Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0009201

Physical Location & Seq

Genomic Coordinates Forward (+)

28994949 .. 28999711

Gene Structure 4763 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG178300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGACTTCCATAACCATTTCAACACCACCAACAGAGCGGAAGCGGAGCGGTGGCTGAGCACCGCCGTGAAGCTACTGACGACACGTGACCTGCACGGGACCAAGAGCTTCGCGATCCGTGCCCGAGAGTCCGACCCGAGGCTGGGCGCCACCGACCAACTAATCGCCGTGGCCGACACGCTCCTCGCCGGAGAGTCACGGATCAACAACCAGCCGGACTGGTACGCGATTCTTCAACTGGCCCACCGCACTCACAGCCTTGAGCTCGTGGCGACTCAGTACCGTCGTCTCGCCCTTCTCCTCAACCCTCAGGCCAATCGGTTTCCTTACGCCGATCAGGCCTTCCGTCTTGTCTCCGAGGCCTGGACCGTGCTCTCAAACCCCTCCAAGAAGGCCCTCTACGACCACGACTTGAATATCTACTCCCGGTTCGACTCGCCTCCGCCCTCCTCCGGGTCAACTCAGTTGTTTGAAAGGCAGTTCTTGCAAATGCATGCACCACCACCGCCGCCGCTGCAACCACCGCAACAACCATTTCAACAGCTGCTGCAGCCACTTCAGCGGCCGCAGCAGCTGCAGGCTCAACCGTTTCCGCACCAATTACAACCGCAACCACTTGAGCAGAGACCGCAACCGCCACCTCAGACACAAGAAAAGCGACAGCCGCCACCGCCGCCGCCGCCGCCGCAAAATCAACAATCACCACAGAAGCAGCAGCAGCAGCAGAATAAGCCAGTGAGAAAAAGCCCAAGGAAGAAGGACGGAAGAGTGGCCGGTGAGGGAGAAACGCCGAATCCTAACAATGTGGCTAACAATGTGACTGAGTTTGAGTCTGAGTCAGCTGCCCCTCTCCCATCTGAGTCGCTTAGTACAACTCAGGTGCAAGCGGAGTCTGATTCCGGGAATTTCTGGACGGCATGCCCCTATTGTTATCACCTCTTTGAGTACTCGAGAGTTTATGAGGAGTGTATGCTTCGGTGTCAAAACTGTAAGAGGGCTTTCCATGCGGTGGTGATATCGACACCGCCTGTGATGGACAATGGGGAAGCAAATTTCTGCTGCTGGGCCTATTTCCCAATGGGGTTATCAGGGAGTGCTAAAGATACAGGAGGGTCATCTAACTGGACTCCCTTTTCAACTATGTTTGCTTGCCCTTTACCGGGTACTAAGAAGAAAGTTGGGAGACCTAAGAACGCTGCTGTGGGGTCAAGGGTTTACTACGACGATGATGACGCCTTTCTTGACATTTCCGATCCCAGTGAGGAATCCGATGATGAGTGGCAGAAGGATAAGAGGAGGAAGAAGAGAGCAGGAAGACCAAAAGGAAAAGCTTCCACTTCTAGAACCCCTGCAAGAGCTTCGGAGAGATTGAGGAGGGGGACTCAAAATGTTGGTGGGCAGGGCATGGTGAGTAATGGCGGGACACTGGGTGCTGTGTCTGCATCCAATGGGGAATCCAGTAAGAAGACAAGTGCTAGTGCAAGAAAGCGAGGTGCTGCTGCGTTGGGGAAATTGGATTTGAATGTGGAGTTTAGTAATAATGAGGTAGAGGAGCATGCTGCTCAGACAATGAGTGATGGGAACGGGACAGCAAATGGGGAGGAGGATAATATTGAAGGGATTGAGTTCTTCGAAGGTCTTGATGAGTTCTTGAGCAGTCTACCCATACTCAATGTTGTTGGCAATGACAAGGTAAAGGCTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ

Protein Analysis

568

Amino Acids

62.99

Weight (kDa)

7.61

Isoelectric Point (pI)

