Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0009201

Physical Location & Seq

Genomic Coordinates Reverse (-)

41386977 .. 41389070

Gene Structure 2094 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00197300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGACTTCCATAACCATTTCAACACCACCAACAGAGCGGAAGCGGAGCGGTGGCTGAGCACCGCCGTGAAGCTACTGACGACACGTGACCTGCACGGGACCAAGAGCTTCGCGATCCGTGCCCGAGAGTCCGACCCGAGGCTGAGCGCCACCGACCAACTAATCGCCGTGGCCGACACGCTCCTCGCCGGAGAGTCACGGATCAACAACCAGCCCGACTGGTACGCGATTCTTCAACTGGCCCACCGCACTCACAGCCTTGAGCTCGTGGCGACTCAGTACCGTCGTCTCGCCCTTCTCCTCAACCCTCAGGCCAATCGGTTTCCTTACGCCGATCAGGCCTTCCGTCTTGTCTCCGAGGCCTGGACCGTGCTCTCAAACCCCTCCAAGAAGGCCCTCTACGACCACGACTTGAATATCTACTCCCGGTTCGACTCGCCTCCGCCCTCCTCCGGGTCAACTCAGTTGTTTGAAAGGCAGTTCTTGCAAATGCATGCACCGCCGCCGCCGCTGCAACCACCGCAACAACCATTTCAACAGCGGCTGCAGCCACTTCAGCGGCCGCAGCAGGTGCAGGCTCAACCGTTTCCGCACCAATTACAACCGCAACCACTTGAGCAGAGACCACAACCGCCGCCTCAGACACAAGAAAAGCGACAGCCACCACCACCACCACCGCCGCCGCCGCCGCCGCAAAATCAACAATCACCACAGAAGCAGCAGCAGCAGCAGAATAAGCCAGTGAGAAAAAGCCCAAGGAAGAAGGACGGAAGAGTGGCCGGTGAGGAAGAAACGCCGAATCCTAACAATGTGGCTAACAATGTGACTGAGTTTGAGTCAGAGTCAGCTGCCCCTCTCCCATCTGAGTCGCTTAGTACAACTCAGGTGCAAGCGGAGTCTGATTCCGGGAATTTCTGGACGGCATGCCCCTACTGTTATCACCTCTTTGAGTACTCGAGAGTTTATGAGGAGTGTATGCTTCGGTGTCAAAACTGTAAGAGGGCTTTCCATGCGGTGGTGATATCGACACCGCCTGTGATGGACAATGGGGAAGCAAATTTCTGCTGCTGGGCCTATTTCCCAATGGGGTTATCAGGGAGTGTTAAAGATACAGGAGGGTCATCTAACTGGACTCCCTTTTCAACTATGTTTGCTTGCCCTTTACCGGGTACTAAGAAGAAAGTTGGGAGACCTAAGAACGCTGCTGTGGGGTCAAGGGTTTACTACGACGATGATGACGCCTTTCTTGACATTTCCGATCCCAGTGAGGAATCCGATGATGAGTGGCAGAAGGATAAGAGGAGGAAGAAGAGAGCAGGAAGACCAAAAGGAAAAGCTTCCAATTCTAGAACCCCTGCAAGAGCTTCGGAGAGATTAAGGAAGGTGACTCAAAATGTTGGTGGGCAGGGCATGGTGAGTAATGGTGGGACACTGGGTGCTGTGTCTGCATCCAATGGGGAATCCAGTAAGAAGACAAGTGCTAGTGCAAGAAAGCGAGGTGCTGCTGCGTTGGGGAAATTGGATTTGAATGTGGAGTTTAGTAATAATGAGGTAGAGGAGCATGCTACTCAGACAATGAGTGATGGGAACGGGACAGCAAATGGGGAGGAGGATAATATTGAAGGGATTGAGTTCTTCGAAGGTCTTGATGAGTTCTTGAGCAGTCTGCCCATACTCAATGTTGTTGGCAATGACAAGGTAAAGGCTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ

Protein Analysis

570

Amino Acids

63.4

