RchiOBHm_Chr5g0073401

KIP1-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0005248
Physical Location & Seq
Reverse (-)
79426265 .. 79430481
4217 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34828

Sequence Viewer

Length: 1917 bp
ATGGCTTCTCCCTCGGTTCAGTCGAATAAGAGTATGAAAGGGTTGGAATCAAAAAAGTCTCATTCCTGGTGGTGGGACAGTCACATCAGTCCCAAAAACTCTAAGTGGCTTGCAGAGAATCTCGAGGAGATGGACAGGTGCATCAAGCGGATGCTGAAGCTGGTTGAAGAAGATGGGGATTCATTTGCAAAAAAGGCTGAAATGTATTATCAAAAGAGGCCTGAATTGATTTCTCATGTTGAAGATTTTTATCGCTTGTACCGGTCTCTAGCCGAACGTTATGATCATGTGACAGGAGAGCTAAGGAAGAATGTGACCTCAGATCTCCAATCCATGAGCTCATGCATTTCTGACGGTGGTTCAGAACTGCCATCTGCATGGTCCTCTCCTGATCTCCAATCTCAGAGGCTGAGTCGTCGTAAATCTGGCCCTCGTGCTGCTGGCTTTGATTTCTTCCTTGGCCCCAGTGGAAACAGCTCGGATAATTACCAGAAAGAAGGGGAAGAATCATCTTCGTTAACCGATTCTGAGCCAGAATCAGATGACGATGATTCTTCAGTCAACAATTACTCAGGGGTGTTGTCAAATGGAGGTGATCAAGGGCAGCAGAAGAAGATAATTCAATTGGAAATCGAGCTTCGTGAAGCGAGGGAGAAGCTTCGGCTGCAGGAAGAGAATGCAGATAGTCCATTGAGGGGGTCAAAAAATGAGAAGTCCGAGGAATTTTCTACAAAAATTGCAGAATATGCGCAAGAGCTGACGATTGCAAATGAAAAATTACAGGCCTCAGAGGAACAGATTTCCAGGTTGAACATTGAGCTCAAACGGTATAAATCATCAGAAAATGGCAATGCCTTTGAGGCCGGTCTTGAATCATCGGAACATAAAGAGGTCAAGAGGCATGAGAGTAAGCCAGACATGGAGGTAAATGAAGTGTTTGAGACACCTAGGTCGGGAGAAGTTCAAGATCCTGATAACAAGATAGAGGCATTGGTGGAAGAGCTGAGAATCACAAAAGATAGGCTTCAGCATTCACAGAAAGAGATTGCAAGTTTGAGACAAGAAGTTGAGAGTAATAAAGCCTCAAGATTGAATCATGAACAGGAGAGTAATAAAGCCTCTGAGAAAATTCATCTGTTGCAGGGTCAGCTTGAATCTGCTAAGAAGGACATTGCTACATGGAAAACAAAGCTTAACTCAGAGAAAAGAGAGGTTTCGAAGCTGCAGGAACGAATCGCAAGGTTAAAAACTAGTTTATCAGACAGGGATCATGAGGTCATGGATTTGAAAATAGCGGTATCTGATGCTGAGGAGAAGATATTCCCAGAGAAGGCACAGGTAAAGGCGGAAATATCTAGACTGTATTCGGAACGGACGCAACTGGAGGAGCAGATTAGAGACTGGGAGTCTCGAGGACGCTCTTTGGAGGATGAAATCAGAATGATTAAGGCTGGGAAAGCAGAAATGGAGGAGAGACTTACTAGCGAAATTGAGCAGTTAAAGGCGGAAATCCTTGAGATAGGCAATCACATCGGCAACTTACATAAGGCCCTTGATGCTATGAAAGCAGAAGGAGATGAGCTTAGCACAAAAGTTGTAACACTTAAAGCAGAAGTTAGTTATAGAGATGATAAGATAAATGAGATGGACATTCAGCTGCAGCAGTTGCACAAGGAGCAAGTGGAACTGGTTTCCAGGGCCGAAGGGGCATGGAAATTGGTGGAGGAGCTAACAGCAAGAACAAAAGAACTCGAAGAGGAGATTCAGAGGCAAAGAGTCATGATTTTAGAAGGAGCAGAAGAAAAGAGAGAAGCTATAAGGCAGTTGTGCTTCTCACTCGAACATTATAGGAACGGTTATCACAGGCTTCGGCAGGCTTGCATGGGGCACAAGAGAGTTCCGGTTTTGGCGTCTTGA