59.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	73 - 135	4.4e-12	DnaJ domain
Zn_ribbon_20	PF23551	303 - 337	2.3e-07	Zinc beta-ribbon domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009201)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09540 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360
malus_domestica	MD10G1054200.v1.1
prunus_persica	Prupe.8G069000_v2.0.a1
pyrus_communis	pycom05g03930 pycom10g04110
rosa_chinensis	RchiOBHm_Chr6g0271111
rosa_laevigata	RLG00000013746
rosa_multiflora	Rmu_sc0005953.1_g000011
rosa_roxburghii	Rroxscaffold_7G00197300
rosa_rugosa	Rorug06G0058400
rosa_samantha	Rh6AG178300 Rh6BG181900 Rh6CG177400 Rh6DG169500
rosa_wichuraiana	Rw6G015230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	99
AccB1I	GGYRCC	1 cut(s)	146
AccB7I	CCANNNNNTGG	1 cut(s)	1009
AccBSI	CCGCTC	2 cut(s)	38, 49
AccI	GTMKAC	1 cut(s)	1660
AccII	CGCG	2 cut(s)	113, 227
AclWI	GGATC	3 cut(s)	109, 209, 1247
AcoI	YGGCCR	3 cut(s)	171, 563, 771
AcsI	RAATTY	2 cut(s)	904, 1051
AcuI	CTGAAG	1 cut(s)	542
AcvI	CACGTG	1 cut(s)	86
AcyI	GRCGYC	2 cut(s)	147, 1233
AdeI	CACNNNGTG	1 cut(s)	1430
AfaI	GTAC	5 cut(s)	224, 281, 871, 947, 1165
AfiI	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1009, 1159, 1160
AflIII	ACRYGT	1 cut(s)	83
AgsI	TTSAA	8 cut(s)	22, 236, 415, 473, 539, 1137, 1522, 1616
AjnI	CCWGG	1 cut(s)	362
AleI	CACNNNNGTG	1 cut(s)	65
AluBI	AGCT	8 cut(s)	73, 108, 265, 544, 574, 842, 1331, 1358
AluI	AGCT	8 cut(s)	73, 108, 265, 544, 574, 842, 1331, 1358
Alw21I	GWGCWC	3 cut(s)	62, 267, 375
Alw26I	GTCTC	4 cut(s)	293, 358, 619, 1177
AlwI	GGATC	3 cut(s)	109, 209, 1247
AlwNI	CAGNNNCTG	2 cut(s)	547, 574
Ama87I	CYCGRG	3 cut(s)	123, 136, 949
AoxI	GGCC	9 cut(s)	171, 240, 312, 339, 360, 393, 563, 771, 1065
ApoI	RAATTY	2 cut(s)	904, 1051
Asp700I	GAANNNNTTC	1 cut(s)	1330
AspLEI	GCGC	1 cut(s)	149
AspS9I	GGNCC	5 cut(s)	99, 241, 366, 394, 1065
AsuC2I	CCSGG	4 cut(s)	427, 454, 901, 1161
AsuHPI	GGTGA	5 cut(s)	693, 788, 926, 1024, 1420
AsuII	TTCGAA	1 cut(s)	1632
AvaI	CYCGRG	3 cut(s)	123, 136, 949
AvaII	GGWCC	2 cut(s)	99, 366
AxyI	CCTNAGG	1 cut(s)	309
BaeGI	GKGCMC	1 cut(s)	124
BanI	GGYRCC	1 cut(s)	146
BanII	GRGCYC	1 cut(s)	267
BarI	GAAGNNNNNNTAC	2 cut(s)	383, 415
