | 250 |
| HpyAV | CCTTC | 1 cut(s) | 195 |
| HpyCH4V | TGCA | 1 cut(s) | 148 |
| Hsp92II | CATG | 1 cut(s) | 193 |
| Kzo9I | GATC | 4 cut(s) | 90, 94, 164, 181 |
| LpnPI | CCDG | 3 cut(s) | 40, 192, 198 |
| Lsp1109I | GCAGC | 1 cut(s) | 211 |
| MalI | GATC | 4 cut(s) | 92, 96, 166, 183 |
| MboI | GATC | 4 cut(s) | 90, 94, 164, 181 |
| MboII | GAAGA | 1 cut(s) | 100 |
| MflI | RGATCY | 1 cut(s) | 181 |
| MnlI | CCTC | 2 cut(s) | 127, 268 |
| MspI | CCGG | 1 cut(s) | 179 |
| MspR9I | CCNGG | 1 cut(s) | 179 |
| NciI | CCSGG | 1 cut(s) | 179 |
| NcoI | CCATGG | 1 cut(s) | 189 |
| NdeI | CATATG | 1 cut(s) | 78 |
| NdeII | GATC | 4 cut(s) | 90, 94, 164, 181 |
| NlaIII | CATG | 1 cut(s) | 193 |
| NlaIV | GGNNCC | 1 cut(s) | 183 |
| PfeI | GAWTC | 1 cut(s) | 280 |
| PkrI | GCNGC | 1 cut(s) | 201 |
| PspN4I | GGNNCC | 1 cut(s) | 183 |
| PsuI | RGATCY | 1 cut(s) | 181 |
| RsaI | GTAC | 2 cut(s) | 20, 251 |
| RsaNI | GTAC | 2 cut(s) | 19, 250 |
| SatI | GCNGC | 1 cut(s) | 200 |
| Sau3AI | GATC | 4 cut(s) | 90, 94, 164, 181 |
| ScrFI | CCNGG | 1 cut(s) | 179 |
| SetI | ASST | 2 cut(s) | 53, 204 |
| SfcI | CTRYAG | 1 cut(s) | 203 |
| SgeI | CNNG | 8 cut(s) | 39, 43, 170, 190, 191, 202, 225, 268 |
| SsiI | CCGC | 1 cut(s) | 7 |
| StyD4I | CCNGG | 1 cut(s) | 177 |
| StyI | CCWWGG | 1 cut(s) | 189 |
| TaqI | TCGA | 1 cut(s) | 93 |
| TatI | WGTACW | 2 cut(s) | 18, 249 |
| TfiI | GAWTC | 1 cut(s) | 280 |
| TscAI | CASTG | 1 cut(s) | 155 |
| TseI | GCWGC | 1 cut(s) | 199 |
| TspRI | CASTG | 1 cut(s) | 155 |