Protein Analysis

638

Amino Acids

73.28

Weight (kDa)

5.38

Isoelectric Point (pI)

64.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KIP1 PF07765 22 - 95 4.1e-37 KIP1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 949
Acc16I TGCGCA 1 cut(s) 750
AciI CCGC 4 cut(s) 148, 1295, 1346, 1505
AclI AACGTT 1 cut(s) 277
AclWI GGATC 2 cut(s) 962, 1275
AcsI RAATTY 2 cut(s) 722, 1128
AcuI CTGAAG 3 cut(s) 176, 540, 1010
AcyI GRCGYC 1 cut(s) 1910
AfaI GTAC 1 cut(s) 260
AfiI CCNNNNNNNGG 4 cut(s) 72, 695, 953, 1330
AgeI ACCGGT 1 cut(s) 261
AgsI TTSAA 9 cut(s) 167, 242, 623, 811, 872, 965, 1093, 1154, 1288
AhdI GACNNNNNGTC 1 cut(s) 1405
AhlI ACTAGT 1 cut(s) 1250
AjnI CCWGG 3 cut(s) 65, 803, 1694
Alw21I GWGCWC 2 cut(s) 341, 822
Alw26I GTCTC 7 cut(s) 63, 270, 935, 1051, 1392, 1413, 1468
AlwI GGATC 2 cut(s) 962, 1275
AlwNI CAGNNNCTG 1 cut(s) 409
Ama87I CYCGRG 2 cut(s) 122, 1410
AoxI GGCC 7 cut(s) 218, 427, 460, 783, 861, 1548, 1698
ApeKI GCWGC 6 cut(s) 437, 604, 664, 1222, 1657, 1660
ApoI RAATTY 2 cut(s) 722, 1128
AsiGI ACCGGT 1 cut(s) 261
Asp700I GAANNNNTTC 1 cut(s) 1319
AspA2I CCTAGG 1 cut(s) 947
AspLEI GCGC 1 cut(s) 751
AspS9I GGNCC 5 cut(s) 381, 428, 461, 1549, 1698
AsuHPI GGTGA 1 cut(s) 605
AsuII TTCGAA 1 cut(s) 1217
AvaI CYCGRG 2 cut(s) 122, 1410
AvaII GGWCC 1 cut(s) 381
AvrII CCTAGG 1 cut(s) 947
BaeGI GKGCMC 1 cut(s) 1890
BanII GRGCYC 2 cut(s) 341, 822
BauI CACGAG 1 cut(s) 432
Bbv12I GWGCWC 2 cut(s) 341, 822
BbvCI CCTCAGC 1 cut(s) 1308
BbvI GCAGC 6 cut(s) 424, 616, 651, 1209, 1644, 1672
BccI CCATC 4 cut(s) 124, 167, 379, 1639
BcgI CGANNNNNNTGC 2 cut(s) 1513, 1547
BciT130I CCWGG 3 cut(s) 67, 805, 1696
BclI TGATCA 2 cut(s) 283, 595
BcoDI GTCTC 7 cut(s) 63, 270, 935, 1051, 1392, 1413, 1468
BcuI ACTAGT 1 cut(s) 1250
BfaI CTAG 5 cut(s) 269, 948, 1251, 1356, 1482
BfmI CTRYAG 3 cut(s) 665, 1223, 1658
BglI GCCNNNNNGGC 2 cut(s) 860, 1706
BglII AGATCT 1 cut(s) 322
BisI GCNGC 6 cut(s) 438, 605, 665, 1223, 1658, 1661
BlnI CCTAGG 1 cut(s) 947
BlpI GCTNAGC 1 cut(s) 1583
BlsI GCNGC 6 cut(s) 439, 606, 666, 1224, 1659, 1662
Bme1390I CCNGG 3 cut(s) 67, 805, 1696
Bme18I GGWCC 1 cut(s) 381
BmeRI GACNNNNNGTC 1 cut(s) 1405
BmeT110I CYCGRG 2 cut(s) 122, 1410
BmgT120I GGNCC 5 cut(s) 381, 428, 461, 1549, 1698
BmiI GGNNCC 1 cut(s) 463
BmrFI CCNGG 3 cut(s) 67, 805, 1696
BmrI ACTGGG 2 cut(s) 459, 1411
