Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0009201

Physical Location & Seq

Genomic Coordinates Forward (+)

25222308 .. 25224432

Gene Structure 2125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG177400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGGACTTCCATAACCATTTCAACACCACCAACAGAGCGGAAGCGGAGCGGTGGCTGAGCACCGCCGTGAAGCTACTGACGACACGTGACCTGCACGGGACCAAGAGCTTCGCGATCCGTGCCCGAGAGTCCGACCCGAGGCTGGGCGCCACCGACCAACTAATCGCCGTGGCCGACACGCTCCTCGCCGGAGAGTCACGGATCAACAACCAGCCCGACTGGTACGCGGTTCTTCAACTGGCCCACCGCACTCACAGCCTTGAGCTCGTGGCGACTCAGTACCGTCGTCTCGCCCTTCTCCTCAACCCTCAGGCCAATCGGTTTCCTTACGCCGATCAGGCCTTCCGTCTCGTCTCCGAGGCCTGGACCGTGCTCTCAAACCCCTCCAAGAAGGCCCTCTACGACCACGACTTGAATATCTACTCCCGGTTCGACTCGCCTCCGCCCTCCTCCGGGTCAACTCAGTTGTTTGAAAGGCAGTTCTTGCAAATGCATGCACCGCCGCCGCCGCCGCTGCAACAATCGCAACAACCATTTCAACAGCGGCTGCAGCCACTTCAGCGGCCGCAGCAGCTGCAGGCTCAACCGTTTCCGCACCAATTACAACCGCAACCACTTGAGCAGAGACCACAACCGCCGCAACCGCCACCTCAGACACAAGAAAAGCGACAGCCGCCACCACCGCCGCCGCCGCCGCCGCAAAATCAACAATCACCACAGAAGCAGCAGCAGCAGCAGAATAAGCCAGTGAGAAAAAGCCCAAGGAAGAAGGACGGAAGAGTGGCCGGTGAGGGAGAAACGCCGAATCCTAACAATGTGGCTAACAATGTGACTGAGTTTGAGTCAGAGTCAGCTGCCCCTCTCCCATCTGAGTCGCTTAGTACAACTCAGGTGCAGGCGGAGTCTGATTCCGGGAATTTCTGGACGGCATGCCCCTACTGTTATCACCTCTTTGAGTACTCGAGAGTTTATGAGGAGTGTATGCTTCGGTGTCAAAACTGTAAGAGGGCTTTCCATGCGGTGGTGATATCGACACCGCCTGTGGTGGACAATGGGGAAGCAAATTTCTGCTGCTGGGCCTATTTCCCAATGGGGTTATCAGGGAGTGTTAAAGATACAGGAGGGTCATCTAACTGGACTCCCTTTTCAACTATGTTTGCTTGCCCTTTACCGGGTACTAAGAAGAAAGTTGGGAGACCTAAGAACGCTGCTGTGGGGTCAAGGGTTTACTACGACGATGATGACGCCTTTCTTGACATTTCCGATCCCAGTGAGGAATCCGATGATGAGTGGCAGAAGGATAAGAGGAGGAAGAAGAGAGCAGGAAGACCAAAAGGAAAAGCTTCCACTTCTAGAACCCCTGCAAGAGCTTCGGAGAGATTAAGGAAGGGGACTCAAAATGTTGGTGGGCAGGGCATGGTGAGTAATGGTGGGACACTGGGTGCTGTGTCTGCATCCAATGGGGAATCCAGTAAGAAGACAAGTGCTAGTGCAAGAAAGCGAGGTGCTGCTGCGTTGGGGAAATTGGATTTGAATGTGGAGTTCAGTAATAATGAGGTAGAGGAGCATGCTGCTCAGACAATGAGTGATGGGAACGGGACAGCAAATGGGGAGGAGGATAATATTGAAGGGATTGAGTTCTTCGAAGGTCTTGATGAGTTCTTGAGCAGTCTGCCCATACTCAATGTTGTTGGCAGTGACAAGGTAAAGGCTAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ

Protein Analysis

572

Amino Acids

63.4

Weight (kDa)

8.02

Isoelectric Point (pI)

