Copper-transporting ATPase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1288500.v1.1 |
| rosa_chinensis | RchiOBHm_Chr3g0494461 RchiOBHm_Chr5g0017581 |
| rosa_laevigata | RLG00000022668 |
| rosa_multiflora | Rmu_sc0004142.1_g000030 Rmu_sc0004904.1_g000014 Rmu_sc0005381.1_g000001 Rmu_sc0006413.1_g000025 |
| rosa_roxburghii | Rroxscaffold_4G00314810 |
| rosa_samantha | Rh3BG323700 Rh5DG520900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 141 |
| AcsI | RAATTY | 1 cut(s) | 368 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AgsI | TTSAA | 4 cut(s) | 107, 123, 268, 476 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 52, 84 |
| AluBI | AGCT | 8 cut(s) | 56, 128, 164, 264, 275, 410, 428, 462 |
| AluI | AGCT | 8 cut(s) | 56, 128, 164, 264, 275, 410, 428, 462 |
| AoxI | GGCC | 2 cut(s) | 88, 236 |
| ApeKI | GCWGC | 1 cut(s) | 428 |
| ApoI | RAATTY | 1 cut(s) | 368 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 18 |
| AspS9I | GGNCC | 2 cut(s) | 131, 236 |
| AvaII | GGWCC | 1 cut(s) | 131 |
| BbvI | GCAGC | 1 cut(s) | 415 |
| BccI | CCATC | 2 cut(s) | 56, 236 |
| BciVI | GTATCC | 1 cut(s) | 73 |
| BfaI | CTAG | 2 cut(s) | 272, 417 |
| BfmI | CTRYAG | 2 cut(s) | 339, 429 |
| BfuI | GTATCC | 1 cut(s) | 73 |
| BisI | GCNGC | 1 cut(s) | 429 |
| BlsI | GCNGC | 1 cut(s) | 430 |
| Bme18I | GGWCC | 1 cut(s) | 131 |
| BmgT120I | GGNCC | 2 cut(s) | 131, 236 |
| BmsI | GCATC | 1 cut(s) | 445 |
| BpmI | CTGGAG | 1 cut(s) | 426 |
| BpuEI | CTTGAG | 1 cut(s) | 69 |
| Bse3DI | GCAATG | 2 cut(s) | 251, 453 |
| BseGI | GGATG | 1 cut(s) | 286 |
| BseMI | GCAATG | 2 cut(s) | 251, 453 |
| BseMII | CTCAG | 2 cut(s) | 66, 174 |
| BseXI | GCAGC | 1 cut(s) | 415 |
| BseYI | CCCAGC | 1 cut(s) | 233 |
| BshFI | GGCC | 2 cut(s) | 90, 238 |
| BslFI | GGGAC | 1 cut(s) | 329 |
| BsmFI | GGGAC | 1 cut(s) | 329 |
| BsnI | GGCC | 2 cut(s) | 90, 238 |
| BspANI | GGCC | 2 cut(s) | 90, 238 |
| BspCNI | CTCAG | 2 cut(s) | 65, 173 |
| BspMAI | CTGCAG | 1 cut(s) | 433 |
| BsrDI | GCAATG | 2 cut(s) | 251, 453 |
| BssNAI | GTATAC | 1 cut(s) | 142 |
| Bst1107I | GTATAC | 1 cut(s) | 142 |
| Bst4CI | ACNGT | 1 cut(s) | 301 |
| Bst6I | CTCTTC | 1 cut(s) | 318 |
| BstDEI | CTNAG | 2 cut(s) | 52, 160 |
| BstF5I | GGATG | 1 cut(s) | 286 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 341 |
| BstSFI | CTRYAG | 2 cut(s) | 339, 429 |
| BstV1I | GCAGC | 1 cut(s) | 415 |
| BstZ17I | GTATAC | 1 cut(s) | 142 |
| BsuI | GTATCC | 1 cut(s) | 73 |
| BsuRI | GGCC | 2 cut(s) | 90, 238 |
| BtsCI | GGATG | 1 cut(s) | 286 |
| Cfr13I | GGNCC | 2 cut(s) | 131, 236 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviAII | CATG | 2 cut(s) | 92, 440 |
| CviQI | GTAC | 1 cut(s) | 184 |
| DdeI | CTNAG | 2 cut(s) | 52, 160 |
| Eam1104I | CTCTTC | 1 cut(s) | 318 |
| EarI | CTCTTC | 1 cut(s) | 318 |
| Eco47I | GGWCC | 1 cut(s) | 131 |
| FaeI | CATG | 2 cut(s) | 95, 443 |
| FaiI | YATR | 7 cut(s) | 93, 142, 149, 201, 341, 441, 454 |
