Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009201

Physical Location & Seq

Genomic Coordinates Forward (+)

29253959 .. 29257359

Gene Structure 3401 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ24320

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGGACTTCCATAACCATTTCAACACCACCAACAGAGCGGAAGCGGAGCGGTGGCTGAGCACCGCCGTGAAGCTACTGACGACACGTGACCTGCACGGGACCAAGAGCTTCGCGATCCGTGCCCGAGAGTCCGACCCGAGGCTGGGCGCCACCGACCAACTAATCGCCGTGGCCGACACGCTCCTCGCCGGAGAGTCACGGATCAACAACCAGCCCGACTGGTACGCGATTCTTCAACTGGCCCACCGCACTCACAGCCTTGAGCTCGTGGCGACTCAGTACCGTCGCCTCGCCCTTCTCCTCAACCCTCAGGCCAATCGGTTTCCTTACGCCGATCAGGCCTTCCGTCTCGTCTCCGAGGCCTGGACCGTGCTCTCAAACCCCTCCAAGAAGGCCCTCTACGACCACGACTTGAATATCTACTCCCGGTTCGACTCGCCTCCGCCCTCCTCCGGGTCAACTCAGTTGTTTGAAAGGCAGTTCTTGCAAATGCATGCACCGCCGCCGCCGCCGCCGCTGCAACCACCGCAACAACCATTTCAACAGCGGCTGCAGCCACTTCAGCGGCCGCAGCAGCTGCAGGCTCAACCGTTTCCGCACCAATTACAACCGCAACCACTTGAGCAGAGATCACAACCGCCGCAACCGCCACCTCAGACACAAGAAAAGCGACAGCCGCCACCGCCACCGCCGCCGCCGCCGCCGCCGCAAAATCAACAATCACCACAGAAGCAGCAGCAGCAGCAGAATAAGCCAGTGAGAAAAAGCCCAAGGAAGAAGGACGGAAGAGTGGCCGGTGAGGAAGAAACGCCGAATCCTAACAATGTGGCTAACAATGTGACTGAGTTTGAGTCAGAGTCAGCTGCCCCTCTCCCATCTGAGTCGCTTAGTACAACTCAGGTGCAAGCGGAGTCTGATTCCGGGAATTTCTGGACGGCATGCCCCTACTGTTATCACCTCTTTGAGTACTCGAGAGTTTATGAGGAGTGTATGCTTCGGTGTCAAAACTGTAAGAGGGCTTTCCACGCGGCGGTGATATCGACACCGCCTGTGATGGACAATGGGGAAGCAAATTTCTGCTGCTGGGCCTATTTCCCAATGGGGTTATCAGGGAGTGTTAAAGATACAGGAGGGTCATCTAACTGGACTCCCTTTTCAACTATGTTTGCTTGCCCTTTACCGGGTACTAAGAAGAAAGTTGGGAGACCTAAGAACGCTGCTGTGGGGTCAAGGGTTTACTACGACGATGATGACGCCTTCCTTGACATTTCCGATCCCAGTGAGGAATCCGATGATGAGTGGCAGAAGGATAAGAGGAGGAAGAAGAGAGTAGGAAGACCAAAAGGAAAAGCTTCCACTTCTAGAACCCCTGCAAGAGCTTCGGAGAGATTAAGGAAGGGGACTCAAAATGTTGGTGGGCAGGGCATGGTGAGTAATGGTGGGACACTGGGTGCTGTGTCTGCATCCAATGGGGAATCCAGTAAGAAGACAAGTGCTAGTGCAAGAAAGCGAGGTGCTGCTGCGTTGGGGAAATTGGATTTGAATGTGGAGTTTAGTAATAATGAGGTAGAGGAGCATGCTGCTCAGACAATGAGTGATGGGAACGGGACAGCAAATGGGGAGGAGGATAATATCGAAGGGATTGAGTTCTTCGAAGGTCTTGATGAGTTCTTGAGCAGTCTGCCCATACTCAATGTTGTTGGCAATGACAAGGTAAAGGCTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ

Protein Analysis

575

Amino Acids

63.8

Weight (kDa)

7.61

Isoelectric Point (pI)

61.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	73 - 135	4.4e-12	DnaJ domain
Zn_ribbon_20	PF23551	310 - 343	7.1e-07	Zinc beta-ribbon domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009201)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09540 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360
malus_domestica	MD10G1054200.v1.1
prunus_persica	Prupe.8G069000_v2.0.a1
pyrus_communis	pycom05g03930 pycom10g04110
rosa_chinensis	RchiOBHm_Chr6g0271111
rosa_laevigata	RLG00000013746
rosa_multiflora	Rmu_sc0005953.1_g000011
rosa_roxburghii	Rroxscaffold_7G00197300
rosa_rugosa	Rorug06G0058400
rosa_samantha	Rh6AG178300 Rh6BG181900 Rh6CG177400 Rh6DG169500
rosa_wichuraiana	Rw6G015230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	99
AccB1I	GGYRCC	1 cut(s)	146
AccBSI	CCGCTC	2 cut(s)	38, 49
AccII	CGCG	3 cut(s)	113, 227, 1028
AclWI	GGATC	3 cut(s)	109, 209, 1268
AcoI	YGGCCR	3 cut(s)	171, 566, 792
AcsI	RAATTY	2 cut(s)	925, 1072
AcuI	CTGAAG	1 cut(s)	545
AcvI	CACGTG	1 cut(s)	86
AcyI	GRCGYC	2 cut(s)	147, 1254
AdeI	CACNNNGTG	1 cut(s)	1451
AfaI	GTAC	5 cut(s)	224, 281, 892, 968, 1186
AfiI	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1030, 1180, 1181
AflIII	ACRYGT	1 cut(s)	83
AgsI	TTSAA	7 cut(s)	22, 236, 415, 473, 542, 1158, 1543
AjnI	CCWGG	1 cut(s)	362
AleI	CACNNNNGTG	1 cut(s)	65
AluBI	AGCT	7 cut(s)	73, 108, 265, 577, 863, 1352, 1379
AluI	AGCT	7 cut(s)	73, 108, 265, 577, 863, 1352, 1379
Alw21I	GWGCWC	3 cut(s)	62, 267, 375
Alw26I	GTCTC	3 cut(s)	353, 358, 1198
AlwI	GGATC	3 cut(s)	109, 209, 1268
AlwNI	CAGNNNCTG	2 cut(s)	550, 577
Ama87I	CYCGRG	3 cut(s)	123, 136, 970
AoxI	GGCC	9 cut(s)	171, 240, 312, 339, 360, 393, 566, 792, 1086
ApoI	RAATTY	2 cut(s)	925, 1072
Asp700I	GAANNNNTTC	1 cut(s)	1351
AspLEI	GCGC	1 cut(s)	149
AspS9I	GGNCC	5 cut(s)	99, 241, 366, 394, 1086
AsuC2I	CCSGG	4 cut(s)	427, 454, 922, 1182
AsuHPI	GGTGA	5 cut(s)	714, 809, 947, 1045, 1441
AsuII	TTCGAA	1 cut(s)	1653
AvaI	CYCGRG	3 cut(s)	123, 136, 970
AvaII	GGWCC	2 cut(s)	99, 366
AxyI	CCTNAGG	1 cut(s)	309
BaeGI	GKGCMC	1 cut(s)	124
BanI	GGYRCC	1 cut(s)	146
BanII	GRGCYC	1 cut(s)	267