BauI	CACGAG	1 cut(s)	266
BbrPI	CACGTG	1 cut(s)	86
BbsI	GAAGAC	2 cut(s)	1321, 1472
Bbv12I	GWGCWC	3 cut(s)	62, 267, 375
BccI	CCATC	3 cut(s)	862, 1027, 1571
BceAI	ACGGC	3 cut(s)	50, 152, 930
BcgI	CGANNNNNNTGC	2 cut(s)	1341, 1375
BciT130I	CCWGG	1 cut(s)	364
BcnI	CCSGG	4 cut(s)	427, 454, 901, 1161
BcoDI	GTCTC	4 cut(s)	293, 358, 619, 1177
BfaI	CTAG	2 cut(s)	1341, 1476
BfmI	CTRYAG	2 cut(s)	548, 575
BfoI	RGCGCY	1 cut(s)	150
BfuAI	ACCTGC	1 cut(s)	99
BglI	GCCNNNNNGGC	1 cut(s)	338
BlpI	GCTNAGC	1 cut(s)	56
BmcAI	AGTACT	1 cut(s)	947
Bme1390I	CCNGG	5 cut(s)	364, 427, 454, 901, 1161
Bme18I	GGWCC	2 cut(s)	99, 366
BmeT110I	CYCGRG	3 cut(s)	123, 136, 949
BmgT120I	GGNCC	5 cut(s)	99, 241, 366, 394, 1065
BmiI	GGNNCC	2 cut(s)	100, 148
BmrFI	CCNGG	5 cut(s)	364, 427, 454, 901, 1161
BmrI	ACTGGG	2 cut(s)	1251, 1436
BmsI	GCATC	1 cut(s)	1451
BmuI	ACTGGG	2 cut(s)	1251, 1436
BpiI	GAAGAC	2 cut(s)	1321, 1472
BplI	GAGNNNNNCTC	2 cut(s)	1366, 1398
Bpu1102I	GCTNAGC	1 cut(s)	56
Bpu14I	TTCGAA	1 cut(s)	1632
BpuEI	CTTGAG	3 cut(s)	281, 638, 1672
BpuMI	CCSGG	4 cut(s)	427, 454, 901, 1161
BsaAI	YACGTR	1 cut(s)	86
BsaHI	GRCGYC	2 cut(s)	147, 1233
BsaI	GGTCTC	2 cut(s)	619, 1177
BsaJI	CCNNGG	4 cut(s)	137, 168, 357, 749
Bsc4I	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1009, 1159, 1160
Bse118I	RCCGGY	1 cut(s)	773
Bse1I	ACTGG	7 cut(s)	224, 243, 734, 1127, 1257, 1431, 1458
Bse21I	CCTNAGG	1 cut(s)	309
Bse3DI	GCAATG	1 cut(s)	1690
BseBI	CCWGG	1 cut(s)	364
BseDI	CCNNGG	4 cut(s)	137, 168, 357, 749
BseGI	GGATG	1 cut(s)	1442
BseLI	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1009, 1159, 1160
BseMI	GCAATG	1 cut(s)	1690
BseNI	ACTGG	7 cut(s)	224, 243, 734, 1127, 1257, 1431, 1458
BseRI	GAGGAG	8 cut(s)	173, 290, 439, 977, 1309, 1387, 1565, 1616
BseSI	GKGCMC	1 cut(s)	124
BseX3I	CGGCCG	1 cut(s)	563
BseYI	CCCAGC	2 cut(s)	142, 1062
BsgI	GTGCAG	1 cut(s)	77
Bsh1236I	CGCG	2 cut(s)	113, 227
Bsh1285I	CGRYCG	1 cut(s)	566
BshFI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 565, 773, 1067
BshNI	GGYRCC	1 cut(s)	146
BsiEI	CGRYCG	1 cut(s)	566
BsiHKAI	GWGCWC	3 cut(s)	62, 267, 375
BsiHKCI	CYCGRG	3 cut(s)	123, 136, 949
BsiSI	CCGG	7 cut(s)	189, 215, 427, 453, 774, 900, 1160