| FaqI | GGGAC | 1 cut(s) | 329 |
| FatI | CATG | 2 cut(s) | 91, 439 |
| FblI | GTMKAC | 1 cut(s) | 141 |
| Fnu4HI | GCNGC | 1 cut(s) | 429 |
| FokI | GGATG | 1 cut(s) | 293 |
| Fsp4HI | GCNGC | 1 cut(s) | 429 |
| FspBI | CTAG | 2 cut(s) | 272, 417 |
| GluI | GCNGC | 1 cut(s) | 429 |
| GsaI | CCCAGC | 1 cut(s) | 237 |
| GsuI | CTGGAG | 1 cut(s) | 426 |
| HaeIII | GGCC | 2 cut(s) | 90, 238 |
| Hin1II | CATG | 2 cut(s) | 95, 443 |
| HindIII | AAGCTT | 1 cut(s) | 262 |
| HinfI | GANTC | 5 cut(s) | 14, 119, 154, 248, 388 |
| Hpy166II | GTNNAC | 1 cut(s) | 142 |
| Hpy188I | TCNGA | 1 cut(s) | 296 |
| Hpy188III | TCNNGA | 2 cut(s) | 209, 405 |
| Hpy8I | GTNNAC | 1 cut(s) | 142 |
| HpyCH4III | ACNGT | 1 cut(s) | 301 |
| HpyCH4V | TGCA | 3 cut(s) | 335, 431, 446 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 341 |
| HpyF3I | CTNAG | 2 cut(s) | 52, 160 |
| Hsp92II | CATG | 2 cut(s) | 95, 443 |
| LmnI | GCTCC | 1 cut(s) | 407 |
| Lsp1109I | GCAGC | 1 cut(s) | 415 |
| LweI | GCATC | 1 cut(s) | 445 |
| MaeI | CTAG | 2 cut(s) | 272, 417 |
| MaeIII | GTNAC | 1 cut(s) | 467 |
| MboII | GAAGA | 1 cut(s) | 335 |
| MluCI | AATT | 3 cut(s) | 67, 102, 368 |
| MlyI | GAGTC | 2 cut(s) | 148, 382 |
| MmeI | TCCRAC | 1 cut(s) | 334 |
| MnlI | CCTC | 2 cut(s) | 70, 319 |
| MroXI | GAANNNNTTC | 1 cut(s) | 18 |
| MseI | TTAA | 3 cut(s) | 30, 260, 423 |
| MslI | CAYNNNNRTG | 1 cut(s) | 149 |
| MspA1I | CMGCKG | 1 cut(s) | 56 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 341 |
| NlaIII | CATG | 2 cut(s) | 95, 443 |
| PdmI | GAANNNNTTC | 1 cut(s) | 18 |
| PfeI | GAWTC | 3 cut(s) | 14, 119, 248 |
| PkrI | GCNGC | 1 cut(s) | 430 |
| PleI | GAGTC | 2 cut(s) | 148, 382 |
| PpsI | GAGTC | 2 cut(s) | 148, 382 |
| PspFI | CCCAGC | 1 cut(s) | 233 |
| PspPI | GGNCC | 2 cut(s) | 131, 236 |
| PstI | CTGCAG | 1 cut(s) | 433 |
| PvuII | CAGCTG | 1 cut(s) | 56 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| RseI | CAYNNNNRTG | 1 cut(s) | 149 |
| SaqAI | TTAA | 3 cut(s) | 30, 260, 423 |
| SatI | GCNGC | 1 cut(s) | 429 |
| Sau96I | GGNCC | 2 cut(s) | 131, 236 |
| SchI | GAGTC | 2 cut(s) | 148, 382 |
| SetI | ASST | 9 cut(s) | 58, 130, 136, 166, 266, 277, 412, 430, 464 |
| SfaNI | GCATC | 1 cut(s) | 445 |
| SfcI | CTRYAG | 2 cut(s) | 339, 429 |
| SinI | GGWCC | 1 cut(s) | 131 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 149 |
| SmlI | CTYRAG | 1 cut(s) | 84 |
| SmoI | CTYRAG | 1 cut(s) | 84 |
| Sse9I | AATT | 3 cut(s) | 67, 102, 368 |
| SspMI | CTAG | 2 cut(s) | 272, 417 |
| TaaI | ACNGT | 1 cut(s) | 301 |
| TasI | AATT | 3 cut(s) | 67, 102, 368 |
| TfiI | GAWTC | 3 cut(s) | 14, 119, 248 |
| Tru1I | TTAA | 3 cut(s) | 30, 260, 423 |
| Tru9I | TTAA | 3 cut(s) | 30, 260, 423 |
| TseI | GCWGC | 1 cut(s) | 428 |
| TspDTI | ATGAA | 3 cut(s) | 54, 108, 240 |
| VpaK11BI | GGWCC | 1 cut(s) | 131 |
| XapI | RAATTY | 1 cut(s) | 368 |
| XmiI | GTMKAC | 1 cut(s) | 141 |
| XmnI | GAANNNNTTC | 1 cut(s) | 18 |
| XspI | CTAG | 2 cut(s) | 272, 417 |