59.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	73 - 135	5.8e-12	DnaJ domain
Zn_ribbon_20	PF23551	307 - 341	2.3e-07	Zinc beta-ribbon domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0009201)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G09540 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360 AT5G64360
malus_domestica	MD10G1054200.v1.1
prunus_persica	Prupe.8G069000_v2.0.a1
pyrus_communis	pycom05g03930 pycom10g04110
rosa_chinensis	RchiOBHm_Chr6g0271111
rosa_laevigata	RLG00000013746
rosa_multiflora	Rmu_sc0005953.1_g000011
rosa_roxburghii	Rroxscaffold_7G00197300
rosa_rugosa	Rorug06G0058400
rosa_samantha	Rh6AG178300 Rh6BG181900 Rh6CG177400 Rh6DG169500
rosa_wichuraiana	Rw6G015230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	99
AccB1I	GGYRCC	1 cut(s)	146
AccB7I	CCANNNNNTGG	1 cut(s)	1021
AccBSI	CCGCTC	2 cut(s)	38, 49
AccII	CGCG	2 cut(s)	113, 227
AclWI	GGATC	3 cut(s)	109, 209, 1259
AcoI	YGGCCR	3 cut(s)	171, 563, 783
AcsI	RAATTY	2 cut(s)	916, 1063
AcuI	CTGAAG	1 cut(s)	542
AcvI	CACGTG	1 cut(s)	86
AcyI	GRCGYC	2 cut(s)	147, 1245
AdeI	CACNNNGTG	1 cut(s)	1442
AfaI	GTAC	5 cut(s)	224, 281, 883, 959, 1177
AfiI	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1021, 1171, 1172
AflIII	ACRYGT	1 cut(s)	83
AgsI	TTSAA	8 cut(s)	22, 236, 415, 473, 539, 1149, 1534, 1628
AjnI	CCWGG	1 cut(s)	362
AleI	CACNNNNGTG	1 cut(s)	65
AluBI	AGCT	7 cut(s)	73, 108, 265, 574, 854, 1343, 1370
AluI	AGCT	7 cut(s)	73, 108, 265, 574, 854, 1343, 1370
Alw21I	GWGCWC	3 cut(s)	62, 267, 375
Alw26I	GTCTC	5 cut(s)	293, 353, 358, 619, 1189
AlwI	GGATC	3 cut(s)	109, 209, 1259
AlwNI	CAGNNNCTG	2 cut(s)	547, 574
Ama87I	CYCGRG	3 cut(s)	123, 136, 961
AoxI	GGCC	9 cut(s)	171, 240, 312, 339, 360, 393, 563, 783, 1077
ApoI	RAATTY	2 cut(s)	916, 1063
Asp700I	GAANNNNTTC	1 cut(s)	1342
AspLEI	GCGC	1 cut(s)	149
AspS9I	GGNCC	5 cut(s)	99, 241, 366, 394, 1077
AsuC2I	CCSGG	4 cut(s)	427, 454, 913, 1173
AsuHPI	GGTGA	5 cut(s)	705, 800, 938, 1036, 1432
AsuII	TTCGAA	1 cut(s)	1644
AvaI	CYCGRG	3 cut(s)	123, 136, 961
AvaII	GGWCC	2 cut(s)	99, 366
AxyI	CCTNAGG	1 cut(s)	309
BaeGI	GKGCMC	1 cut(s)	124
BanI	GGYRCC	1 cut(s)	146
BanII	GRGCYC	1 cut(s)	267
BarI	GAAGNNNNNNTAC	2 cut(s)	383, 415
BauI	CACGAG	1 cut(s)	266