Weight (kDa)

7.61

Isoelectric Point (pI)

59.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	73 - 135	4.4e-12	DnaJ domain
Zn_ribbon_20	PF23551	305 - 339	2.3e-07	Zinc beta-ribbon domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009201)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09540 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360
malus_domestica	MD10G1054200.v1.1
prunus_persica	Prupe.8G069000_v2.0.a1
pyrus_communis	pycom05g03930 pycom10g04110
rosa_chinensis	RchiOBHm_Chr6g0271111
rosa_laevigata	RLG00000013746
rosa_multiflora	Rmu_sc0005953.1_g000011
rosa_roxburghii	Rroxscaffold_7G00197300
rosa_rugosa	Rorug06G0058400
rosa_samantha	Rh6AG178300 Rh6BG181900 Rh6CG177400 Rh6DG169500
rosa_wichuraiana	Rw6G015230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	559
Acc36I	ACCTGC	2 cut(s)	99, 559
AccB7I	CCANNNNNTGG	1 cut(s)	1015
AccBSI	CCGCTC	2 cut(s)	38, 49
AccII	CGCG	2 cut(s)	113, 227
AclWI	GGATC	3 cut(s)	109, 209, 1253
AcoI	YGGCCR	3 cut(s)	171, 560, 777
AcsI	RAATTY	2 cut(s)	910, 1057
AcuI	CTGAAG	1 cut(s)	539
AcvI	CACGTG	1 cut(s)	86
AcyI	GRCGYC	1 cut(s)	1239
AdeI	CACNNNGTG	1 cut(s)	1436
AfaI	GTAC	5 cut(s)	224, 281, 877, 953, 1171
AfiI	CCNNNNNNNGG	7 cut(s)	138, 363, 452, 453, 1015, 1165, 1166
AflIII	ACRYGT	1 cut(s)	83
AgsI	TTSAA	8 cut(s)	22, 236, 415, 473, 536, 1143, 1528, 1622
AjnI	CCWGG	1 cut(s)	362
AleI	CACNNNNGTG	1 cut(s)	65
AluBI	AGCT	6 cut(s)	73, 108, 265, 848, 1337, 1364
AluI	AGCT	6 cut(s)	73, 108, 265, 848, 1337, 1364
Alw21I	GWGCWC	3 cut(s)	62, 267, 375
Alw26I	GTCTC	4 cut(s)	293, 358, 616, 1183
AlwI	GGATC	3 cut(s)	109, 209, 1253
AlwNI	CAGNNNCTG	1 cut(s)	544
Ama87I	CYCGRG	3 cut(s)	123, 136, 955
AoxI	GGCC	9 cut(s)	171, 240, 312, 339, 360, 393, 560, 777, 1071
ApoI	RAATTY	2 cut(s)	910, 1057
Asp700I	GAANNNNTTC	1 cut(s)	1336
AspLEI	GCGC	1 cut(s)	149
AspS9I	GGNCC	5 cut(s)	99, 241, 366, 394, 1071
AsuC2I	CCSGG	4 cut(s)	427, 454, 907, 1167
AsuHPI	GGTGA	6 cut(s)	699, 794, 932, 1030, 1396, 1426
AsuII	TTCGAA	1 cut(s)	1638
AvaI	CYCGRG	3 cut(s)	123, 136, 955
AvaII	GGWCC	2 cut(s)	99, 366
AxyI	CCTNAGG	1 cut(s)	309
BaeGI	GKGCMC	1 cut(s)	124
