Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009973

Physical Location & Seq

Genomic Coordinates Forward (+)

61580112 .. 61582882

Gene Structure 2771 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40721

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGTCCGTCAAGGAATTTACAGCAGACCAATAGGAAATAAAAGCAAAACATTGATTTTTTTTTTTTTTATCGAGCTATTACTTAAAAGAGTTGGGACCTCGCAAATCGACTTCTTCTCTTTTCTCTGTGCGCATCACAACCGACCCTTCTCTCTCTCCGCACGTCATCGTCTTCACTCTTGCTTCCAGCTCGAGTCGATATCTGAACTTGGATTGTTTGAAGCATTGACAATGTCAACGTCATACCTCCCAGCAACAACGGATTCAATTGCTCTGGCTTTGGAGGCCAAAGCTCCATCTGAAGCCATAGCTATTCTGTATCGTATTCTTGAAAACCCATCCACTTCTTCCGAAGCTCTACGCATAAAGGAACAGACCATCACCAATCTGTCAGATCTTCTTAGACAAGAGAATCGGGGAGAAGATCTTCGTAACCTTCTTACCCAGTTGAGGCCTTTCTTTAGCTTGATTCCAAAGGCAAAAACTGCAAAGATTGTTCGTGGCATAATAGATACAGTAGCTAAAATACCCGGCACATCTGAACTTCAGATTTCCCTTTGCAAAGACATGGTGCAGTGGACTCGTGCTGAGAAGCGAACTTTCCTTCGGCAGCGAGTGGAGGCCAGGCTTGCAGCTCTTTTGTTGGAAAGCAAGGAGTACTCAGAAGCACTAACTCTCCTCTCTACCTTGATCAAAGAAGTGAGAAGGCTAGATGACAAGCTTCTCCTTGTGGACATAGATCTGTTGGAGAGTAAGCTTCACTTTTCTTTGAGAAATCTCCCTAAAGCCAAGGCTTCACTGACTGCAGCTAGAACAGCAGCCAATTCTATCTATGTGCCTCCAGCTCAACAGGGAACTATTGATTTGCAGAGTGGCATCCTTCATGCAGAAGAAAAAGACTACAAAACTGCTTACAGTTATTTCTTTGAAGCATTTGAAGCCTTCAATGCTCTTGAGGATCCCCGGGCTGTCTTTAGCCTCAAGTATATGTTGTTGTGCAAAATCATGGTGAGCCAGGCTGATGATGTGGCAGGAATTATATCATCCAAAGCAGGCTTGCAGTACGTTGGGCCTGAGCTTGATGCCATGAAGGCAGTGGCTGATGCTCACTCGAAGCGCTCTTTAAAGCTTTTTGAGACTGCTTTGCGGGATTATAAGGCGCAGCTAGAGGAAGACCCTATTGTCCACAGGCACCTGTCTTCCCTGTATGACACTCTGTTAGAACAGAATCTCTGCAGGTTGATTGAGCCTTTCTCAAGGGTGGAAATAGCTCATATTGCAGAACTGATTGAACTCCCTGTTGACCACGTGGAGAAGAAGCTGTCTCAAATGATTCTTGATAAGAAATTTGCAGGAACTTTGGATCAGGGTGCTGGCTGCCTCATCATTTTTGAGGATCTCAAGACCGACGCCATATACCCTGCTACGCTAGAAACCATATCCAACATGGGTAAGGTTGTTGATAGCCTCTATGTGAGGTCTGCCAAGATAATGGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000502 GO:0003674 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005838 GO:0005911 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008541 GO:0009056 GO:0009057 GO:0009506 GO:0009987 GO:0010035 GO:0010038 GO:0016043 GO:0019538 GO:0019941 GO:0022607 GO:0022624 GO:0030054 GO:0030154 GO:0030163 GO:0032502 GO:0032991 GO:0034622 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043248 GO:0043632 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048863 GO:0048869 GO:0050896 GO:0051603 GO:0055044 GO:0065003 GO:0071704 GO:0071840 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369