BbrPI	CACGTG	1 cut(s)	86
BbsI	GAAGAC	2 cut(s)	1333, 1484
Bbv12I	GWGCWC	3 cut(s)	62, 267, 375
BccI	CCATC	2 cut(s)	874, 1583
BceAI	ACGGC	3 cut(s)	50, 152, 942
BcgI	CGANNNNNNTGC	2 cut(s)	1353, 1387
BciT130I	CCWGG	1 cut(s)	364
BcnI	CCSGG	4 cut(s)	427, 454, 913, 1173
BcoDI	GTCTC	5 cut(s)	293, 353, 358, 619, 1189
BfaI	CTAG	2 cut(s)	1353, 1488
BfmI	CTRYAG	2 cut(s)	548, 575
BfoI	RGCGCY	1 cut(s)	150
BfuAI	ACCTGC	1 cut(s)	99
BglI	GCCNNNNNGGC	1 cut(s)	338
BlpI	GCTNAGC	1 cut(s)	56
BmcAI	AGTACT	1 cut(s)	959
Bme1390I	CCNGG	5 cut(s)	364, 427, 454, 913, 1173
Bme18I	GGWCC	2 cut(s)	99, 366
BmeT110I	CYCGRG	3 cut(s)	123, 136, 961
BmgT120I	GGNCC	5 cut(s)	99, 241, 366, 394, 1077
BmiI	GGNNCC	2 cut(s)	100, 148
BmrFI	CCNGG	5 cut(s)	364, 427, 454, 913, 1173
BmrI	ACTGGG	2 cut(s)	1263, 1448
BmsI	GCATC	1 cut(s)	1463
BmuI	ACTGGG	2 cut(s)	1263, 1448
BpiI	GAAGAC	2 cut(s)	1333, 1484
Bpu1102I	GCTNAGC	1 cut(s)	56
Bpu14I	TTCGAA	1 cut(s)	1644
BpuEI	CTTGAG	3 cut(s)	281, 638, 1684
BpuMI	CCSGG	4 cut(s)	427, 454, 913, 1173
BsaAI	YACGTR	1 cut(s)	86
BsaHI	GRCGYC	2 cut(s)	147, 1245
BsaI	GGTCTC	2 cut(s)	619, 1189
BsaJI	CCNNGG	4 cut(s)	137, 168, 357, 761
Bsc4I	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1021, 1171, 1172
Bse118I	RCCGGY	1 cut(s)	785
Bse1I	ACTGG	7 cut(s)	224, 243, 746, 1139, 1269, 1443, 1470
Bse21I	CCTNAGG	1 cut(s)	309
BseBI	CCWGG	1 cut(s)	364
BseDI	CCNNGG	4 cut(s)	137, 168, 357, 761
BseGI	GGATG	1 cut(s)	1454
BseLI	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1021, 1171, 1172
BseMII	CTCAG	9 cut(s)	47, 290, 323, 476, 665, 825, 861, 902, 1589
BseNI	ACTGG	7 cut(s)	224, 243, 746, 1139, 1269, 1443, 1470
BseRI	GAGGAG	7 cut(s)	173, 290, 439, 989, 1321, 1577, 1628
BseSI	GKGCMC	1 cut(s)	124
BseX3I	CGGCCG	1 cut(s)	563
BseYI	CCCAGC	2 cut(s)	142, 1074
BsgI	GTGCAG	2 cut(s)	77, 914
Bsh1236I	CGCG	2 cut(s)	113, 227
Bsh1285I	CGRYCG	1 cut(s)	566
BshFI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 565, 785, 1079
BshNI	GGYRCC	1 cut(s)	146
BsiEI	CGRYCG	1 cut(s)	566
BsiHKAI	GWGCWC	3 cut(s)	62, 267, 375
BsiHKCI	CYCGRG	3 cut(s)	123, 136, 961
BsiSI	CCGG	6 cut(s)	189, 427, 453, 786, 912, 1172
BslFI	GGGAC	4 cut(s)	112, 1405, 1447, 1612