BanII	GRGCYC	1 cut(s)	267
BarI	GAAGNNNNNNTAC	2 cut(s)	383, 415
BauI	CACGAG	1 cut(s)	266
BbrPI	CACGTG	1 cut(s)	86
BbsI	GAAGAC	2 cut(s)	1327, 1478
Bbv12I	GWGCWC	3 cut(s)	62, 267, 375
BccI	CCATC	3 cut(s)	868, 1033, 1577
BceAI	ACGGC	3 cut(s)	50, 152, 936
BcgI	CGANNNNNNTGC	2 cut(s)	1347, 1381
BciT130I	CCWGG	1 cut(s)	364
BcnI	CCSGG	4 cut(s)	427, 454, 907, 1167
BcoDI	GTCTC	4 cut(s)	293, 358, 616, 1183
BfaI	CTAG	2 cut(s)	1347, 1482
BfmI	CTRYAG	1 cut(s)	545
BfoI	RGCGCY	1 cut(s)	150
BfuAI	ACCTGC	2 cut(s)	99, 559
BglI	GCCNNNNNGGC	1 cut(s)	338
BlpI	GCTNAGC	2 cut(s)	56, 143
BmcAI	AGTACT	1 cut(s)	953
Bme1390I	CCNGG	5 cut(s)	364, 427, 454, 907, 1167
Bme18I	GGWCC	2 cut(s)	99, 366
BmeT110I	CYCGRG	3 cut(s)	123, 136, 955
BmgT120I	GGNCC	5 cut(s)	99, 241, 366, 394, 1071
BmiI	GGNNCC	1 cut(s)	100
BmrFI	CCNGG	5 cut(s)	364, 427, 454, 907, 1167
BmrI	ACTGGG	2 cut(s)	1257, 1442
BmsI	GCATC	1 cut(s)	1457
BmuI	ACTGGG	2 cut(s)	1257, 1442
BpiI	GAAGAC	2 cut(s)	1327, 1478
Bpu1102I	GCTNAGC	2 cut(s)	56, 143
Bpu14I	TTCGAA	1 cut(s)	1638
BpuEI	CTTGAG	3 cut(s)	281, 635, 1678
BpuMI	CCSGG	4 cut(s)	427, 454, 907, 1167
BsaAI	YACGTR	1 cut(s)	86
BsaHI	GRCGYC	1 cut(s)	1239
BsaI	GGTCTC	2 cut(s)	616, 1183
BsaJI	CCNNGG	4 cut(s)	137, 168, 357, 755
Bsc4I	CCNNNNNNNGG	7 cut(s)	138, 363, 452, 453, 1015, 1165, 1166
Bse118I	RCCGGY	1 cut(s)	779
Bse1I	ACTGG	7 cut(s)	224, 243, 740, 1133, 1263, 1437, 1464
Bse21I	CCTNAGG	1 cut(s)	309
Bse3DI	GCAATG	1 cut(s)	1696
BseBI	CCWGG	1 cut(s)	364
BseDI	CCNNGG	4 cut(s)	137, 168, 357, 755
BseGI	GGATG	1 cut(s)	1448
BseLI	CCNNNNNNNGG	7 cut(s)	138, 363, 452, 453, 1015, 1165, 1166
BseMI	GCAATG	1 cut(s)	1696
BseNI	ACTGG	7 cut(s)	224, 243, 740, 1133, 1263, 1437, 1464
BseRI	GAGGAG	7 cut(s)	173, 290, 439, 983, 1315, 1571, 1622
BseSI	GKGCMC	1 cut(s)	124
BseX3I	CGGCCG	1 cut(s)	560
BseYI	CCCAGC	1 cut(s)	1068
BsgI	GTGCAG	2 cut(s)	77, 593
Bsh1236I	CGCG	2 cut(s)	113, 227
Bsh1285I	CGRYCG	1 cut(s)	563
BshFI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 562, 779, 1073
BsiEI	CGRYCG	1 cut(s)	563
BsiHKAI	GWGCWC	3 cut(s)	62, 267, 375
BsiHKCI	CYCGRG	3 cut(s)	123, 136, 955