KEGG Pathways

Metabolic & Signaling

ko03050 ko05169 map03050 map05169

Pfam Domains

Protein Families

PCI

Protein Analysis

499

Amino Acids

56.11

Weight (kDa)

7.17

Isoelectric Point (pI)

42.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPN6_N	PF18055	93 - 205	6e-34	26S proteasome regulatory subunit RPN6 N-terminal domain
PCI	PF01399	382 - 464	1e-21	PCI domain
RPN6_C_helix	PF18503	470 - 495	1.1e-12	26S proteasome subunit RPN6 C-terminal helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29150 AT1G29150
fragaria_vesca	FvH4_4g30750
malus_domestica	MD13G1068400.v1.1 MD16G1067200.v1.1
prunus_persica	Prupe.1G279500_v2.0.a1
pyrus_communis	pycom13g06020
rosa_chinensis	RchiOBHm_Chr4g0439141 RchiOBHm_Chr6g0255431
rosa_laevigata	RLG00000006294
rosa_multiflora	Rmu_sc0002236.1_g000002 Rmu_sc0027506.1_g000003
rosa_roxburghii	Rroxscaffold_5G00380130
rosa_rugosa	Rorug04G0316000
rosa_samantha	Rh4AG366900 Rh4BG378400 Rh4CG392700 Rh4DG373000
rosa_wichuraiana	Rw0G007510 Rw0G011720 Rw6G006640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1155
AasI	GACNNNNNNGTC	1 cut(s)	1181
Acc16I	TGCGCA	1 cut(s)	132
Acc36I	ACCTGC	1 cut(s)	1227
AccB1I	GGYRCC	1 cut(s)	1191
AciI	CCGC	2 cut(s)	159, 1147
AclWI	GGATC	4 cut(s)	953, 966, 1371, 1404
AcsI	RAATTY	2 cut(s)	15, 1346
AcuI	CTGAAG	2 cut(s)	321, 530
AcvI	CACGTG	1 cut(s)	1309
AcyI	GRCGYC	1 cut(s)	1410
AfaI	GTAC	2 cut(s)	659, 1064
AfeI	AGCGCT	1 cut(s)	1118
AfiI	CCNNNNNNNGG	1 cut(s)	450
AgsI	TTSAA	7 cut(s)	221, 267, 332, 929, 938, 946, 1292
AjiI	CACGTC	1 cut(s)	164
AjnI	CCWGG	2 cut(s)	623, 1014
Alw26I	GTCTC	2 cut(s)	1130, 1329
AlwI	GGATC	4 cut(s)	953, 966, 1371, 1404
AlwNI	CAGNNNCTG	1 cut(s)	1100
Ama87I	CYCGRG	2 cut(s)	191, 963
Aor51HI	AGCGCT	1 cut(s)	1118
AoxI	GGCC	4 cut(s)	285, 452, 621, 1070
ApeKI	GCWGC	6 cut(s)	610, 632, 806, 818, 1162, 1377
ApoI	RAATTY	2 cut(s)	15, 1346
Asp700I	GAANNNNTTC	1 cut(s)	426
AspLEI	GCGC	3 cut(s)	133, 1119, 1162
AspS9I	GGNCC	3 cut(s)	4, 96, 1070
AsuC2I	CCSGG	3 cut(s)	531, 964, 965
AsuHPI	GGTGA	2 cut(s)	373, 1021