BslI	CCNNNNNNNGG	9 cut(s)	138, 142, 143, 363, 452, 453, 1021, 1171, 1172
BsmAI	GTCTC	5 cut(s)	293, 353, 358, 619, 1189
BsmBI	CGTCTC	3 cut(s)	293, 353, 358
BsmFI	GGGAC	4 cut(s)	112, 1405, 1447, 1612
BsnI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 565, 785, 1079
Bso31I	GGTCTC	2 cut(s)	619, 1189
BsoBI	CYCGRG	3 cut(s)	123, 136, 961
Bsp119I	TTCGAA	1 cut(s)	1644
Bsp1286I	GDGCHC	4 cut(s)	62, 124, 267, 375
Bsp143I	GATC	4 cut(s)	114, 201, 334, 1264
Bsp1720I	GCTNAGC	1 cut(s)	56
Bsp68I	TCGCGA	1 cut(s)	113
BspANI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 565, 785, 1079
BspCNI	CTCAG	9 cut(s)	48, 289, 322, 475, 664, 826, 862, 901, 1588
BspFNI	CGCG	2 cut(s)	113, 227
BspLI	GGNNCC	2 cut(s)	100, 148
BspMAI	CTGCAG	2 cut(s)	552, 579
BspMI	ACCTGC	1 cut(s)	99
BspPI	GGATC	3 cut(s)	109, 209, 1259
BspT104I	TTCGAA	1 cut(s)	1644
BspT107I	GGYRCC	1 cut(s)	146
BspTNI	GGTCTC	2 cut(s)	619, 1189
BsrBI	CCGCTC	2 cut(s)	38, 49
BsrFI	RCCGGY	1 cut(s)	785
BsrI	ACTGG	7 cut(s)	224, 243, 746, 1139, 1269, 1443, 1470
BssAI	RCCGGY	1 cut(s)	785
BssECI	CCNNGG	4 cut(s)	137, 168, 357, 761
BssMI	GATC	4 cut(s)	114, 201, 334, 1264
BssNI	GRCGYC	2 cut(s)	147, 1245
BssSI	CACGAG	1 cut(s)	266
BssT1I	CCWWGG	1 cut(s)	761
Bst2BI	CACGAG	1 cut(s)	266
Bst2UI	CCWGG	1 cut(s)	364
Bst4CI	ACNGT	5 cut(s)	284, 370, 588, 941, 1001
Bst6I	CTCTTC	2 cut(s)	772, 1310
BstACI	GRCGYC	2 cut(s)	147, 1245
BstAPI	GCANNNNNTGC	2 cut(s)	484, 574
BstBAI	YACGTR	1 cut(s)	86
BstBI	TTCGAA	1 cut(s)	1644
BstC8I	GCNNGC	6 cut(s)	495, 579, 897, 931, 1162, 1569
BstDSI	CCRYGG	1 cut(s)	168
BstF5I	GGATG	1 cut(s)	1454
BstFNI	CGCG	2 cut(s)	113, 227
BstH2I	RGCGCY	1 cut(s)	150
BstHHI	GCGC	1 cut(s)	149
BstKTI	GATC	4 cut(s)	117, 204, 337, 1267
BstMAI	GTCTC	5 cut(s)	293, 353, 358, 619, 1189
BstMBI	GATC	4 cut(s)	114, 201, 334, 1264
BstMCI	CGRYCG	1 cut(s)	566
BstNI	CCWGG	1 cut(s)	364
BstNSI	RCATGY	3 cut(s)	497, 933, 1571
BstSCI	CCNGG	5 cut(s)	362, 425, 452, 911, 1171
BstSFI	CTRYAG	2 cut(s)	548, 575
BstSLI	GKGCMC	1 cut(s)	124
BstUI	CGCG	2 cut(s)	113, 227
BstV2I	GAAGAC	2 cut(s)	1333, 1484
BstZI	CGGCCG	1 cut(s)	563
Bsu36I	CCTNAGG	1 cut(s)	309
BsuRI	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 565, 785, 1079
BtgI	CCRYGG	1 cut(s)	168