BarI	GAAGNNNNNNTAC	2 cut(s)	383, 415
BauI	CACGAG	1 cut(s)	266
BbrPI	CACGTG	1 cut(s)	86
BbsI	GAAGAC	2 cut(s)	1342, 1493
Bbv12I	GWGCWC	3 cut(s)	62, 267, 375
BccI	CCATC	3 cut(s)	883, 1048, 1592
BceAI	ACGGC	3 cut(s)	50, 152, 951
BcgI	CGANNNNNNTGC	2 cut(s)	1362, 1396
BciT130I	CCWGG	1 cut(s)	364
BcnI	CCSGG	4 cut(s)	427, 454, 922, 1182
BcoDI	GTCTC	3 cut(s)	353, 358, 1198
BfaI	CTAG	2 cut(s)	1362, 1497
BfmI	CTRYAG	2 cut(s)	551, 578
BfoI	RGCGCY	1 cut(s)	150
BfuAI	ACCTGC	1 cut(s)	99
BglI	GCCNNNNNGGC	1 cut(s)	338
BlpI	GCTNAGC	1 cut(s)	56
BmcAI	AGTACT	1 cut(s)	968
Bme1390I	CCNGG	5 cut(s)	364, 427, 454, 922, 1182
Bme18I	GGWCC	2 cut(s)	99, 366
BmeT110I	CYCGRG	3 cut(s)	123, 136, 970
BmgT120I	GGNCC	5 cut(s)	99, 241, 366, 394, 1086
BmiI	GGNNCC	2 cut(s)	100, 148
BmrFI	CCNGG	5 cut(s)	364, 427, 454, 922, 1182
BmrI	ACTGGG	2 cut(s)	1272, 1457
BmsI	GCATC	1 cut(s)	1472
BmuI	ACTGGG	2 cut(s)	1272, 1457
BpiI	GAAGAC	2 cut(s)	1342, 1493
Bpu1102I	GCTNAGC	1 cut(s)	56
Bpu14I	TTCGAA	1 cut(s)	1653
BpuEI	CTTGAG	3 cut(s)	281, 641, 1693
BpuMI	CCSGG	4 cut(s)	427, 454, 922, 1182
BsaAI	YACGTR	1 cut(s)	86
BsaHI	GRCGYC	2 cut(s)	147, 1254
BsaI	GGTCTC	1 cut(s)	1198
BsaJI	CCNNGG	4 cut(s)	137, 168, 357, 770
Bsc4I	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1030, 1180, 1181
Bse118I	RCCGGY	1 cut(s)	794
Bse1I	ACTGG	7 cut(s)	224, 243, 755, 1148, 1278, 1452, 1479
Bse21I	CCTNAGG	1 cut(s)	309
Bse3DI	GCAATG	1 cut(s)	1711
BseBI	CCWGG	1 cut(s)	364
BseDI	CCNNGG	4 cut(s)	137, 168, 357, 770
BseGI	GGATG	1 cut(s)	1463
BseLI	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1030, 1180, 1181
BseMI	GCAATG	1 cut(s)	1711
BseMII	CTCAG	9 cut(s)	47, 290, 323, 476, 668, 834, 870, 911, 1598
BseNI	ACTGG	7 cut(s)	224, 243, 755, 1148, 1278, 1452, 1479
BseRI	GAGGAG	7 cut(s)	173, 290, 439, 998, 1330, 1586, 1637
BseSI	GKGCMC	1 cut(s)	124
BseX3I	CGGCCG	1 cut(s)	566
BseYI	CCCAGC	2 cut(s)	142, 1083
BsgI	GTGCAG	1 cut(s)	77
Bsh1236I	CGCG	3 cut(s)	113, 227, 1028
Bsh1285I	CGRYCG	1 cut(s)	569
BshFI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 568, 794, 1088
BshNI	GGYRCC	1 cut(s)	146
BsiEI	CGRYCG	1 cut(s)	569
BsiHKAI	GWGCWC	3 cut(s)	62, 267, 375
BsiHKCI	CYCGRG	3 cut(s)	123, 136, 970