AvaI	CYCGRG	2 cut(s)	191, 963
AvaII	GGWCC	2 cut(s)	4, 96
BamHI	GGATCC	1 cut(s)	958
BanI	GGYRCC	1 cut(s)	1191
BauI	CACGAG	1 cut(s)	582
BbrPI	CACGTG	1 cut(s)	1309
BbsI	GAAGAC	3 cut(s)	164, 1179, 1191
BbvI	GCAGC	6 cut(s)	622, 644, 818, 830, 1174, 1364
BccI	CCATC	3 cut(s)	304, 346, 386
BcgI	CGANNNNNNTGC	2 cut(s)	563, 597
BciT130I	CCWGG	2 cut(s)	625, 1016
BclI	TGATCA	1 cut(s)	690
BcnI	CCSGG	3 cut(s)	531, 964, 965
BcoDI	GTCTC	2 cut(s)	1130, 1329
BfaI	CTAG	4 cut(s)	710, 810, 1166, 1430
BfmI	CTRYAG	2 cut(s)	804, 1234
BfoI	RGCGCY	1 cut(s)	1120
BfuAI	ACCTGC	1 cut(s)	1227
BglI	GCCNNNNNGGC	1 cut(s)	1091
BglII	AGATCT	3 cut(s)	394, 424, 739
BisI	GCNGC	6 cut(s)	611, 633, 807, 819, 1163, 1378
BlsI	GCNGC	6 cut(s)	612, 634, 808, 820, 1164, 1379
BmcAI	AGTACT	1 cut(s)	659
Bme1390I	CCNGG	5 cut(s)	531, 625, 964, 965, 1016
Bme18I	GGWCC	2 cut(s)	4, 96
BmeT110I	CYCGRG	2 cut(s)	191, 963
BmgBI	CACGTC	1 cut(s)	164
BmgT120I	GGNCC	3 cut(s)	4, 96, 1070
BmiI	GGNNCC	3 cut(s)	97, 960, 1193
BmrFI	CCNGG	5 cut(s)	531, 625, 964, 965, 1016
BmrI	ACTGGG	1 cut(s)	439
BmsI	GCATC	4 cut(s)	142, 885, 1072, 1093
BmuI	ACTGGG	1 cut(s)	439
BpiI	GAAGAC	3 cut(s)	164, 1179, 1191
BplI	GAGNNNNNCTC	2 cut(s)	1238, 1270
BpmI	CTGGAG	1 cut(s)	825
Bpu10I	CCTNAGC	1 cut(s)	1074
BpuEI	CTTGAG	4 cut(s)	965, 974, 1240, 1385
BpuMI	CCSGG	3 cut(s)	531, 964, 965
BsaAI	YACGTR	1 cut(s)	1309
BsaHI	GRCGYC	1 cut(s)	1410
BsaJI	CCNNGG	3 cut(s)	789, 962, 963
BsaXI	ACNNNNNCTCC	2 cut(s)	660, 690
Bsc4I	CCNNNNNNNGG	1 cut(s)	450
Bse1I	ACTGG	1 cut(s)	445
BseBI	CCWGG	2 cut(s)	625, 1016
BseDI	CCNNGG	3 cut(s)	789, 962, 963
BseGI	GGATG	3 cut(s)	338, 876, 1043
BseLI	CCNNNNNNNGG	1 cut(s)	450
BseMII	CTCAG	3 cut(s)	579, 675, 1065
BseNI	ACTGG	1 cut(s)	445
BseRI	GAGGAG	1 cut(s)	668
BseXI	GCAGC	6 cut(s)	622, 644, 818, 830, 1174, 1364
BseYI	CCCAGC	1 cut(s)	250
BsgI	GTGCAG	1 cut(s)	593
BshFI	GGCC	4 cut(s)	287, 454, 623, 1072
BshNI	GGYRCC	1 cut(s)	1191
BsiHKCI	CYCGRG	2 cut(s)	191, 963
BsiSI	CCGG	2 cut(s)	531, 964
BslFI	GGGAC	1 cut(s)	109
BslI	CCNNNNNNNGG	1 cut(s)	450