BslFI	GGGAC	4 cut(s)	112, 1393, 1435, 1600
BslI	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1009, 1159, 1160
BsmAI	GTCTC	4 cut(s)	293, 358, 619, 1177
BsmBI	CGTCTC	1 cut(s)	293
BsmFI	GGGAC	4 cut(s)	112, 1393, 1435, 1600
BsnI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 565, 773, 1067
Bso31I	GGTCTC	2 cut(s)	619, 1177
BsoBI	CYCGRG	3 cut(s)	123, 136, 949
Bsp119I	TTCGAA	1 cut(s)	1632
Bsp1286I	GDGCHC	4 cut(s)	62, 124, 267, 375
Bsp143I	GATC	4 cut(s)	114, 201, 334, 1252
Bsp1720I	GCTNAGC	1 cut(s)	56
Bsp68I	TCGCGA	1 cut(s)	113
BspANI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 565, 773, 1067
BspFNI	CGCG	2 cut(s)	113, 227
BspLI	GGNNCC	2 cut(s)	100, 148
BspMAI	CTGCAG	2 cut(s)	552, 579
BspMI	ACCTGC	1 cut(s)	99
BspPI	GGATC	3 cut(s)	109, 209, 1247
BspT104I	TTCGAA	1 cut(s)	1632
BspT107I	GGYRCC	1 cut(s)	146
BspTNI	GGTCTC	2 cut(s)	619, 1177
BsrBI	CCGCTC	2 cut(s)	38, 49
BsrDI	GCAATG	1 cut(s)	1690
BsrFI	RCCGGY	1 cut(s)	773
BsrI	ACTGG	7 cut(s)	224, 243, 734, 1127, 1257, 1431, 1458
BssAI	RCCGGY	1 cut(s)	773
BssECI	CCNNGG	4 cut(s)	137, 168, 357, 749
BssMI	GATC	4 cut(s)	114, 201, 334, 1252
BssNI	GRCGYC	2 cut(s)	147, 1233
BssSI	CACGAG	1 cut(s)	266
BssT1I	CCWWGG	1 cut(s)	749
Bst2BI	CACGAG	1 cut(s)	266
Bst2UI	CCWGG	1 cut(s)	364
Bst4CI	ACNGT	4 cut(s)	284, 370, 588, 989
Bst6I	CTCTTC	2 cut(s)	760, 1298
BstACI	GRCGYC	2 cut(s)	147, 1233
BstAPI	GCANNNNNTGC	2 cut(s)	484, 574
BstBAI	YACGTR	1 cut(s)	86
BstBI	TTCGAA	1 cut(s)	1632
BstC8I	GCNNGC	6 cut(s)	495, 579, 885, 919, 1150, 1557
BstDSI	CCRYGG	1 cut(s)	168
BstF5I	GGATG	1 cut(s)	1442
BstFNI	CGCG	2 cut(s)	113, 227
BstH2I	RGCGCY	1 cut(s)	150
BstHHI	GCGC	1 cut(s)	149
BstKTI	GATC	4 cut(s)	117, 204, 337, 1255
BstMAI	GTCTC	4 cut(s)	293, 358, 619, 1177
BstMBI	GATC	4 cut(s)	114, 201, 334, 1252
BstMCI	CGRYCG	1 cut(s)	566
BstNI	CCWGG	1 cut(s)	364
BstNSI	RCATGY	3 cut(s)	497, 921, 1559
BstSCI	CCNGG	5 cut(s)	362, 425, 452, 899, 1159
BstSFI	CTRYAG	2 cut(s)	548, 575
BstSLI	GKGCMC	1 cut(s)	124
BstUI	CGCG	2 cut(s)	113, 227
BstV2I	GAAGAC	2 cut(s)	1321, 1472
BstZI	CGGCCG	1 cut(s)	563
Bsu36I	CCTNAGG	1 cut(s)	309
BsuRI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 565, 773, 1067