BmsI GCATC 4 cut(s) 141, 150, 1294, 1546
BmuI ACTGGG 2 cut(s) 459, 1411
BpmI CTGGAG 1 cut(s) 1403
Bpu10I CCTNAGC 2 cut(s) 302, 1308
Bpu1102I GCTNAGC 1 cut(s) 1583
Bpu14I TTCGAA 1 cut(s) 1217
BpuEI CTTGAG 2 cut(s) 1069, 1535
BsaBI GATNNNNATC 1 cut(s) 249
BsaHI GRCGYC 1 cut(s) 1910
BsaI GGTCTC 1 cut(s) 270
BsaJI CCNNGG 5 cut(s) 12, 457, 717, 947, 1695
BsaWI WCCGGW 2 cut(s) 261, 1900
Bsc4I CCNNNNNNNGG 4 cut(s) 72, 695, 953, 1330
Bse118I RCCGGY 2 cut(s) 261, 863
Bse1I ACTGG 4 cut(s) 465, 1386, 1406, 1692
Bse3DI GCAATG 2 cut(s) 856, 1170
Bse8I GATNNNNATC 1 cut(s) 249
BseBI CCWGG 3 cut(s) 67, 805, 1696
BseDI CCNNGG 5 cut(s) 12, 457, 717, 947, 1695
BseGI GGATG 2 cut(s) 156, 1435
BseJI GATNNNNATC 1 cut(s) 249
BseLI CCNNNNNNNGG 4 cut(s) 72, 695, 953, 1330
BseMI GCAATG 2 cut(s) 856, 1170
BseNI ACTGG 4 cut(s) 465, 1386, 1406, 1692
BseRI GAGGAG 6 cut(s) 140, 1325, 1400, 1484, 1739, 1772
BseSI GKGCMC 1 cut(s) 1890
BseXI GCAGC 6 cut(s) 424, 616, 651, 1209, 1644, 1672
BseYI CCCAGC 1 cut(s) 1451
BshFI GGCC 7 cut(s) 220, 429, 462, 785, 863, 1550, 1700
BshTI ACCGGT 1 cut(s) 261
BsiHKAI GWGCWC 2 cut(s) 341, 822
BsiHKCI CYCGRG 2 cut(s) 122, 1410
BsiSI CCGG 3 cut(s) 262, 864, 1901
BslFI GGGAC 2 cut(s) 75, 89
BslI CCNNNNNNNGG 4 cut(s) 72, 695, 953, 1330
BsmAI GTCTC 7 cut(s) 63, 270, 935, 1051, 1392, 1413, 1468
BsmFI GGGAC 2 cut(s) 75, 89
BsmI GAATGC 2 cut(s) 682, 1030
BsnI GGCC 7 cut(s) 220, 429, 462, 785, 863, 1550, 1700
Bso31I GGTCTC 1 cut(s) 270
BsoBI CYCGRG 2 cut(s) 122, 1410
Bsp119I TTCGAA 1 cut(s) 1217
Bsp1286I GDGCHC 3 cut(s) 341, 822, 1890
Bsp143I GATC 6 cut(s) 283, 322, 391, 595, 967, 1267
Bsp1720I GCTNAGC 1 cut(s) 1583
BspACI CCGC 4 cut(s) 148, 1295, 1346, 1505
BspANI GGCC 7 cut(s) 220, 429, 462, 785, 863, 1550, 1700
BspHI TCATGA 3 cut(s) 1096, 1270, 1779
BspLI GGNNCC 1 cut(s) 463
BspMAI CTGCAG 3 cut(s) 669, 1227, 1662
BspPI GGATC 2 cut(s) 962, 1275
BspQI GCTCTTC 1 cut(s) 993
BspT104I TTCGAA 1 cut(s) 1217
BspTNI GGTCTC 1 cut(s) 270
BsrDI GCAATG 2 cut(s) 856, 1170
BsrFI RCCGGY 2 cut(s) 261, 863
BsrI ACTGG 4 cut(s) 465, 1386, 1406, 1692
BssAI RCCGGY 2 cut(s) 261, 863
BssECI CCNNGG 5 cut(s) 12, 457, 717, 947, 1695
BssMI GATC 6 cut(s) 283, 322, 391, 595, 967, 1267
BssNI GRCGYC 1 cut(s) 1910
BssSI CACGAG 1 cut(s) 432
BssT1I CCWWGG 2 cut(s) 457, 947
Bst2BI CACGAG 1 cut(s) 432
