Copper-transporting ATPase
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1288500.v1.1 |
| rosa_chinensis | RchiOBHm_Chr3g0494461 RchiOBHm_Chr5g0017581 |
| rosa_laevigata | RLG00000022668 |
| rosa_multiflora | Rmu_sc0004142.1_g000030 Rmu_sc0004904.1_g000014 Rmu_sc0005381.1_g000001 Rmu_sc0006413.1_g000025 |
| rosa_roxburghii | Rroxscaffold_4G00314810 |
| rosa_samantha | Rh3BG323700 Rh5DG520900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 51 |
| AcoI | YGGCCR | 1 cut(s) | 106 |
| AcsI | RAATTY | 1 cut(s) | 344 |
| AfaI | GTAC | 1 cut(s) | 158 |
| AflIII | ACRYGT | 1 cut(s) | 72 |
| AgsI | TTSAA | 2 cut(s) | 241, 262 |
| AluBI | AGCT | 6 cut(s) | 137, 237, 248, 386, 404, 433 |
| AluI | AGCT | 6 cut(s) | 137, 237, 248, 386, 404, 433 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 29 |
| AoxI | GGCC | 2 cut(s) | 106, 209 |
| ApeKI | GCWGC | 1 cut(s) | 404 |
| ApoI | RAATTY | 1 cut(s) | 344 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 30 |
| AspS9I | GGNCC | 1 cut(s) | 209 |
| BalI | TGGCCA | 1 cut(s) | 108 |
| BbvI | GCAGC | 1 cut(s) | 391 |
| BccI | CCATC | 2 cut(s) | 82, 209 |
| BfaI | CTAG | 2 cut(s) | 245, 393 |
| BfmI | CTRYAG | 2 cut(s) | 315, 405 |
| BisI | GCNGC | 1 cut(s) | 405 |
| BlsI | GCNGC | 1 cut(s) | 406 |
| BmgT120I | GGNCC | 1 cut(s) | 209 |
| BmsI | GCATC | 1 cut(s) | 421 |
| BpmI | CTGGAG | 1 cut(s) | 402 |
| BpuEI | CTTGAG | 1 cut(s) | 413 |
| Bse1I | ACTGG | 1 cut(s) | 109 |
| Bse3DI | GCAATG | 2 cut(s) | 224, 429 |
| BseGI | GGATG | 2 cut(s) | 19, 259 |
| BseMI | GCAATG | 2 cut(s) | 224, 429 |
| BseNI | ACTGG | 1 cut(s) | 109 |
| BseXI | GCAGC | 1 cut(s) | 391 |
| BseYI | CCCAGC | 1 cut(s) | 206 |
| BshFI | GGCC | 2 cut(s) | 108, 211 |
| BslFI | GGGAC | 1 cut(s) | 305 |
| BsmFI | GGGAC | 1 cut(s) | 305 |
| BsnI | GGCC | 2 cut(s) | 108, 211 |
| Bsp143I | GATC | 1 cut(s) | 116 |
| BspACI | CCGC | 1 cut(s) | 51 |
| BspANI | GGCC | 2 cut(s) | 108, 211 |
| BspMAI | CTGCAG | 1 cut(s) | 409 |
| BsrDI | GCAATG | 2 cut(s) | 224, 429 |
| BsrI | ACTGG | 1 cut(s) | 109 |
| BssMI | GATC | 1 cut(s) | 116 |
| Bst4CI | ACNGT | 1 cut(s) | 277 |
| Bst6I | CTCTTC | 1 cut(s) | 294 |
| BstF5I | GGATG | 2 cut(s) | 19, 259 |
| BstKTI | GATC | 1 cut(s) | 119 |
| BstMBI | GATC | 1 cut(s) | 116 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 105, 317 |
| BstNSI | RCATGY | 1 cut(s) | 76 |
| BstSFI | CTRYAG | 2 cut(s) | 315, 405 |
| BstV1I | GCAGC | 1 cut(s) | 391 |
| BsuRI | GGCC | 2 cut(s) | 108, 211 |
| BtsCI | GGATG | 2 cut(s) | 19, 259 |
| CaiI | CAGNNNCTG | 1 cut(s) | 29 |
| Cfr13I | GGNCC | 1 cut(s) | 209 |
| Csp6I | GTAC | 1 cut(s) | 157 |
| CviAII | CATG | 2 cut(s) | 73, 416 |
| CviQI | GTAC | 1 cut(s) | 157 |
| DpnI | GATC | 1 cut(s) | 118 |
| DpnII | GATC | 1 cut(s) | 116 |
| EaeI | YGGCCR | 1 cut(s) | 106 |
| Eam1104I | CTCTTC | 1 cut(s) | 294 |
| EarI | CTCTTC | 1 cut(s) | 294 |
| FaeI | CATG | 2 cut(s) | 76, 419 |
| FaiI | YATR | 8 cut(s) | 74, 78, 83, 114, 121, 174, 317, 417 |