BtgI	CCRYGG	1 cut(s)	168
BtsCI	GGATG	1 cut(s)	1442
BtsIMutI	CAGTG	3 cut(s)	741, 1264, 1424
BtuMI	TCGCGA	1 cut(s)	113
BveI	ACCTGC	1 cut(s)	99
Cac8I	GCNNGC	6 cut(s)	495, 579, 885, 919, 1150, 1557
CaiI	CAGNNNCTG	2 cut(s)	547, 574
CciNI	GCGGCCGC	1 cut(s)	563
CfoI	GCGC	1 cut(s)	149
Cfr10I	RCCGGY	1 cut(s)	773
Cfr13I	GGNCC	5 cut(s)	99, 241, 366, 394, 1065
CseI	GACGC	1 cut(s)	1241
Csp6I	GTAC	5 cut(s)	223, 280, 870, 946, 1164
CviAII	CATG	5 cut(s)	494, 918, 1004, 1405, 1556
CviQI	GTAC	5 cut(s)	223, 280, 870, 946, 1164
DinI	GGCGCC	1 cut(s)	148
DpnI	GATC	4 cut(s)	116, 203, 336, 1254
DpnII	GATC	4 cut(s)	114, 201, 334, 1252
DraIII	CACNNNGTG	1 cut(s)	1430
EaeI	YGGCCR	3 cut(s)	171, 563, 771
EagI	CGGCCG	1 cut(s)	563
Eam1104I	CTCTTC	2 cut(s)	760, 1298
EarI	CTCTTC	2 cut(s)	760, 1298
EciI	GGCGGA	1 cut(s)	432
Ecl136II	GAGCTC	1 cut(s)	265
EclXI	CGGCCG	1 cut(s)	563
Eco130I	CCWWGG	1 cut(s)	749
Eco147I	AGGCCT	2 cut(s)	341, 362
Eco24I	GRGCYC	1 cut(s)	267
Eco31I	GGTCTC	2 cut(s)	619, 1177
Eco32I	GATATC	1 cut(s)	1017
Eco47I	GGWCC	2 cut(s)	99, 366
Eco52I	CGGCCG	1 cut(s)	563
Eco53kI	GAGCTC	1 cut(s)	265
Eco57I	CTGAAG	1 cut(s)	542
Eco72I	CACGTG	1 cut(s)	86
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	3 cut(s)	123, 136, 949
EcoICRI	GAGCTC	1 cut(s)	265
EcoO109I	RGGNCCY	1 cut(s)	394
EcoRII	CCWGG	1 cut(s)	362
EcoRV	GATATC	1 cut(s)	1017
EcoT14I	CCWWGG	1 cut(s)	749
EcoT22I	ATGCAT	1 cut(s)	495
EcoT38I	GRGCYC	1 cut(s)	267
EgeI	GGCGCC	1 cut(s)	148
EheI	GGCGCC	1 cut(s)	148
ErhI	CCWWGG	1 cut(s)	749
Esp3I	CGTCTC	1 cut(s)	293
FaeI	CATG	5 cut(s)	497, 921, 1007, 1408, 1559
FaqI	GGGAC	4 cut(s)	112, 1393, 1435, 1600
FatI	CATG	5 cut(s)	493, 917, 1003, 1404, 1555
FauI	CCCGC	1 cut(s)	1412
FblI	GTMKAC	1 cut(s)	1660
FokI	GGATG	1 cut(s)	1429
FriOI	GRGCYC	1 cut(s)	267
FspBI	CTAG	2 cut(s)	1341, 1476
GlaI	GCGC	1 cut(s)	148
GsaI	CCCAGC	2 cut(s)	146, 1066
HaeII	RGCGCY	1 cut(s)	150
HaeIII	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 565, 773, 1067
HapII	CCGG	7 cut(s)	189, 215, 427, 453, 774, 900, 1160
HgaI	GACGC	1 cut(s)	1241
HhaI	GCGC	1 cut(s)	149
Hin1I	GRCGYC	2 cut(s)	147, 1233
Hin1II	CATG	5 cut(s)	497, 921, 1007, 1408, 1559
Hin6I	GCGC	1 cut(s)	147
