Copper-transporting ATPase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1288500.v1.1 |
| rosa_chinensis | RchiOBHm_Chr3g0494461 RchiOBHm_Chr5g0017581 |
| rosa_laevigata | RLG00000022668 |
| rosa_multiflora | Rmu_sc0004142.1_g000030 Rmu_sc0004904.1_g000014 Rmu_sc0005381.1_g000001 Rmu_sc0006413.1_g000025 |
| rosa_roxburghii | Rroxscaffold_4G00314810 |
| rosa_samantha | Rh3BG323700 Rh5DG520900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 279 |
| AfaI | GTAC | 1 cut(s) | 323 |
| AgsI | TTSAA | 6 cut(s) | 161, 171, 186, 245, 261, 406 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 121, 153 |
| AluBI | AGCT | 5 cut(s) | 125, 266, 302, 402, 413 |
| AluI | AGCT | 5 cut(s) | 125, 266, 302, 402, 413 |
| Alw26I | GTCTC | 1 cut(s) | 124 |
| AoxI | GGCC | 2 cut(s) | 226, 374 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 87 |
| AspS9I | GGNCC | 3 cut(s) | 146, 269, 374 |
| AsuHPI | GGTGA | 1 cut(s) | 439 |
| AvaII | GGWCC | 2 cut(s) | 146, 269 |
| BccI | CCATC | 2 cut(s) | 137, 374 |
| BcoDI | GTCTC | 1 cut(s) | 124 |
| BfaI | CTAG | 1 cut(s) | 410 |
| BfmI | CTRYAG | 1 cut(s) | 414 |
| Bme18I | GGWCC | 2 cut(s) | 146, 269 |
| BmgT120I | GGNCC | 3 cut(s) | 146, 269, 374 |
| BmiI | GGNNCC | 1 cut(s) | 178 |
| BmsI | GCATC | 1 cut(s) | 208 |
| BpuEI | CTTGAG | 1 cut(s) | 207 |
| Bse1I | ACTGG | 1 cut(s) | 178 |
| BseGI | GGATG | 3 cut(s) | 67, 148, 223 |
| BseMII | CTCAG | 3 cut(s) | 135, 143, 312 |
| BseNI | ACTGG | 1 cut(s) | 178 |
| BseYI | CCCAGC | 1 cut(s) | 371 |
| BshFI | GGCC | 2 cut(s) | 228, 376 |
| BsmAI | GTCTC | 1 cut(s) | 124 |
| BsmBI | CGTCTC | 1 cut(s) | 124 |
| BsnI | GGCC | 2 cut(s) | 228, 376 |
| BspANI | GGCC | 2 cut(s) | 228, 376 |
| BspCNI | CTCAG | 3 cut(s) | 134, 144, 311 |
| BspLI | GGNNCC | 1 cut(s) | 178 |
| BsrI | ACTGG | 1 cut(s) | 178 |
| BssNAI | GTATAC | 1 cut(s) | 280 |
| Bst1107I | GTATAC | 1 cut(s) | 280 |
| Bst4CI | ACNGT | 1 cut(s) | 118 |
| Bst6I | CTCTTC | 1 cut(s) | 28 |
| BstC8I | GCNNGC | 1 cut(s) | 252 |
| BstDEI | CTNAG | 3 cut(s) | 121, 152, 298 |
| BstF5I | GGATG | 3 cut(s) | 67, 148, 223 |
| BstMAI | GTCTC | 1 cut(s) | 124 |
| BstSFI | CTRYAG | 1 cut(s) | 414 |
| BstZ17I | GTATAC | 1 cut(s) | 280 |
| BsuRI | GGCC | 2 cut(s) | 228, 376 |
| BtsCI | GGATG | 3 cut(s) | 67, 148, 223 |
| Cac8I | GCNNGC | 1 cut(s) | 252 |
| Cfr13I | GGNCC | 3 cut(s) | 146, 269, 374 |
| Csp6I | GTAC | 1 cut(s) | 322 |
| CviAII | CATG | 3 cut(s) | 70, 208, 230 |
| CviQI | GTAC | 1 cut(s) | 322 |
| DdeI | CTNAG | 3 cut(s) | 121, 152, 298 |
| Eam1104I | CTCTTC | 1 cut(s) | 28 |
| EarI | CTCTTC | 1 cut(s) | 28 |
| Eco47I | GGWCC | 2 cut(s) | 146, 269 |