BsiSI	CCGG	6 cut(s)	189, 427, 453, 795, 921, 1181
BslFI	GGGAC	4 cut(s)	112, 1414, 1456, 1621
BslI	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1030, 1180, 1181
BsmAI	GTCTC	3 cut(s)	353, 358, 1198
BsmBI	CGTCTC	2 cut(s)	353, 358
BsmFI	GGGAC	4 cut(s)	112, 1414, 1456, 1621
BsnI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 568, 794, 1088
Bso31I	GGTCTC	1 cut(s)	1198
BsoBI	CYCGRG	3 cut(s)	123, 136, 970
Bsp119I	TTCGAA	1 cut(s)	1653
Bsp1286I	GDGCHC	4 cut(s)	62, 124, 267, 375
Bsp143I	GATC	5 cut(s)	114, 201, 334, 629, 1273
Bsp1720I	GCTNAGC	1 cut(s)	56
Bsp68I	TCGCGA	1 cut(s)	113
BspANI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 568, 794, 1088
BspCNI	CTCAG	9 cut(s)	48, 289, 322, 475, 667, 835, 871, 910, 1597
BspFNI	CGCG	3 cut(s)	113, 227, 1028
BspLI	GGNNCC	2 cut(s)	100, 148
BspMAI	CTGCAG	2 cut(s)	555, 582
BspMI	ACCTGC	1 cut(s)	99
BspPI	GGATC	3 cut(s)	109, 209, 1268
BspT104I	TTCGAA	1 cut(s)	1653
BspT107I	GGYRCC	1 cut(s)	146
BspTNI	GGTCTC	1 cut(s)	1198
BsrBI	CCGCTC	2 cut(s)	38, 49
BsrDI	GCAATG	1 cut(s)	1711
BsrFI	RCCGGY	1 cut(s)	794
BsrI	ACTGG	7 cut(s)	224, 243, 755, 1148, 1278, 1452, 1479
BssAI	RCCGGY	1 cut(s)	794
BssECI	CCNNGG	4 cut(s)	137, 168, 357, 770
BssMI	GATC	5 cut(s)	114, 201, 334, 629, 1273
BssNI	GRCGYC	2 cut(s)	147, 1254
BssSI	CACGAG	1 cut(s)	266
BssT1I	CCWWGG	1 cut(s)	770
Bst2BI	CACGAG	1 cut(s)	266
Bst2UI	CCWGG	1 cut(s)	364
Bst4CI	ACNGT	5 cut(s)	284, 370, 591, 950, 1010
Bst6I	CTCTTC	2 cut(s)	781, 1319
BstACI	GRCGYC	2 cut(s)	147, 1254
BstAPI	GCANNNNNTGC	2 cut(s)	484, 577
BstBAI	YACGTR	1 cut(s)	86
BstBI	TTCGAA	1 cut(s)	1653
BstC8I	GCNNGC	6 cut(s)	495, 582, 906, 940, 1171, 1578
BstDSI	CCRYGG	1 cut(s)	168
BstF5I	GGATG	1 cut(s)	1463
BstFNI	CGCG	3 cut(s)	113, 227, 1028
BstH2I	RGCGCY	1 cut(s)	150
BstHHI	GCGC	1 cut(s)	149
BstKTI	GATC	5 cut(s)	117, 204, 337, 632, 1276
BstMAI	GTCTC	3 cut(s)	353, 358, 1198
BstMBI	GATC	5 cut(s)	114, 201, 334, 629, 1273
BstMCI	CGRYCG	1 cut(s)	569
BstNI	CCWGG	1 cut(s)	364
BstNSI	RCATGY	3 cut(s)	497, 942, 1580
BstSCI	CCNGG	5 cut(s)	362, 425, 452, 920, 1180
BstSFI	CTRYAG	2 cut(s)	551, 578
BstSLI	GKGCMC	1 cut(s)	124
BstUI	CGCG	3 cut(s)	113, 227, 1028
BstV2I	GAAGAC	2 cut(s)	1342, 1493
BstZI	CGGCCG	1 cut(s)	566