HinP1I	GCGC	1 cut(s)	147
HincII	GTYRAC	1 cut(s)	459
HindII	GTYRAC	1 cut(s)	459
HindIII	AAGCTT	1 cut(s)	1329
HpaII	CCGG	7 cut(s)	189, 215, 427, 453, 774, 900, 1160
HphI	GGTGA	5 cut(s)	693, 788, 926, 1024, 1420
Hpy166II	GTNNAC	3 cut(s)	459, 1216, 1661
Hpy188III	TCNNGA	7 cut(s)	112, 910, 951, 1241, 1341, 1640, 1651
Hpy8I	GTNNAC	3 cut(s)	459, 1216, 1661
Hpy99I	CGWCG	2 cut(s)	288, 1226
HpyAV	CCTTC	7 cut(s)	305, 352, 385, 751, 1279, 1610, 1628
HpyCH4III	ACNGT	4 cut(s)	284, 370, 588, 989
HpyCH4IV	ACGT	1 cut(s)	85
HpySE526I	ACGT	1 cut(s)	85
Hsp92I	GRCGYC	2 cut(s)	147, 1233
Hsp92II	CATG	5 cut(s)	497, 921, 1007, 1408, 1559
HspAI	GCGC	1 cut(s)	147
KasI	GGCGCC	1 cut(s)	146
Kzo9I	GATC	4 cut(s)	114, 201, 334, 1252
LmnI	GCTCC	3 cut(s)	46, 186, 1552
LweI	GCATC	1 cut(s)	1451
MaeI	CTAG	2 cut(s)	1341, 1476
MaeII	ACGT	1 cut(s)	85
MaeIII	GTNAC	3 cut(s)	86, 195, 817
MalI	GATC	4 cut(s)	116, 203, 336, 1254
MbiI	CCGCTC	2 cut(s)	38, 49
MboI	GATC	4 cut(s)	114, 201, 334, 1252
MboII	GAAGA	9 cut(s)	224, 766, 777, 1183, 1312, 1315, 1326, 1477, 1621
MhlI	GDGCHC	4 cut(s)	62, 124, 267, 375
MluCI	AATT	5 cut(s)	599, 904, 1051, 1511, 1702
Mly113I	GGCGCC	1 cut(s)	147
MmeI	TCCRAC	1 cut(s)	156
Mph1103I	ATGCAT	1 cut(s)	495
MroXI	GAANNNNTTC	1 cut(s)	1330
MslI	CAYNNNNRTG	1 cut(s)	65
MspA1I	CMGCKG	5 cut(s)	514, 544, 562, 574, 842
MspI	CCGG	7 cut(s)	189, 215, 427, 453, 774, 900, 1160
MspR9I	CCNGG	5 cut(s)	364, 427, 454, 901, 1161
MvaI	CCWGG	1 cut(s)	364
MvnI	CGCG	2 cut(s)	113, 227
NarI	GGCGCC	1 cut(s)	147
NciI	CCSGG	4 cut(s)	427, 454, 901, 1161
NdeII	GATC	4 cut(s)	114, 201, 334, 1252
NlaIII	CATG	5 cut(s)	497, 921, 1007, 1408, 1559
NlaIV	GGNNCC	2 cut(s)	100, 148
NmuCI	GTSAC	3 cut(s)	86, 195, 817
NotI	GCGGCCGC	1 cut(s)	563
NruI	TCGCGA	1 cut(s)	113
NsiI	ATGCAT	1 cut(s)	495
NspI	RCATGY	3 cut(s)	497, 921, 1559
NspV	TTCGAA	1 cut(s)	1632
OliI	CACNNNNGTG	1 cut(s)	65
PaeI	GCATGC	3 cut(s)	497, 921, 1559
PaeR7I	CTCGAG	1 cut(s)	949
PceI	AGGCCT	2 cut(s)	341, 362
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PdmI	GAANNNNTTC	1 cut(s)	1330
PfeI	GAWTC	5 cut(s)	229, 793, 896, 1265, 1454
PflMI	CCANNNNNTGG	1 cut(s)	1009
PfoI	TCCNGGA	1 cut(s)	899
PluTI	GGCGCC	1 cut(s)	150