Bst2UI CCWGG 3 cut(s) 67, 805, 1696
Bst4CI ACNGT 5 cut(s) 80, 356, 828, 1362, 1856
Bst6I CTCTTC 3 cut(s) 666, 993, 1749
BstACI GRCGYC 1 cut(s) 1910
BstAPI GCANNNNNTGC 2 cut(s) 746, 1666
BstBI TTCGAA 1 cut(s) 1217
BstC8I GCNNGC 4 cut(s) 111, 442, 1875, 1879
BstF5I GGATG 2 cut(s) 156, 1435
BstHHI GCGC 1 cut(s) 751
BstKTI GATC 6 cut(s) 286, 325, 394, 598, 970, 1270
BstMAI GTCTC 7 cut(s) 63, 270, 935, 1051, 1392, 1413, 1468
BstMBI GATC 6 cut(s) 283, 322, 391, 595, 967, 1267
BstNI CCWGG 3 cut(s) 67, 805, 1696
BstSCI CCNGG 3 cut(s) 65, 803, 1694
BstSFI CTRYAG 3 cut(s) 665, 1223, 1658
BstSLI GKGCMC 1 cut(s) 1890
BstV1I GCAGC 6 cut(s) 424, 616, 651, 1209, 1644, 1672
BstX2I RGATCY 2 cut(s) 322, 967
BstXI CCANNNNNNTGG 1 cut(s) 378
BstYI RGATCY 2 cut(s) 322, 967
BsuRI GGCC 7 cut(s) 220, 429, 462, 785, 863, 1550, 1700
BtsCI GGATG 2 cut(s) 156, 1435
BtsIMutI CAGTG 1 cut(s) 472
Cac8I GCNNGC 4 cut(s) 111, 442, 1875, 1879
CaiI CAGNNNCTG 1 cut(s) 409
CciI TCATGA 3 cut(s) 1096, 1270, 1779
CfoI GCGC 1 cut(s) 751
Cfr10I RCCGGY 2 cut(s) 261, 863
Cfr13I GGNCC 5 cut(s) 381, 428, 461, 1549, 1698
CseI GACGC 3 cut(s) 1384, 1425, 1899
Csp6I GTAC 1 cut(s) 259
CspAI ACCGGT 1 cut(s) 261
CviQI GTAC 1 cut(s) 259
DpnI GATC 6 cut(s) 285, 324, 393, 597, 969, 1269
DpnII GATC 6 cut(s) 283, 322, 391, 595, 967, 1267
DrdI GACNNNNNNGTC 1 cut(s) 949
DriI GACNNNNNGTC 1 cut(s) 1405
DseDI GACNNNNNNGTC 1 cut(s) 949
Eam1104I CTCTTC 3 cut(s) 666, 993, 1749
Eam1105I GACNNNNNGTC 1 cut(s) 1405
EarI CTCTTC 3 cut(s) 666, 993, 1749
EciI GGCGGA 2 cut(s) 1361, 1520
Ecl136II GAGCTC 2 cut(s) 339, 820
Eco130I CCWWGG 2 cut(s) 457, 947
Eco147I AGGCCT 2 cut(s) 220, 785
Eco24I GRGCYC 2 cut(s) 341, 822
Eco31I GGTCTC 1 cut(s) 270
Eco47I GGWCC 1 cut(s) 381
Eco53kI GAGCTC 2 cut(s) 339, 820
Eco57I CTGAAG 3 cut(s) 176, 540, 1010
Eco88I CYCGRG 2 cut(s) 122, 1410
EcoICRI GAGCTC 2 cut(s) 339, 820
EcoO109I RGGNCCY 1 cut(s) 1549
EcoRII CCWGG 3 cut(s) 65, 803, 1694
EcoT14I CCWWGG 2 cut(s) 457, 947
EcoT22I ATGCAT 1 cut(s) 347
EcoT38I GRGCYC 2 cut(s) 341, 822
ErhI CCWWGG 2 cut(s) 457, 947
FalI AAGNNNNNCTT 2 cut(s) 1008, 1040
FaqI GGGAC 2 cut(s) 75, 89
FbaI TGATCA 2 cut(s) 283, 595
Fnu4HI GCNGC 6 cut(s) 438, 605, 665, 1223, 1658, 1661
FokI GGATG 2 cut(s) 163, 1442
FriOI GRGCYC 2 cut(s) 341, 822
Fsp4HI GCNGC 6 cut(s) 438, 605, 665, 1223, 1658, 1661