Bsu36I	CCTNAGG	1 cut(s)	309
BsuRI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 568, 794, 1088
BtgI	CCRYGG	1 cut(s)	168
BtsCI	GGATG	1 cut(s)	1463
BtsIMutI	CAGTG	3 cut(s)	762, 1285, 1445
BtuMI	TCGCGA	1 cut(s)	113
BveI	ACCTGC	1 cut(s)	99
Cac8I	GCNNGC	6 cut(s)	495, 582, 906, 940, 1171, 1578
CaiI	CAGNNNCTG	2 cut(s)	550, 577
CciNI	GCGGCCGC	1 cut(s)	566
CfoI	GCGC	1 cut(s)	149
Cfr10I	RCCGGY	1 cut(s)	794
Cfr13I	GGNCC	5 cut(s)	99, 241, 366, 394, 1086
CseI	GACGC	1 cut(s)	1262
Csp6I	GTAC	5 cut(s)	223, 280, 891, 967, 1185
CviAII	CATG	4 cut(s)	494, 939, 1426, 1577
CviQI	GTAC	5 cut(s)	223, 280, 891, 967, 1185
DinI	GGCGCC	1 cut(s)	148
DpnI	GATC	5 cut(s)	116, 203, 336, 631, 1275
DpnII	GATC	5 cut(s)	114, 201, 334, 629, 1273
DraIII	CACNNNGTG	1 cut(s)	1451
EaeI	YGGCCR	3 cut(s)	171, 566, 792
EagI	CGGCCG	1 cut(s)	566
Eam1104I	CTCTTC	2 cut(s)	781, 1319
EarI	CTCTTC	2 cut(s)	781, 1319
EciI	GGCGGA	1 cut(s)	432
Ecl136II	GAGCTC	1 cut(s)	265
EclXI	CGGCCG	1 cut(s)	566
Eco130I	CCWWGG	1 cut(s)	770
Eco147I	AGGCCT	2 cut(s)	341, 362
Eco24I	GRGCYC	1 cut(s)	267
Eco31I	GGTCTC	1 cut(s)	1198
Eco32I	GATATC	1 cut(s)	1038
Eco47I	GGWCC	2 cut(s)	99, 366
Eco52I	CGGCCG	1 cut(s)	566
Eco53kI	GAGCTC	1 cut(s)	265
Eco57I	CTGAAG	1 cut(s)	545
Eco72I	CACGTG	1 cut(s)	86
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	3 cut(s)	123, 136, 970
EcoICRI	GAGCTC	1 cut(s)	265
EcoO109I	RGGNCCY	1 cut(s)	394
EcoRII	CCWGG	1 cut(s)	362
EcoRV	GATATC	1 cut(s)	1038
EcoT14I	CCWWGG	1 cut(s)	770
EcoT22I	ATGCAT	1 cut(s)	495
EcoT38I	GRGCYC	1 cut(s)	267
EgeI	GGCGCC	1 cut(s)	148
EheI	GGCGCC	1 cut(s)	148
ErhI	CCWWGG	1 cut(s)	770
Esp3I	CGTCTC	2 cut(s)	353, 358
FaeI	CATG	4 cut(s)	497, 942, 1429, 1580
FaiI	YATR	9 cut(s)	12, 495, 940, 981, 992, 1163, 1427, 1578, 1688
FaqI	GGGAC	4 cut(s)	112, 1414, 1456, 1621
FatI	CATG	4 cut(s)	493, 938, 1425, 1576
FokI	GGATG	1 cut(s)	1450
FriOI	GRGCYC	1 cut(s)	267
FspBI	CTAG	2 cut(s)	1362, 1497
GlaI	GCGC	1 cut(s)	148
GsaI	CCCAGC	2 cut(s)	146, 1087
HaeII	RGCGCY	1 cut(s)	150
HaeIII	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 568, 794, 1088
HapII	CCGG	6 cut(s)	189, 427, 453, 795, 921, 1181
HgaI	GACGC	1 cut(s)	1262
HhaI	GCGC	1 cut(s)	149
Hin1I	GRCGYC	2 cut(s)	147, 1254