BsmAI	GTCTC	2 cut(s)	1130, 1329
BsmFI	GGGAC	1 cut(s)	109
BsnI	GGCC	4 cut(s)	287, 454, 623, 1072
BsoBI	CYCGRG	2 cut(s)	191, 963
Bsp143I	GATC	7 cut(s)	394, 424, 690, 739, 958, 1363, 1396
BspACI	CCGC	2 cut(s)	159, 1147
BspANI	GGCC	4 cut(s)	287, 454, 623, 1072
BspCNI	CTCAG	3 cut(s)	580, 674, 1066
BspLI	GGNNCC	3 cut(s)	97, 960, 1193
BspMAI	CTGCAG	2 cut(s)	808, 1238
BspMI	ACCTGC	1 cut(s)	1227
BspPI	GGATC	4 cut(s)	953, 966, 1371, 1404
BspT107I	GGYRCC	1 cut(s)	1191
BsrI	ACTGG	1 cut(s)	445
BssECI	CCNNGG	3 cut(s)	789, 962, 963
BssMI	GATC	7 cut(s)	394, 424, 690, 739, 958, 1363, 1396
BssNI	GRCGYC	1 cut(s)	1410
BssSI	CACGAG	1 cut(s)	582
BssT1I	CCWWGG	1 cut(s)	789
Bst2BI	CACGAG	1 cut(s)	582
Bst2UI	CCWGG	2 cut(s)	625, 1016
Bst4CI	ACNGT	2 cut(s)	517, 917
BstACI	GRCGYC	1 cut(s)	1410
BstAPI	GCANNNNNTGC	1 cut(s)	485
BstBAI	YACGTR	1 cut(s)	1309
BstC8I	GCNNGC	4 cut(s)	630, 1054, 1058, 1375
BstDEI	CTNAG	4 cut(s)	401, 588, 661, 1074
BstF5I	GGATG	3 cut(s)	338, 876, 1043
BstH2I	RGCGCY	1 cut(s)	1120
BstHHI	GCGC	3 cut(s)	133, 1119, 1162
BstKTI	GATC	7 cut(s)	397, 427, 693, 742, 961, 1366, 1399
BstMAI	GTCTC	2 cut(s)	1130, 1329
BstMBI	GATC	7 cut(s)	394, 424, 690, 739, 958, 1363, 1396
BstMWI	GCNNNNNNNGC	8 cut(s)	284, 485, 629, 815, 938, 947, 1091, 1277
BstNI	CCWGG	2 cut(s)	625, 1016
BstSCI	CCNGG	5 cut(s)	529, 623, 962, 963, 1014
BstSFI	CTRYAG	2 cut(s)	804, 1234
BstV1I	GCAGC	6 cut(s)	622, 644, 818, 830, 1174, 1364
BstV2I	GAAGAC	3 cut(s)	164, 1179, 1191
BstX2I	RGATCY	5 cut(s)	394, 424, 739, 958, 1396
BstXI	CCANNNNNNTGG	1 cut(s)	1492
BstYI	RGATCY	5 cut(s)	394, 424, 739, 958, 1396
BsuRI	GGCC	4 cut(s)	287, 454, 623, 1072
BtrI	CACGTC	1 cut(s)	164
BtsCI	GGATG	3 cut(s)	338, 876, 1043
BtsI	GCAGTG	2 cut(s)	581, 1101
BtsIMutI	CAGTG	3 cut(s)	581, 797, 1101
BveI	ACCTGC	1 cut(s)	1227
Cac8I	GCNNGC	4 cut(s)	630, 1054, 1058, 1375
CaiI	CAGNNNCTG	1 cut(s)	1100
CfoI	GCGC	3 cut(s)	133, 1119, 1162
Cfr13I	GGNCC	3 cut(s)	4, 96, 1070
Cfr9I	CCCGGG	1 cut(s)	963
CseI	GACGC	1 cut(s)	1418
Csp6I	GTAC	2 cut(s)	658, 1063