FspBI CTAG 5 cut(s) 269, 948, 1251, 1356, 1482
FspI TGCGCA 1 cut(s) 750
GlaI GCGC 1 cut(s) 750
GluI GCNGC 6 cut(s) 438, 605, 665, 1223, 1658, 1661
GsaI CCCAGC 1 cut(s) 1455
GsuI CTGGAG 1 cut(s) 1403
HaeIII GGCC 7 cut(s) 220, 429, 462, 785, 863, 1550, 1700
HapII CCGG 3 cut(s) 262, 864, 1901
HgaI GACGC 3 cut(s) 1384, 1425, 1899
HhaI GCGC 1 cut(s) 751
Hin1I GRCGYC 1 cut(s) 1910
Hin6I GCGC 1 cut(s) 749
HinP1I GCGC 1 cut(s) 749
HincII GTYRAC 2 cut(s) 519, 562
HindII GTYRAC 2 cut(s) 519, 562
HindIII AAGCTT 2 cut(s) 656, 1190
HpaI GTTAAC 1 cut(s) 519
HpaII CCGG 3 cut(s) 262, 864, 1901
HphI GGTGA 1 cut(s) 605
Hpy166II GTNNAC 2 cut(s) 519, 562
Hpy8I GTNNAC 2 cut(s) 519, 562
Hpy99I CGWCG 1 cut(s) 420
HpyAV CCTTC 6 cut(s) 491, 1159, 1324, 1565, 1697, 1784
HpyCH4III ACNGT 5 cut(s) 80, 356, 828, 1362, 1856
HpyCH4IV ACGT 1 cut(s) 277
HpySE526I ACGT 1 cut(s) 277
Hsp92I GRCGYC 1 cut(s) 1910
HspAI GCGC 1 cut(s) 749
Ksp22I TGATCA 2 cut(s) 283, 595
KspAI GTTAAC 1 cut(s) 519
Kzo9I GATC 6 cut(s) 283, 322, 391, 595, 967, 1267
LguI GCTCTTC 1 cut(s) 993
LmnI GCTCC 4 cut(s) 1387, 1675, 1726, 1793
Lsp1109I GCAGC 6 cut(s) 424, 616, 651, 1209, 1644, 1672
LweI GCATC 4 cut(s) 141, 150, 1294, 1546
MaeI CTAG 5 cut(s) 269, 948, 1251, 1356, 1482
MaeII ACGT 1 cut(s) 277
MaeIII GTNAC 4 cut(s) 80, 289, 313, 1597
MalI GATC 6 cut(s) 285, 324, 393, 597, 969, 1269
MboI GATC 6 cut(s) 283, 322, 391, 595, 967, 1267
MfeI CAATTG 1 cut(s) 623
MflI RGATCY 2 cut(s) 322, 967
MhlI GDGCHC 3 cut(s) 341, 822, 1890
MlyI GAGTC 3 cut(s) 421, 1415, 1785
MmeI TCCRAC 1 cut(s) 24
Mph1103I ATGCAT 1 cut(s) 347
MroXI GAANNNNTTC 1 cut(s) 1319
MseI TTAA 6 cut(s) 518, 1194, 1244, 1446, 1499, 1605
MslI CAYNNNNRTG 1 cut(s) 376
MspA1I CMGCKG 1 cut(s) 1657
MspI CCGG 3 cut(s) 262, 864, 1901
MspR9I CCNGG 3 cut(s) 67, 805, 1696
MunI CAATTG 1 cut(s) 623
Mva1269I GAATGC 2 cut(s) 682, 1030
MvaI CCWGG 3 cut(s) 67, 805, 1696
NdeII GATC 6 cut(s) 283, 322, 391, 595, 967, 1267
NlaIV GGNNCC 1 cut(s) 463
NmuCI GTSAC 3 cut(s) 80, 289, 313
NsbI TGCGCA 1 cut(s) 750
NsiI ATGCAT 1 cut(s) 347
NspV TTCGAA 1 cut(s) 1217
PaeR7I CTCGAG 2 cut(s) 122, 1410
PagI TCATGA 3 cut(s) 1096, 1270, 1779
PceI AGGCCT 2 cut(s) 220, 785
PciSI GCTCTTC 1 cut(s) 993
PcsI WCGNNNNNNNCGW 1 cut(s) 20
PctI GAATGC 2 cut(s) 682, 1030
PdmI GAANNNNTTC 1 cut(s) 1319