| FaqI | GGGAC | 1 cut(s) | 305 |
| FatI | CATG | 2 cut(s) | 72, 415 |
| Fnu4HI | GCNGC | 1 cut(s) | 405 |
| FokI | GGATG | 2 cut(s) | 26, 266 |
| Fsp4HI | GCNGC | 1 cut(s) | 405 |
| FspBI | CTAG | 2 cut(s) | 245, 393 |
| GluI | GCNGC | 1 cut(s) | 405 |
| GsaI | CCCAGC | 1 cut(s) | 210 |
| GsuI | CTGGAG | 1 cut(s) | 402 |
| HaeIII | GGCC | 2 cut(s) | 108, 211 |
| Hin1II | CATG | 2 cut(s) | 76, 419 |
| HinfI | GANTC | 2 cut(s) | 221, 364 |
| Hpy188I | TCNGA | 2 cut(s) | 25, 272 |
| Hpy188III | TCNNGA | 3 cut(s) | 182, 259, 381 |
| HpyAV | CCTTC | 1 cut(s) | 256 |
| HpyCH4III | ACNGT | 1 cut(s) | 277 |
| HpyCH4V | TGCA | 3 cut(s) | 311, 407, 422 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 105, 317 |
| Hsp92II | CATG | 2 cut(s) | 76, 419 |
| Kzo9I | GATC | 1 cut(s) | 116 |
| LmnI | GCTCC | 2 cut(s) | 91, 383 |
| Lsp1109I | GCAGC | 1 cut(s) | 391 |
| LweI | GCATC | 1 cut(s) | 421 |
| MaeI | CTAG | 2 cut(s) | 245, 393 |
| MalI | GATC | 1 cut(s) | 118 |
| MboI | GATC | 1 cut(s) | 116 |
| MboII | GAAGA | 1 cut(s) | 311 |
| MlsI | TGGCCA | 1 cut(s) | 108 |
| MluCI | AATT | 1 cut(s) | 344 |
| MluNI | TGGCCA | 1 cut(s) | 108 |
| MlyI | GAGTC | 1 cut(s) | 358 |
| MmeI | TCCRAC | 1 cut(s) | 310 |
| MnlI | CCTC | 1 cut(s) | 295 |
| Mox20I | TGGCCA | 1 cut(s) | 108 |
| MroXI | GAANNNNTTC | 1 cut(s) | 30 |
| MscI | TGGCCA | 1 cut(s) | 108 |
| MseI | TTAA | 2 cut(s) | 399, 444 |
| Msp20I | TGGCCA | 1 cut(s) | 108 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 105, 317 |
| NdeII | GATC | 1 cut(s) | 116 |
| NlaIII | CATG | 2 cut(s) | 76, 419 |
| NspI | RCATGY | 1 cut(s) | 76 |
| PciI | ACATGT | 1 cut(s) | 72 |
| PdmI | GAANNNNTTC | 1 cut(s) | 30 |
| PfeI | GAWTC | 1 cut(s) | 221 |
| PkrI | GCNGC | 1 cut(s) | 406 |
| PleI | GAGTC | 1 cut(s) | 358 |
| PpsI | GAGTC | 1 cut(s) | 358 |
| PscI | ACATGT | 1 cut(s) | 72 |
| PspFI | CCCAGC | 1 cut(s) | 206 |
| PspPI | GGNCC | 1 cut(s) | 209 |
| PstI | CTGCAG | 1 cut(s) | 409 |
| PstNI | CAGNNNCTG | 1 cut(s) | 29 |
| RsaI | GTAC | 1 cut(s) | 158 |
| RsaNI | GTAC | 1 cut(s) | 157 |
| SaqAI | TTAA | 2 cut(s) | 399, 444 |
| SatI | GCNGC | 1 cut(s) | 405 |
| Sau3AI | GATC | 1 cut(s) | 116 |
| Sau96I | GGNCC | 1 cut(s) | 209 |
| SchI | GAGTC | 1 cut(s) | 358 |
| SetI | ASST | 8 cut(s) | 31, 105, 139, 239, 250, 388, 406, 435 |
| SfaNI | GCATC | 1 cut(s) | 421 |
| SfcI | CTRYAG | 2 cut(s) | 315, 405 |
| SmlI | CTYRAG | 1 cut(s) | 428 |
| SmoI | CTYRAG | 1 cut(s) | 428 |
| Sse9I | AATT | 1 cut(s) | 344 |
| SsiI | CCGC | 1 cut(s) | 51 |
| SspMI | CTAG | 2 cut(s) | 245, 393 |
| TaaI | ACNGT | 1 cut(s) | 277 |
| TasI | AATT | 1 cut(s) | 344 |
| TfiI | GAWTC | 1 cut(s) | 221 |
| Tru1I | TTAA | 2 cut(s) | 399, 444 |
| Tru9I | TTAA | 2 cut(s) | 399, 444 |
| TseI | GCWGC | 1 cut(s) | 404 |
| TspDTI | ATGAA | 2 cut(s) | 30, 213 |
| XapI | RAATTY | 1 cut(s) | 344 |
| XceI | RCATGY | 1 cut(s) | 76 |
| XmnI | GAANNNNTTC | 1 cut(s) | 30 |
| XspI | CTAG | 2 cut(s) | 245, 393 |