BsiSI	CCGG	6 cut(s)	189, 427, 453, 780, 906, 1166
BslFI	GGGAC	3 cut(s)	112, 1441, 1606
BslI	CCNNNNNNNGG	7 cut(s)	138, 363, 452, 453, 1015, 1165, 1166
BsmAI	GTCTC	4 cut(s)	293, 358, 616, 1183
BsmBI	CGTCTC	1 cut(s)	293
BsmFI	GGGAC	3 cut(s)	112, 1441, 1606
BsnI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 562, 779, 1073
Bso31I	GGTCTC	2 cut(s)	616, 1183
BsoBI	CYCGRG	3 cut(s)	123, 136, 955
Bsp119I	TTCGAA	1 cut(s)	1638
Bsp1286I	GDGCHC	4 cut(s)	62, 124, 267, 375
Bsp143I	GATC	4 cut(s)	114, 201, 334, 1258
Bsp1720I	GCTNAGC	2 cut(s)	56, 143
Bsp68I	TCGCGA	1 cut(s)	113
BspANI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 562, 779, 1073
BspFNI	CGCG	2 cut(s)	113, 227
BspLI	GGNNCC	1 cut(s)	100
BspMAI	CTGCAG	1 cut(s)	549
BspMI	ACCTGC	2 cut(s)	99, 559
BspPI	GGATC	3 cut(s)	109, 209, 1253
BspT104I	TTCGAA	1 cut(s)	1638
BspTNI	GGTCTC	2 cut(s)	616, 1183
BsrBI	CCGCTC	2 cut(s)	38, 49
BsrDI	GCAATG	1 cut(s)	1696
BsrFI	RCCGGY	1 cut(s)	779
BsrI	ACTGG	7 cut(s)	224, 243, 740, 1133, 1263, 1437, 1464
BssAI	RCCGGY	1 cut(s)	779
BssECI	CCNNGG	4 cut(s)	137, 168, 357, 755
BssMI	GATC	4 cut(s)	114, 201, 334, 1258
BssNI	GRCGYC	1 cut(s)	1239
BssSI	CACGAG	1 cut(s)	266
BssT1I	CCWWGG	1 cut(s)	755
Bst2BI	CACGAG	1 cut(s)	266
Bst2UI	CCWGG	1 cut(s)	364
Bst4CI	ACNGT	5 cut(s)	284, 370, 585, 935, 995
Bst6I	CTCTTC	2 cut(s)	766, 1304
BstACI	GRCGYC	1 cut(s)	1239
BstAPI	GCANNNNNTGC	2 cut(s)	484, 571
BstBAI	YACGTR	1 cut(s)	86
BstBI	TTCGAA	1 cut(s)	1638
BstC8I	GCNNGC	6 cut(s)	495, 576, 891, 925, 1156, 1563
BstDSI	CCRYGG	1 cut(s)	168
BstF5I	GGATG	1 cut(s)	1448
BstFNI	CGCG	2 cut(s)	113, 227
BstH2I	RGCGCY	1 cut(s)	150
BstHHI	GCGC	1 cut(s)	149
BstKTI	GATC	4 cut(s)	117, 204, 337, 1261
BstMAI	GTCTC	4 cut(s)	293, 358, 616, 1183
BstMBI	GATC	4 cut(s)	114, 201, 334, 1258
BstMCI	CGRYCG	1 cut(s)	563
BstNI	CCWGG	1 cut(s)	364
BstNSI	RCATGY	3 cut(s)	497, 927, 1565
BstSCI	CCNGG	5 cut(s)	362, 425, 452, 905, 1165
BstSFI	CTRYAG	1 cut(s)	545
BstSLI	GKGCMC	1 cut(s)	124
BstUI	CGCG	2 cut(s)	113, 227
BstV2I	GAAGAC	2 cut(s)	1327, 1478
BstZI	CGGCCG	1 cut(s)	560
Bsu36I	CCTNAGG	1 cut(s)	309