PmaCI	CACGTG	1 cut(s)	86
PmlI	CACGTG	1 cut(s)	86
Ppu21I	YACGTR	1 cut(s)	86
Psp124BI	GAGCTC	1 cut(s)	267
Psp6I	CCWGG	1 cut(s)	362
PspCI	CACGTG	1 cut(s)	86
PspFI	CCCAGC	2 cut(s)	142, 1062
PspGI	CCWGG	1 cut(s)	362
PspN4I	GGNNCC	2 cut(s)	100, 148
PspPI	GGNCC	5 cut(s)	99, 241, 366, 394, 1065
PstI	CTGCAG	2 cut(s)	552, 579
PstNI	CAGNNNCTG	2 cut(s)	547, 574
PvuII	CAGCTG	3 cut(s)	544, 574, 842
RruI	TCGCGA	1 cut(s)	113
RsaI	GTAC	5 cut(s)	224, 281, 871, 947, 1165
RsaNI	GTAC	5 cut(s)	223, 280, 870, 946, 1164
RseI	CAYNNNNRTG	1 cut(s)	65
SacI	GAGCTC	1 cut(s)	267
Sau3AI	GATC	4 cut(s)	114, 201, 334, 1252
Sau96I	GGNCC	5 cut(s)	99, 241, 366, 394, 1065
ScaI	AGTACT	1 cut(s)	947
ScrFI	CCNGG	5 cut(s)	364, 427, 454, 901, 1161
SduI	GDGCHC	4 cut(s)	62, 124, 267, 375
SfaNI	GCATC	1 cut(s)	1451
SfcI	CTRYAG	2 cut(s)	548, 575
SfoI	GGCGCC	1 cut(s)	148
Sfr274I	CTCGAG	1 cut(s)	949
SfuI	TTCGAA	1 cut(s)	1632
SinI	GGWCC	2 cut(s)	99, 366
SlaI	CTCGAG	1 cut(s)	949
SmiMI	CAYNNNNRTG	1 cut(s)	65
SmlI	CTYRAG	4 cut(s)	260, 617, 949, 1651
SmoI	CTYRAG	4 cut(s)	260, 617, 949, 1651
SphI	GCATGC	3 cut(s)	497, 921, 1559
Sse9I	AATT	5 cut(s)	599, 904, 1051, 1511, 1702
SseBI	AGGCCT	2 cut(s)	341, 362
SspDI	GGCGCC	1 cut(s)	146
SspI	AATATT	1 cut(s)	1612
SspMI	CTAG	2 cut(s)	1341, 1476
SstI	GAGCTC	1 cut(s)	267
StuI	AGGCCT	2 cut(s)	341, 362
StyD4I	CCNGG	5 cut(s)	362, 425, 452, 899, 1159
StyI	CCWWGG	1 cut(s)	749
TaaI	ACNGT	4 cut(s)	284, 370, 588, 989
TaiI	ACGT	1 cut(s)	88
TaqI	TCGA	4 cut(s)	432, 950, 1019, 1632
TasI	AATT	5 cut(s)	599, 904, 1051, 1511, 1702
TatI	WGTACW	2 cut(s)	869, 945
TfiI	GAWTC	5 cut(s)	229, 793, 896, 1265, 1454
TscAI	CASTG	3 cut(s)	741, 1264, 1431
TseFI	GTSAC	3 cut(s)	86, 195, 817
Tsp45I	GTSAC	3 cut(s)	86, 195, 817
TspGWI	ACGGA	4 cut(s)	107, 214, 335, 777
TspRI	CASTG	3 cut(s)	741, 1264, 1431
Van91I	CCANNNNNTGG	1 cut(s)	1009
VpaK11BI	GGWCC	2 cut(s)	99, 366
XapI	RAATTY	2 cut(s)	904, 1051
XbaI	TCTAGA	1 cut(s)	1340
XceI	RCATGY	3 cut(s)	497, 921, 1559
XhoI	CTCGAG	1 cut(s)	949
XmiI	GTMKAC	1 cut(s)	1660
XmnI	GAANNNNTTC	1 cut(s)	1330
XspI	CTAG	2 cut(s)	1341, 1476
ZrmI	AGTACT	1 cut(s)	947
Zsp2I	ATGCAT	1 cut(s)	495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.