Hin1II	CATG	4 cut(s)	497, 942, 1429, 1580
Hin6I	GCGC	1 cut(s)	147
HinP1I	GCGC	1 cut(s)	147
HincII	GTYRAC	1 cut(s)	459
HindII	GTYRAC	1 cut(s)	459
HindIII	AAGCTT	1 cut(s)	1350
HpaII	CCGG	6 cut(s)	189, 427, 453, 795, 921, 1181
HphI	GGTGA	5 cut(s)	714, 809, 947, 1045, 1441
Hpy166II	GTNNAC	2 cut(s)	459, 1237
Hpy188III	TCNNGA	6 cut(s)	112, 931, 972, 1362, 1661, 1672
Hpy8I	GTNNAC	2 cut(s)	459, 1237
Hpy99I	CGWCG	2 cut(s)	288, 1247
HpyAV	CCTTC	9 cut(s)	305, 352, 385, 772, 1267, 1300, 1390, 1631, 1649
HpyCH4III	ACNGT	5 cut(s)	284, 370, 591, 950, 1010
HpyCH4IV	ACGT	1 cut(s)	85
HpySE526I	ACGT	1 cut(s)	85
Hsp92I	GRCGYC	2 cut(s)	147, 1254
Hsp92II	CATG	4 cut(s)	497, 942, 1429, 1580
HspAI	GCGC	1 cut(s)	147
KasI	GGCGCC	1 cut(s)	146
Kzo9I	GATC	5 cut(s)	114, 201, 334, 629, 1273
LmnI	GCTCC	3 cut(s)	46, 186, 1573
LweI	GCATC	1 cut(s)	1472
MaeI	CTAG	2 cut(s)	1362, 1497
MaeII	ACGT	1 cut(s)	85
MaeIII	GTNAC	3 cut(s)	86, 195, 838
MalI	GATC	5 cut(s)	116, 203, 336, 631, 1275
MbiI	CCGCTC	2 cut(s)	38, 49
MboI	GATC	5 cut(s)	114, 201, 334, 629, 1273
MhlI	GDGCHC	4 cut(s)	62, 124, 267, 375
MluCI	AATT	5 cut(s)	602, 925, 1072, 1532, 1723
Mly113I	GGCGCC	1 cut(s)	147
MmeI	TCCRAC	1 cut(s)	156
Mph1103I	ATGCAT	1 cut(s)	495
MroXI	GAANNNNTTC	1 cut(s)	1351
MseI	TTAA	2 cut(s)	1119, 1391
MslI	CAYNNNNRTG	1 cut(s)	65
MspA1I	CMGCKG	5 cut(s)	517, 547, 565, 577, 863
MspI	CCGG	6 cut(s)	189, 427, 453, 795, 921, 1181
MspR9I	CCNGG	5 cut(s)	364, 427, 454, 922, 1182
MvaI	CCWGG	1 cut(s)	364
MvnI	CGCG	3 cut(s)	113, 227, 1028
NarI	GGCGCC	1 cut(s)	147
NciI	CCSGG	4 cut(s)	427, 454, 922, 1182
NdeII	GATC	5 cut(s)	114, 201, 334, 629, 1273
NlaIII	CATG	4 cut(s)	497, 942, 1429, 1580
NlaIV	GGNNCC	2 cut(s)	100, 148
NmuCI	GTSAC	3 cut(s)	86, 195, 838
NotI	GCGGCCGC	1 cut(s)	566
NruI	TCGCGA	1 cut(s)	113
NsiI	ATGCAT	1 cut(s)	495
NspI	RCATGY	3 cut(s)	497, 942, 1580
NspV	TTCGAA	1 cut(s)	1653
OliI	CACNNNNGTG	1 cut(s)	65
PaeI	GCATGC	3 cut(s)	497, 942, 1580
PaeR7I	CTCGAG	1 cut(s)	970
PceI	AGGCCT	2 cut(s)	341, 362
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PdmI	GAANNNNTTC	1 cut(s)	1351
PfeI	GAWTC	5 cut(s)	229, 814, 917, 1286, 1475
PfoI	TCCNGGA	1 cut(s)	920
PluTI	GGCGCC	1 cut(s)	150