BsuRI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 562, 779, 1073
BtgI	CCRYGG	1 cut(s)	168
BtsCI	GGATG	1 cut(s)	1448
BtsIMutI	CAGTG	3 cut(s)	747, 1270, 1430
BtuMI	TCGCGA	1 cut(s)	113
BveI	ACCTGC	2 cut(s)	99, 559
Cac8I	GCNNGC	6 cut(s)	495, 576, 891, 925, 1156, 1563
CaiI	CAGNNNCTG	1 cut(s)	544
CciNI	GCGGCCGC	1 cut(s)	560
CfoI	GCGC	1 cut(s)	149
Cfr10I	RCCGGY	1 cut(s)	779
Cfr13I	GGNCC	5 cut(s)	99, 241, 366, 394, 1071
CseI	GACGC	1 cut(s)	1247
Csp6I	GTAC	5 cut(s)	223, 280, 876, 952, 1170
CviAII	CATG	5 cut(s)	494, 924, 1010, 1411, 1562
CviQI	GTAC	5 cut(s)	223, 280, 876, 952, 1170
DpnI	GATC	4 cut(s)	116, 203, 336, 1260
DpnII	GATC	4 cut(s)	114, 201, 334, 1258
DraIII	CACNNNGTG	1 cut(s)	1436
EaeI	YGGCCR	3 cut(s)	171, 560, 777
EagI	CGGCCG	1 cut(s)	560
Eam1104I	CTCTTC	2 cut(s)	766, 1304
EarI	CTCTTC	2 cut(s)	766, 1304
EciI	GGCGGA	1 cut(s)	432
Ecl136II	GAGCTC	1 cut(s)	265
EclXI	CGGCCG	1 cut(s)	560
Eco130I	CCWWGG	1 cut(s)	755
Eco147I	AGGCCT	2 cut(s)	341, 362
Eco24I	GRGCYC	1 cut(s)	267
Eco31I	GGTCTC	2 cut(s)	616, 1183
Eco32I	GATATC	1 cut(s)	1023
Eco47I	GGWCC	2 cut(s)	99, 366
Eco52I	CGGCCG	1 cut(s)	560
Eco53kI	GAGCTC	1 cut(s)	265
Eco57I	CTGAAG	1 cut(s)	539
Eco72I	CACGTG	1 cut(s)	86
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	3 cut(s)	123, 136, 955
EcoICRI	GAGCTC	1 cut(s)	265
EcoO109I	RGGNCCY	1 cut(s)	394
EcoRII	CCWGG	1 cut(s)	362
EcoRV	GATATC	1 cut(s)	1023
EcoT14I	CCWWGG	1 cut(s)	755
EcoT22I	ATGCAT	1 cut(s)	495
EcoT38I	GRGCYC	1 cut(s)	267
ErhI	CCWWGG	1 cut(s)	755
Esp3I	CGTCTC	1 cut(s)	293
FaeI	CATG	5 cut(s)	497, 927, 1013, 1414, 1565
FaqI	GGGAC	3 cut(s)	112, 1441, 1606
FatI	CATG	5 cut(s)	493, 923, 1009, 1410, 1561
FokI	GGATG	1 cut(s)	1435
FriOI	GRGCYC	1 cut(s)	267
FspBI	CTAG	2 cut(s)	1347, 1482
GlaI	GCGC	1 cut(s)	148
GsaI	CCCAGC	1 cut(s)	1072
HaeII	RGCGCY	1 cut(s)	150
HaeIII	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 562, 779, 1073
HapII	CCGG	6 cut(s)	189, 427, 453, 780, 906, 1166
HgaI	GACGC	1 cut(s)	1247
HhaI	GCGC	1 cut(s)	149
Hin1I	GRCGYC	1 cut(s)	1239
Hin1II	CATG	5 cut(s)	497, 927, 1013, 1414, 1565
Hin6I	GCGC	1 cut(s)	147
HinP1I	GCGC	1 cut(s)	147