BtsCI	GGATG	1 cut(s)	1454
BtsI	GCAGTG	1 cut(s)	1702
BtsIMutI	CAGTG	4 cut(s)	753, 1276, 1436, 1702
BtuMI	TCGCGA	1 cut(s)	113
BveI	ACCTGC	1 cut(s)	99
Cac8I	GCNNGC	6 cut(s)	495, 579, 897, 931, 1162, 1569
CaiI	CAGNNNCTG	2 cut(s)	547, 574
CciNI	GCGGCCGC	1 cut(s)	563
CfoI	GCGC	1 cut(s)	149
Cfr10I	RCCGGY	1 cut(s)	785
Cfr13I	GGNCC	5 cut(s)	99, 241, 366, 394, 1077
CseI	GACGC	1 cut(s)	1253
Csp6I	GTAC	5 cut(s)	223, 280, 882, 958, 1176
CviAII	CATG	5 cut(s)	494, 930, 1016, 1417, 1568
CviQI	GTAC	5 cut(s)	223, 280, 882, 958, 1176
DinI	GGCGCC	1 cut(s)	148
DpnI	GATC	4 cut(s)	116, 203, 336, 1266
DpnII	GATC	4 cut(s)	114, 201, 334, 1264
DraIII	CACNNNGTG	1 cut(s)	1442
EaeI	YGGCCR	3 cut(s)	171, 563, 783
EagI	CGGCCG	1 cut(s)	563
Eam1104I	CTCTTC	2 cut(s)	772, 1310
EarI	CTCTTC	2 cut(s)	772, 1310
EciI	GGCGGA	2 cut(s)	432, 914
Ecl136II	GAGCTC	1 cut(s)	265
EclXI	CGGCCG	1 cut(s)	563
Eco130I	CCWWGG	1 cut(s)	761
Eco147I	AGGCCT	2 cut(s)	341, 362
Eco24I	GRGCYC	1 cut(s)	267
Eco31I	GGTCTC	2 cut(s)	619, 1189
Eco32I	GATATC	1 cut(s)	1029
Eco47I	GGWCC	2 cut(s)	99, 366
Eco52I	CGGCCG	1 cut(s)	563
Eco53kI	GAGCTC	1 cut(s)	265
Eco57I	CTGAAG	1 cut(s)	542
Eco72I	CACGTG	1 cut(s)	86
Eco81I	CCTNAGG	1 cut(s)	309
Eco88I	CYCGRG	3 cut(s)	123, 136, 961
EcoICRI	GAGCTC	1 cut(s)	265
EcoO109I	RGGNCCY	1 cut(s)	394
EcoRII	CCWGG	1 cut(s)	362
EcoRV	GATATC	1 cut(s)	1029
EcoT14I	CCWWGG	1 cut(s)	761
EcoT22I	ATGCAT	1 cut(s)	495
EcoT38I	GRGCYC	1 cut(s)	267
EgeI	GGCGCC	1 cut(s)	148
EheI	GGCGCC	1 cut(s)	148
ErhI	CCWWGG	1 cut(s)	761
Esp3I	CGTCTC	3 cut(s)	293, 353, 358
FaeI	CATG	5 cut(s)	497, 933, 1019, 1420, 1571
FaqI	GGGAC	4 cut(s)	112, 1405, 1447, 1612
FatI	CATG	5 cut(s)	493, 929, 1015, 1416, 1567
FokI	GGATG	1 cut(s)	1441
FriOI	GRGCYC	1 cut(s)	267
FspBI	CTAG	2 cut(s)	1353, 1488
GlaI	GCGC	1 cut(s)	148
GsaI	CCCAGC	2 cut(s)	146, 1078
HaeII	RGCGCY	1 cut(s)	150
HaeIII	GGCC	9 cut(s)	173, 242, 314, 341, 362, 395, 565, 785, 1079
HapII	CCGG	6 cut(s)	189, 427, 453, 786, 912, 1172
HgaI	GACGC	1 cut(s)	1253
HhaI	GCGC	1 cut(s)	149
Hin1I	GRCGYC	2 cut(s)	147, 1245
Hin1II	CATG	5 cut(s)	497, 933, 1019, 1420, 1571
Hin6I	GCGC	1 cut(s)	147
HinP1I	GCGC	1 cut(s)	147
HincII	GTYRAC	1 cut(s)	459
HindII	GTYRAC	1 cut(s)	459