PmaCI	CACGTG	1 cut(s)	86
PmlI	CACGTG	1 cut(s)	86
Ppu21I	YACGTR	1 cut(s)	86
Psp124BI	GAGCTC	1 cut(s)	267
Psp6I	CCWGG	1 cut(s)	362
PspCI	CACGTG	1 cut(s)	86
PspFI	CCCAGC	2 cut(s)	142, 1083
PspGI	CCWGG	1 cut(s)	362
PspN4I	GGNNCC	2 cut(s)	100, 148
PspPI	GGNCC	5 cut(s)	99, 241, 366, 394, 1086
PstI	CTGCAG	2 cut(s)	555, 582
PstNI	CAGNNNCTG	2 cut(s)	550, 577
PvuII	CAGCTG	2 cut(s)	577, 863
RruI	TCGCGA	1 cut(s)	113
RsaI	GTAC	5 cut(s)	224, 281, 892, 968, 1186
RsaNI	GTAC	5 cut(s)	223, 280, 891, 967, 1185
RseI	CAYNNNNRTG	1 cut(s)	65
SacI	GAGCTC	1 cut(s)	267
SaqAI	TTAA	2 cut(s)	1119, 1391
Sau3AI	GATC	5 cut(s)	114, 201, 334, 629, 1273
Sau96I	GGNCC	5 cut(s)	99, 241, 366, 394, 1086
ScaI	AGTACT	1 cut(s)	968
ScrFI	CCNGG	5 cut(s)	364, 427, 454, 922, 1182
SduI	GDGCHC	4 cut(s)	62, 124, 267, 375
SfaNI	GCATC	1 cut(s)	1472
SfcI	CTRYAG	2 cut(s)	551, 578
SfoI	GGCGCC	1 cut(s)	148
Sfr274I	CTCGAG	1 cut(s)	970
SfuI	TTCGAA	1 cut(s)	1653
SinI	GGWCC	2 cut(s)	99, 366
SlaI	CTCGAG	1 cut(s)	970
SmiMI	CAYNNNNRTG	1 cut(s)	65
SmlI	CTYRAG	4 cut(s)	260, 620, 970, 1672
SmoI	CTYRAG	4 cut(s)	260, 620, 970, 1672
SphI	GCATGC	3 cut(s)	497, 942, 1580
Sse9I	AATT	5 cut(s)	602, 925, 1072, 1532, 1723
SseBI	AGGCCT	2 cut(s)	341, 362
SspDI	GGCGCC	1 cut(s)	146
SspMI	CTAG	2 cut(s)	1362, 1497
SstI	GAGCTC	1 cut(s)	267
StuI	AGGCCT	2 cut(s)	341, 362
StyD4I	CCNGG	5 cut(s)	362, 425, 452, 920, 1180
StyI	CCWWGG	1 cut(s)	770
TaaI	ACNGT	5 cut(s)	284, 370, 591, 950, 1010
TaiI	ACGT	1 cut(s)	88
TaqI	TCGA	5 cut(s)	432, 971, 1040, 1635, 1653
TasI	AATT	5 cut(s)	602, 925, 1072, 1532, 1723
TatI	WGTACW	2 cut(s)	890, 966
TfiI	GAWTC	5 cut(s)	229, 814, 917, 1286, 1475
Tru1I	TTAA	2 cut(s)	1119, 1391
Tru9I	TTAA	2 cut(s)	1119, 1391
TscAI	CASTG	3 cut(s)	762, 1285, 1452
TseFI	GTSAC	3 cut(s)	86, 195, 838
Tsp45I	GTSAC	3 cut(s)	86, 195, 838
TspGWI	ACGGA	4 cut(s)	107, 214, 335, 798
TspRI	CASTG	3 cut(s)	762, 1285, 1452
VpaK11BI	GGWCC	2 cut(s)	99, 366
XapI	RAATTY	2 cut(s)	925, 1072
XbaI	TCTAGA	1 cut(s)	1361
XceI	RCATGY	3 cut(s)	497, 942, 1580
XhoI	CTCGAG	1 cut(s)	970
XmnI	GAANNNNTTC	1 cut(s)	1351
XspI	CTAG	2 cut(s)	1362, 1497
ZrmI	AGTACT	1 cut(s)	968
Zsp2I	ATGCAT	1 cut(s)	495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.