CviAII	CATG	6 cut(s)	568, 884, 1006, 1087, 1447, 1497
CviQI	GTAC	2 cut(s)	658, 1063
DdeI	CTNAG	4 cut(s)	401, 588, 661, 1074
DpnI	GATC	7 cut(s)	396, 426, 692, 741, 960, 1365, 1398
DpnII	GATC	7 cut(s)	394, 424, 690, 739, 958, 1363, 1396
DraI	TTTAAA	1 cut(s)	1125
DrdI	GACNNNNNNGTC	1 cut(s)	1181
DseDI	GACNNNNNNGTC	1 cut(s)	1181
Eco130I	CCWWGG	1 cut(s)	789
Eco147I	AGGCCT	1 cut(s)	454
Eco32I	GATATC	1 cut(s)	201
Eco47I	GGWCC	2 cut(s)	4, 96
Eco47III	AGCGCT	1 cut(s)	1118
Eco57I	CTGAAG	2 cut(s)	321, 530
Eco72I	CACGTG	1 cut(s)	1309
Eco88I	CYCGRG	2 cut(s)	191, 963
EcoO109I	RGGNCCY	1 cut(s)	96
EcoRII	CCWGG	2 cut(s)	623, 1014
EcoRV	GATATC	1 cut(s)	201
EcoT14I	CCWWGG	1 cut(s)	789
ErhI	CCWWGG	1 cut(s)	789
FaeI	CATG	6 cut(s)	571, 887, 1009, 1090, 1450, 1500
FalI	AAGNNNNNCTT	2 cut(s)	746, 778
FaqI	GGGAC	1 cut(s)	109
FatI	CATG	6 cut(s)	567, 883, 1005, 1086, 1446, 1496
FauI	CCCGC	1 cut(s)	1140
FbaI	TGATCA	1 cut(s)	690
Fnu4HI	GCNGC	6 cut(s)	611, 633, 807, 819, 1163, 1378
FokI	GGATG	3 cut(s)	325, 863, 1030
Fsp4HI	GCNGC	6 cut(s)	611, 633, 807, 819, 1163, 1378
FspAI	RTGCGCAY	1 cut(s)	132
FspBI	CTAG	4 cut(s)	710, 810, 1166, 1430
FspI	TGCGCA	1 cut(s)	132
GlaI	GCGC	3 cut(s)	132, 1118, 1161
GluI	GCNGC	6 cut(s)	611, 633, 807, 819, 1163, 1378
GsaI	CCCAGC	1 cut(s)	254
GsuI	CTGGAG	1 cut(s)	825
HaeII	RGCGCY	1 cut(s)	1120
HaeIII	GGCC	4 cut(s)	287, 454, 623, 1072
HapII	CCGG	2 cut(s)	531, 964
HgaI	GACGC	1 cut(s)	1418
HhaI	GCGC	3 cut(s)	133, 1119, 1162
Hin1I	GRCGYC	1 cut(s)	1410
Hin1II	CATG	6 cut(s)	571, 887, 1009, 1090, 1450, 1500
Hin6I	GCGC	3 cut(s)	131, 1117, 1160
HinP1I	GCGC	3 cut(s)	131, 1117, 1160
HincII	GTYRAC	2 cut(s)	237, 1303
HindII	GTYRAC	2 cut(s)	237, 1303
HindIII	AAGCTT	3 cut(s)	719, 755, 1127
HinfI	GANTC	7 cut(s)	194, 263, 412, 469, 580, 1228, 1333
HpaII	CCGG	2 cut(s)	531, 964
HphI	GGTGA	2 cut(s)	373, 1021
Hpy166II	GTNNAC	5 cut(s)	237, 579, 733, 1186, 1303
Hpy188I	TCNGA	7 cut(s)	205, 301, 352, 394, 541, 549, 664
Hpy188III	TCNNGA	4 cut(s)	329, 953, 1337, 1402
Hpy8I	GTNNAC	5 cut(s)	237, 579, 733, 1186, 1303