HindIII	AAGCTT	1 cut(s)	1341
HpaII	CCGG	6 cut(s)	189, 427, 453, 786, 912, 1172
HphI	GGTGA	5 cut(s)	705, 800, 938, 1036, 1432
Hpy166II	GTNNAC	3 cut(s)	459, 1048, 1228
Hpy188III	TCNNGA	7 cut(s)	112, 922, 963, 1253, 1353, 1652, 1663
Hpy8I	GTNNAC	3 cut(s)	459, 1048, 1228
Hpy99I	CGWCG	2 cut(s)	288, 1238
HpyAV	CCTTC	8 cut(s)	305, 352, 385, 763, 1291, 1381, 1622, 1640
HpyCH4III	ACNGT	5 cut(s)	284, 370, 588, 941, 1001
HpyCH4IV	ACGT	1 cut(s)	85
HpySE526I	ACGT	1 cut(s)	85
Hsp92I	GRCGYC	2 cut(s)	147, 1245
Hsp92II	CATG	5 cut(s)	497, 933, 1019, 1420, 1571
HspAI	GCGC	1 cut(s)	147
KasI	GGCGCC	1 cut(s)	146
Kzo9I	GATC	4 cut(s)	114, 201, 334, 1264
LmnI	GCTCC	3 cut(s)	46, 186, 1564
LweI	GCATC	1 cut(s)	1463
MaeI	CTAG	2 cut(s)	1353, 1488
MaeII	ACGT	1 cut(s)	85
MaeIII	GTNAC	4 cut(s)	86, 195, 829, 1697
MalI	GATC	4 cut(s)	116, 203, 336, 1266
MbiI	CCGCTC	2 cut(s)	38, 49
MboI	GATC	4 cut(s)	114, 201, 334, 1264
MboII	GAAGA	9 cut(s)	224, 778, 789, 1195, 1324, 1327, 1338, 1489, 1633
MhlI	GDGCHC	4 cut(s)	62, 124, 267, 375
MluCI	AATT	5 cut(s)	599, 916, 1063, 1523, 1714
Mly113I	GGCGCC	1 cut(s)	147
MmeI	TCCRAC	1 cut(s)	156
Mph1103I	ATGCAT	1 cut(s)	495
MroXI	GAANNNNTTC	1 cut(s)	1342
MseI	TTAA	2 cut(s)	1110, 1382
MslI	CAYNNNNRTG	1 cut(s)	65
MspA1I	CMGCKG	5 cut(s)	514, 544, 562, 574, 854
MspI	CCGG	6 cut(s)	189, 427, 453, 786, 912, 1172
MspR9I	CCNGG	5 cut(s)	364, 427, 454, 913, 1173
MvaI	CCWGG	1 cut(s)	364
MvnI	CGCG	2 cut(s)	113, 227
NarI	GGCGCC	1 cut(s)	147
NciI	CCSGG	4 cut(s)	427, 454, 913, 1173
NdeII	GATC	4 cut(s)	114, 201, 334, 1264
NlaIII	CATG	5 cut(s)	497, 933, 1019, 1420, 1571
NlaIV	GGNNCC	2 cut(s)	100, 148
NmuCI	GTSAC	4 cut(s)	86, 195, 829, 1697
NotI	GCGGCCGC	1 cut(s)	563
NruI	TCGCGA	1 cut(s)	113
NsiI	ATGCAT	1 cut(s)	495
NspI	RCATGY	3 cut(s)	497, 933, 1571
NspV	TTCGAA	1 cut(s)	1644
OliI	CACNNNNGTG	1 cut(s)	65
PaeI	GCATGC	3 cut(s)	497, 933, 1571
PaeR7I	CTCGAG	1 cut(s)	961
PceI	AGGCCT	2 cut(s)	341, 362
PcsI	WCGNNNNNNNCGW	1 cut(s)	171
PdmI	GAANNNNTTC	1 cut(s)	1342
PfeI	GAWTC	4 cut(s)	805, 908, 1277, 1466
PflMI	CCANNNNNTGG	1 cut(s)	1021
PfoI	TCCNGGA	1 cut(s)	911
PluTI	GGCGCC	1 cut(s)	150
PmaCI	CACGTG	1 cut(s)	86
PmlI	CACGTG	1 cut(s)	86
Ppu21I	YACGTR	1 cut(s)	86