PinAI ACCGGT 1 cut(s) 261
PkrI GCNGC 6 cut(s) 439, 606, 666, 1224, 1659, 1662
PleI GAGTC 3 cut(s) 420, 1414, 1784
PpsI GAGTC 3 cut(s) 420, 1414, 1784
Psp124BI GAGCTC 2 cut(s) 341, 822
Psp1406I AACGTT 1 cut(s) 277
Psp6I CCWGG 3 cut(s) 65, 803, 1694
PspFI CCCAGC 1 cut(s) 1451
PspGI CCWGG 3 cut(s) 65, 803, 1694
PspN4I GGNNCC 1 cut(s) 463
PspPI GGNCC 5 cut(s) 381, 428, 461, 1549, 1698
PstI CTGCAG 3 cut(s) 669, 1227, 1662
PstNI CAGNNNCTG 1 cut(s) 409
PsuI RGATCY 2 cut(s) 322, 967
PvuII CAGCTG 1 cut(s) 1657
RsaI GTAC 1 cut(s) 260
RsaNI GTAC 1 cut(s) 259
RseI CAYNNNNRTG 1 cut(s) 376
SacI GAGCTC 2 cut(s) 341, 822
SapI GCTCTTC 1 cut(s) 993
SaqAI TTAA 6 cut(s) 518, 1194, 1244, 1446, 1499, 1605
SatI GCNGC 6 cut(s) 438, 605, 665, 1223, 1658, 1661
Sau3AI GATC 6 cut(s) 283, 322, 391, 595, 967, 1267
Sau96I GGNCC 5 cut(s) 381, 428, 461, 1549, 1698
SchI GAGTC 3 cut(s) 421, 1415, 1785
ScrFI CCNGG 3 cut(s) 67, 805, 1696
SduI GDGCHC 3 cut(s) 341, 822, 1890
SfaNI GCATC 4 cut(s) 141, 150, 1294, 1546
SfcI CTRYAG 3 cut(s) 665, 1223, 1658
Sfr274I CTCGAG 2 cut(s) 122, 1410
SfuI TTCGAA 1 cut(s) 1217
SinI GGWCC 1 cut(s) 381
SlaI CTCGAG 2 cut(s) 122, 1410
SmiMI CAYNNNNRTG 1 cut(s) 376
SmlI CTYRAG 4 cut(s) 122, 1084, 1410, 1514
SmoI CTYRAG 4 cut(s) 122, 1084, 1410, 1514
SpeI ACTAGT 1 cut(s) 1250
SseBI AGGCCT 2 cut(s) 220, 785
SsiI CCGC 4 cut(s) 148, 1295, 1346, 1505
SspMI CTAG 5 cut(s) 269, 948, 1251, 1356, 1482
SstI GAGCTC 2 cut(s) 341, 822
StuI AGGCCT 2 cut(s) 220, 785
StyD4I CCNGG 3 cut(s) 65, 803, 1694
StyI CCWWGG 2 cut(s) 457, 947
TaaI ACNGT 5 cut(s) 80, 356, 828, 1362, 1856
TaiI ACGT 1 cut(s) 280
TaqI TCGA 7 cut(s) 23, 123, 633, 1217, 1411, 1752, 1839
Tru1I TTAA 6 cut(s) 518, 1194, 1244, 1446, 1499, 1605
Tru9I TTAA 6 cut(s) 518, 1194, 1244, 1446, 1499, 1605
TscAI CASTG 1 cut(s) 472
TseFI GTSAC 3 cut(s) 80, 289, 313
TseI GCWGC 6 cut(s) 437, 604, 664, 1222, 1657, 1660
Tsp45I GTSAC 3 cut(s) 80, 289, 313
TspDTI ATGAA 8 cut(s) 50, 171, 786, 945, 1113, 1121, 1446, 1577
TspGWI ACGGA 1 cut(s) 1387
TspRI CASTG 1 cut(s) 472
VpaK11BI GGWCC 1 cut(s) 381
XapI RAATTY 2 cut(s) 722, 1128
XbaI TCTAGA 1 cut(s) 1355
XhoI CTCGAG 2 cut(s) 122, 1410
XmaJI CCTAGG 1 cut(s) 947
XmnI GAANNNNTTC 1 cut(s) 1319
XspI CTAG 5 cut(s) 269, 948, 1251, 1356, 1482
Zsp2I ATGCAT 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.