Hpy99I	CGWCG	1 cut(s)	1412
HpyAV	CCTTC	7 cut(s)	157, 446, 614, 699, 890, 952, 1084
HpyCH4III	ACNGT	2 cut(s)	517, 917
HpyCH4IV	ACGT	4 cut(s)	163, 239, 1065, 1308
HpyF10VI	GCNNNNNNNGC	8 cut(s)	284, 485, 629, 815, 938, 947, 1091, 1277
HpyF3I	CTNAG	4 cut(s)	401, 588, 661, 1074
HpySE526I	ACGT	4 cut(s)	163, 239, 1065, 1308
Hsp92I	GRCGYC	1 cut(s)	1410
Hsp92II	CATG	6 cut(s)	571, 887, 1009, 1090, 1450, 1500
HspAI	GCGC	3 cut(s)	131, 1117, 1160
Ksp22I	TGATCA	1 cut(s)	690
Kzo9I	GATC	7 cut(s)	394, 424, 690, 739, 958, 1363, 1396
LmnI	GCTCC	1 cut(s)	298
Lsp1109I	GCAGC	6 cut(s)	622, 644, 818, 830, 1174, 1364
LweI	GCATC	4 cut(s)	142, 885, 1072, 1093
MaeI	CTAG	4 cut(s)	710, 810, 1166, 1430
MaeII	ACGT	4 cut(s)	163, 239, 1065, 1308
MaeIII	GTNAC	1 cut(s)	431
MalI	GATC	7 cut(s)	396, 426, 692, 741, 960, 1365, 1398
MboI	GATC	7 cut(s)	394, 424, 690, 739, 958, 1363, 1396
MfeI	CAATTG	1 cut(s)	267
MflI	RGATCY	5 cut(s)	394, 424, 739, 958, 1396
MluCI	AATT	5 cut(s)	15, 267, 823, 1035, 1346
MlyI	GAGTC	2 cut(s)	203, 574
MmeI	TCCRAC	3 cut(s)	624, 726, 1467
MroXI	GAANNNNTTC	1 cut(s)	426
MseI	TTAA	2 cut(s)	84, 1124
MspI	CCGG	2 cut(s)	531, 964
MspR9I	CCNGG	5 cut(s)	531, 625, 964, 965, 1016
MunI	CAATTG	1 cut(s)	267
MvaI	CCWGG	2 cut(s)	625, 1016
MwoI	GCNNNNNNNGC	8 cut(s)	284, 485, 629, 815, 938, 947, 1091, 1277
NciI	CCSGG	3 cut(s)	531, 964, 965
NdeII	GATC	7 cut(s)	394, 424, 690, 739, 958, 1363, 1396
NlaIII	CATG	6 cut(s)	571, 887, 1009, 1090, 1450, 1500
NlaIV	GGNNCC	3 cut(s)	97, 960, 1193
NsbI	TGCGCA	1 cut(s)	132
PaeR7I	CTCGAG	1 cut(s)	191
PceI	AGGCCT	1 cut(s)	454
PdmI	GAANNNNTTC	1 cut(s)	426
PfeI	GAWTC	5 cut(s)	263, 412, 469, 1228, 1333
PflFI	GACNNNGTC	1 cut(s)	232
PkrI	GCNGC	6 cut(s)	612, 634, 808, 820, 1164, 1379
PleI	GAGTC	2 cut(s)	202, 574
PmaCI	CACGTG	1 cut(s)	1309
PmlI	CACGTG	1 cut(s)	1309
PpsI	GAGTC	2 cut(s)	202, 574
Ppu21I	YACGTR	1 cut(s)	1309
PpuMI	RGGWCCY	1 cut(s)	96
PsiI	TTATAA	1 cut(s)	1155
Psp5II	RGGWCCY	1 cut(s)	96
Psp6I	CCWGG	2 cut(s)	623, 1014
PspCI	CACGTG	1 cut(s)	1309
PspFI	CCCAGC	1 cut(s)	250