| Esp3I | CGTCTC | 1 cut(s) | 124 |
| FaeI | CATG | 3 cut(s) | 73, 211, 233 |
| FaiI | YATR | 8 cut(s) | 15, 71, 209, 231, 280, 287, 339, 434 |
| FatI | CATG | 3 cut(s) | 69, 207, 229 |
| FblI | GTMKAC | 1 cut(s) | 279 |
| FokI | GGATG | 3 cut(s) | 74, 155, 230 |
| FspBI | CTAG | 1 cut(s) | 410 |
| GsaI | CCCAGC | 1 cut(s) | 375 |
| HaeIII | GGCC | 2 cut(s) | 228, 376 |
| Hin1II | CATG | 3 cut(s) | 73, 211, 233 |
| HindIII | AAGCTT | 1 cut(s) | 400 |
| HinfI | GANTC | 5 cut(s) | 65, 83, 257, 292, 386 |
| HphI | GGTGA | 1 cut(s) | 439 |
| Hpy166II | GTNNAC | 2 cut(s) | 280, 439 |
| Hpy188I | TCNGA | 1 cut(s) | 153 |
| Hpy188III | TCNNGA | 1 cut(s) | 347 |
| Hpy8I | GTNNAC | 2 cut(s) | 280, 439 |
| HpyCH4III | ACNGT | 1 cut(s) | 118 |
| HpyF3I | CTNAG | 3 cut(s) | 121, 152, 298 |
| Hsp92II | CATG | 3 cut(s) | 73, 211, 233 |
| LmnI | GCTCC | 1 cut(s) | 182 |
| LweI | GCATC | 1 cut(s) | 208 |
| MaeI | CTAG | 1 cut(s) | 410 |
| MboII | GAAGA | 2 cut(s) | 45, 60 |
| MluCI | AATT | 4 cut(s) | 136, 156, 181, 240 |
| MlyI | GAGTC | 2 cut(s) | 74, 286 |
| MnlI | CCTC | 2 cut(s) | 159, 208 |
| MroXI | GAANNNNTTC | 1 cut(s) | 87 |
| MseI | TTAA | 2 cut(s) | 99, 398 |
| MslI | CAYNNNNRTG | 1 cut(s) | 287 |
| MspA1I | CMGCKG | 1 cut(s) | 125 |
| NlaIII | CATG | 3 cut(s) | 73, 211, 233 |
| NlaIV | GGNNCC | 1 cut(s) | 178 |
| PdmI | GAANNNNTTC | 1 cut(s) | 87 |
| PfeI | GAWTC | 3 cut(s) | 83, 257, 386 |
| PleI | GAGTC | 2 cut(s) | 73, 286 |
| PpsI | GAGTC | 2 cut(s) | 73, 286 |
| PspFI | CCCAGC | 1 cut(s) | 371 |
| PspN4I | GGNNCC | 1 cut(s) | 178 |
| PspPI | GGNCC | 3 cut(s) | 146, 269, 374 |
| PvuII | CAGCTG | 1 cut(s) | 125 |
| RsaI | GTAC | 1 cut(s) | 323 |
| RsaNI | GTAC | 1 cut(s) | 322 |
| RseI | CAYNNNNRTG | 1 cut(s) | 287 |
| SaqAI | TTAA | 2 cut(s) | 99, 398 |
| Sau96I | GGNCC | 3 cut(s) | 146, 269, 374 |
| SchI | GAGTC | 2 cut(s) | 74, 286 |
| SetI | ASST | 6 cut(s) | 127, 268, 274, 304, 404, 415 |
| SfaNI | GCATC | 1 cut(s) | 208 |
| SfcI | CTRYAG | 1 cut(s) | 414 |
| SinI | GGWCC | 2 cut(s) | 146, 269 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 287 |
| SmlI | CTYRAG | 1 cut(s) | 222 |
| SmoI | CTYRAG | 1 cut(s) | 222 |
| Sse9I | AATT | 4 cut(s) | 136, 156, 181, 240 |
| SspMI | CTAG | 1 cut(s) | 410 |
| TaaI | ACNGT | 1 cut(s) | 118 |
| TasI | AATT | 4 cut(s) | 136, 156, 181, 240 |
| TfiI | GAWTC | 3 cut(s) | 83, 257, 386 |
| Tru1I | TTAA | 2 cut(s) | 99, 398 |
| Tru9I | TTAA | 2 cut(s) | 99, 398 |
| TspDTI | ATGAA | 2 cut(s) | 246, 378 |
| VpaK11BI | GGWCC | 2 cut(s) | 146, 269 |
| XmiI | GTMKAC | 1 cut(s) | 279 |
| XmnI | GAANNNNTTC | 1 cut(s) | 87 |
| XspI | CTAG | 1 cut(s) | 410 |