HincII	GTYRAC	1 cut(s)	459
HindII	GTYRAC	1 cut(s)	459
HindIII	AAGCTT	1 cut(s)	1335
HpaII	CCGG	6 cut(s)	189, 427, 453, 780, 906, 1166
HphI	GGTGA	6 cut(s)	699, 794, 932, 1030, 1396, 1426
Hpy166II	GTNNAC	2 cut(s)	459, 1222
Hpy188III	TCNNGA	7 cut(s)	112, 916, 957, 1247, 1347, 1646, 1657
Hpy8I	GTNNAC	2 cut(s)	459, 1222
Hpy99I	CGWCG	2 cut(s)	288, 1232
HpyAV	CCTTC	8 cut(s)	305, 352, 385, 757, 1285, 1375, 1616, 1634
HpyCH4III	ACNGT	5 cut(s)	284, 370, 585, 935, 995
HpyCH4IV	ACGT	1 cut(s)	85
HpySE526I	ACGT	1 cut(s)	85
Hsp92I	GRCGYC	1 cut(s)	1239
Hsp92II	CATG	5 cut(s)	497, 927, 1013, 1414, 1565
HspAI	GCGC	1 cut(s)	147
Kzo9I	GATC	4 cut(s)	114, 201, 334, 1258
LmnI	GCTCC	3 cut(s)	46, 186, 1558
LweI	GCATC	1 cut(s)	1457
MaeI	CTAG	2 cut(s)	1347, 1482
MaeII	ACGT	1 cut(s)	85
MaeIII	GTNAC	4 cut(s)	86, 195, 823, 1384
MalI	GATC	4 cut(s)	116, 203, 336, 1260
MbiI	CCGCTC	2 cut(s)	38, 49
MboI	GATC	4 cut(s)	114, 201, 334, 1258
MhlI	GDGCHC	4 cut(s)	62, 124, 267, 375
MluCI	AATT	6 cut(s)	596, 910, 1057, 1342, 1517, 1708
MmeI	TCCRAC	1 cut(s)	156
Mph1103I	ATGCAT	1 cut(s)	495
MroXI	GAANNNNTTC	1 cut(s)	1336
MseI	TTAA	2 cut(s)	1104, 1376
MslI	CAYNNNNRTG	1 cut(s)	65
MspA1I	CMGCKG	4 cut(s)	511, 541, 559, 848
MspI	CCGG	6 cut(s)	189, 427, 453, 780, 906, 1166
MspR9I	CCNGG	5 cut(s)	364, 427, 454, 907, 1167
MvaI	CCWGG	1 cut(s)	364
MvnI	CGCG	2 cut(s)	113, 227
NciI	CCSGG	4 cut(s)	427, 454, 907, 1167
NdeII	GATC	4 cut(s)	114, 201, 334, 1258
NlaIII	CATG	5 cut(s)	497, 927, 1013, 1414, 1565
NlaIV	GGNNCC	1 cut(s)	100
NmuCI	GTSAC	4 cut(s)	86, 195, 823, 1384
NotI	GCGGCCGC	1 cut(s)	560
NruI	TCGCGA	1 cut(s)	113
NsiI	ATGCAT	1 cut(s)	495
NspI	RCATGY	3 cut(s)	497, 927, 1565
NspV	TTCGAA	1 cut(s)	1638
OliI	CACNNNNGTG	1 cut(s)	65
PaeI	GCATGC	3 cut(s)	497, 927, 1565
PaeR7I	CTCGAG	1 cut(s)	955
PaqCI	CACCTGC	1 cut(s)	559
PceI	AGGCCT	2 cut(s)	341, 362
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PdmI	GAANNNNTTC	1 cut(s)	1336
PfeI	GAWTC	5 cut(s)	229, 799, 902, 1271, 1460
PflMI	CCANNNNNTGG	1 cut(s)	1015
PfoI	TCCNGGA	1 cut(s)	905
PmaCI	CACGTG	1 cut(s)	86
PmlI	CACGTG	1 cut(s)	86
Ppu21I	YACGTR	1 cut(s)	86