PspGI	CCWGG	2 cut(s)	623, 1014
PspN4I	GGNNCC	3 cut(s)	97, 960, 1193
PspPI	GGNCC	3 cut(s)	4, 96, 1070
PspPPI	RGGWCCY	1 cut(s)	96
PspXI	VCTCGAGB	1 cut(s)	191
PstI	CTGCAG	2 cut(s)	808, 1238
PstNI	CAGNNNCTG	1 cut(s)	1100
PsuI	RGATCY	5 cut(s)	394, 424, 739, 958, 1396
PsyI	GACNNNGTC	1 cut(s)	232
RsaI	GTAC	2 cut(s)	659, 1064
RsaNI	GTAC	2 cut(s)	658, 1063
SaqAI	TTAA	2 cut(s)	84, 1124
SatI	GCNGC	6 cut(s)	611, 633, 807, 819, 1163, 1378
Sau3AI	GATC	7 cut(s)	394, 424, 690, 739, 958, 1363, 1396
Sau96I	GGNCC	3 cut(s)	4, 96, 1070
ScaI	AGTACT	1 cut(s)	659
SchI	GAGTC	2 cut(s)	203, 574
ScrFI	CCNGG	5 cut(s)	531, 625, 964, 965, 1016
SfaNI	GCATC	4 cut(s)	142, 885, 1072, 1093
SfcI	CTRYAG	2 cut(s)	804, 1234
Sfr274I	CTCGAG	1 cut(s)	191
SinI	GGWCC	2 cut(s)	4, 96
SlaI	CTCGAG	1 cut(s)	191
SmaI	CCCGGG	1 cut(s)	965
SmlI	CTYRAG	5 cut(s)	191, 953, 980, 1255, 1400
SmoI	CTYRAG	5 cut(s)	191, 953, 980, 1255, 1400
Sse9I	AATT	5 cut(s)	15, 267, 823, 1035, 1346
SseBI	AGGCCT	1 cut(s)	454
SsiI	CCGC	2 cut(s)	159, 1147
SspMI	CTAG	4 cut(s)	710, 810, 1166, 1430
StuI	AGGCCT	1 cut(s)	454
StyD4I	CCNGG	5 cut(s)	529, 623, 962, 963, 1014
StyI	CCWWGG	1 cut(s)	789
TaaI	ACNGT	2 cut(s)	517, 917
TaiI	ACGT	4 cut(s)	166, 242, 1068, 1311
TaqI	TCGA	5 cut(s)	72, 108, 192, 197, 1112
TaqII	GACCGA	1 cut(s)	1421
TasI	AATT	5 cut(s)	15, 267, 823, 1035, 1346
TatI	WGTACW	1 cut(s)	657
TfiI	GAWTC	5 cut(s)	263, 412, 469, 1228, 1333
Tru1I	TTAA	2 cut(s)	84, 1124
Tru9I	TTAA	2 cut(s)	84, 1124
TscAI	CASTG	3 cut(s)	581, 804, 1101
TseI	GCWGC	6 cut(s)	610, 632, 806, 818, 1162, 1377
TspDTI	ATGAA	2 cut(s)	872, 1103
TspGWI	ACGGA	1 cut(s)	275
TspMI	CCCGGG	1 cut(s)	963
TspRI	CASTG	3 cut(s)	581, 804, 1101
Tth111I	GACNNNGTC	1 cut(s)	232
VpaK11BI	GGWCC	2 cut(s)	4, 96
XapI	RAATTY	2 cut(s)	15, 1346
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1093, 1444
XhoI	CTCGAG	1 cut(s)	191
XmaI	CCCGGG	1 cut(s)	963
XmnI	GAANNNNTTC	1 cut(s)	426
XspI	CTAG	4 cut(s)	710, 810, 1166, 1430
ZrmI	AGTACT	1 cut(s)	659

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.