Psp124BI	GAGCTC	1 cut(s)	267
Psp6I	CCWGG	1 cut(s)	362
PspCI	CACGTG	1 cut(s)	86
PspFI	CCCAGC	2 cut(s)	142, 1074
PspGI	CCWGG	1 cut(s)	362
PspN4I	GGNNCC	2 cut(s)	100, 148
PspPI	GGNCC	5 cut(s)	99, 241, 366, 394, 1077
PstI	CTGCAG	2 cut(s)	552, 579
PstNI	CAGNNNCTG	2 cut(s)	547, 574
PvuII	CAGCTG	2 cut(s)	574, 854
RruI	TCGCGA	1 cut(s)	113
RsaI	GTAC	5 cut(s)	224, 281, 883, 959, 1177
RsaNI	GTAC	5 cut(s)	223, 280, 882, 958, 1176
RseI	CAYNNNNRTG	1 cut(s)	65
SacI	GAGCTC	1 cut(s)	267
SaqAI	TTAA	2 cut(s)	1110, 1382
Sau3AI	GATC	4 cut(s)	114, 201, 334, 1264
Sau96I	GGNCC	5 cut(s)	99, 241, 366, 394, 1077
ScaI	AGTACT	1 cut(s)	959
ScrFI	CCNGG	5 cut(s)	364, 427, 454, 913, 1173
SduI	GDGCHC	4 cut(s)	62, 124, 267, 375
SfaNI	GCATC	1 cut(s)	1463
SfcI	CTRYAG	2 cut(s)	548, 575
SfoI	GGCGCC	1 cut(s)	148
Sfr274I	CTCGAG	1 cut(s)	961
SfuI	TTCGAA	1 cut(s)	1644
SinI	GGWCC	2 cut(s)	99, 366
SlaI	CTCGAG	1 cut(s)	961
SmiMI	CAYNNNNRTG	1 cut(s)	65
SmlI	CTYRAG	4 cut(s)	260, 617, 961, 1663
SmoI	CTYRAG	4 cut(s)	260, 617, 961, 1663
SphI	GCATGC	3 cut(s)	497, 933, 1571
Sse9I	AATT	5 cut(s)	599, 916, 1063, 1523, 1714
SseBI	AGGCCT	2 cut(s)	341, 362
SspDI	GGCGCC	1 cut(s)	146
SspI	AATATT	1 cut(s)	1624
SspMI	CTAG	2 cut(s)	1353, 1488
SstI	GAGCTC	1 cut(s)	267
StuI	AGGCCT	2 cut(s)	341, 362
StyD4I	CCNGG	5 cut(s)	362, 425, 452, 911, 1171
StyI	CCWWGG	1 cut(s)	761
TaaI	ACNGT	5 cut(s)	284, 370, 588, 941, 1001
TaiI	ACGT	1 cut(s)	88
TaqI	TCGA	4 cut(s)	432, 962, 1031, 1644
TasI	AATT	5 cut(s)	599, 916, 1063, 1523, 1714
TatI	WGTACW	2 cut(s)	881, 957
TfiI	GAWTC	4 cut(s)	805, 908, 1277, 1466
Tru1I	TTAA	2 cut(s)	1110, 1382
Tru9I	TTAA	2 cut(s)	1110, 1382
TscAI	CASTG	4 cut(s)	753, 1276, 1443, 1702
TseFI	GTSAC	4 cut(s)	86, 195, 829, 1697
Tsp45I	GTSAC	4 cut(s)	86, 195, 829, 1697
TspGWI	ACGGA	4 cut(s)	107, 214, 335, 789
TspRI	CASTG	4 cut(s)	753, 1276, 1443, 1702
Van91I	CCANNNNNTGG	1 cut(s)	1021
VpaK11BI	GGWCC	2 cut(s)	99, 366
XapI	RAATTY	2 cut(s)	916, 1063
XbaI	TCTAGA	1 cut(s)	1352
XceI	RCATGY	3 cut(s)	497, 933, 1571
XhoI	CTCGAG	1 cut(s)	961
XmnI	GAANNNNTTC	1 cut(s)	1342
XspI	CTAG	2 cut(s)	1353, 1488
ZrmI	AGTACT	1 cut(s)	959
Zsp2I	ATGCAT	1 cut(s)	495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.