Psp124BI	GAGCTC	1 cut(s)	267
Psp6I	CCWGG	1 cut(s)	362
PspCI	CACGTG	1 cut(s)	86
PspFI	CCCAGC	1 cut(s)	1068
PspGI	CCWGG	1 cut(s)	362
PspN4I	GGNNCC	1 cut(s)	100
PspPI	GGNCC	5 cut(s)	99, 241, 366, 394, 1071
PstI	CTGCAG	1 cut(s)	549
PstNI	CAGNNNCTG	1 cut(s)	544
PvuII	CAGCTG	1 cut(s)	848
RruI	TCGCGA	1 cut(s)	113
RsaI	GTAC	5 cut(s)	224, 281, 877, 953, 1171
RsaNI	GTAC	5 cut(s)	223, 280, 876, 952, 1170
RseI	CAYNNNNRTG	1 cut(s)	65
SacI	GAGCTC	1 cut(s)	267
SaqAI	TTAA	2 cut(s)	1104, 1376
Sau3AI	GATC	4 cut(s)	114, 201, 334, 1258
Sau96I	GGNCC	5 cut(s)	99, 241, 366, 394, 1071
ScaI	AGTACT	1 cut(s)	953
ScrFI	CCNGG	5 cut(s)	364, 427, 454, 907, 1167
SduI	GDGCHC	4 cut(s)	62, 124, 267, 375
SfaNI	GCATC	1 cut(s)	1457
SfcI	CTRYAG	1 cut(s)	545
Sfr274I	CTCGAG	1 cut(s)	955
SfuI	TTCGAA	1 cut(s)	1638
SinI	GGWCC	2 cut(s)	99, 366
SlaI	CTCGAG	1 cut(s)	955
SmiMI	CAYNNNNRTG	1 cut(s)	65
SmlI	CTYRAG	4 cut(s)	260, 614, 955, 1657
SmoI	CTYRAG	4 cut(s)	260, 614, 955, 1657
SphI	GCATGC	3 cut(s)	497, 927, 1565
Sse9I	AATT	6 cut(s)	596, 910, 1057, 1342, 1517, 1708
SseBI	AGGCCT	2 cut(s)	341, 362
SspI	AATATT	1 cut(s)	1618
SspMI	CTAG	2 cut(s)	1347, 1482
SstI	GAGCTC	1 cut(s)	267
StuI	AGGCCT	2 cut(s)	341, 362
StyD4I	CCNGG	5 cut(s)	362, 425, 452, 905, 1165
StyI	CCWWGG	1 cut(s)	755
TaaI	ACNGT	5 cut(s)	284, 370, 585, 935, 995
TaiI	ACGT	1 cut(s)	88
TaqI	TCGA	4 cut(s)	432, 956, 1025, 1638
TasI	AATT	6 cut(s)	596, 910, 1057, 1342, 1517, 1708
TatI	WGTACW	2 cut(s)	875, 951
TfiI	GAWTC	5 cut(s)	229, 799, 902, 1271, 1460
Tru1I	TTAA	2 cut(s)	1104, 1376
Tru9I	TTAA	2 cut(s)	1104, 1376
TscAI	CASTG	3 cut(s)	747, 1270, 1437
TseFI	GTSAC	4 cut(s)	86, 195, 823, 1384
Tsp45I	GTSAC	4 cut(s)	86, 195, 823, 1384
TspGWI	ACGGA	4 cut(s)	107, 214, 335, 783
TspRI	CASTG	3 cut(s)	747, 1270, 1437
Van91I	CCANNNNNTGG	1 cut(s)	1015
VpaK11BI	GGWCC	2 cut(s)	99, 366
XapI	RAATTY	2 cut(s)	910, 1057
XbaI	TCTAGA	1 cut(s)	1346
XceI	RCATGY	3 cut(s)	497, 927, 1565
XhoI	CTCGAG	1 cut(s)	955
XmnI	GAANNNNTTC	1 cut(s)	1336
XspI	CTAG	2 cut(s)	1347, 1482
ZrmI	AGTACT	1 cut(s)	953
Zsp2I	ATGCAT	1 cut(s)	495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.